Skip to main content
crop-pal logo
Maize
Search for another protein from :
Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, extracellular, cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, extracellular, mitochondrion, plastid
Any Predictor:cytosol, mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
 extracellular: 20408568
plastid: 23198870
mitochondrion: 27297264
msms PMID: 27297264 doi
D Dahal, KJ Newton, BP Mooney
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
msms PMID: 23198870 doi
M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk
Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.
msms PMID: 20408568 doi
W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li
Department of Plant Nutrition, China Agricultural University, Beijing, PR China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER89876 Sorghum cytosol 88.82 92.86
TraesCS7D01G333200.1 Wheat cytosol 76.4 78.34
TraesCS7A01G346000.1 Wheat cytosol 75.78 77.71
TraesCS7B01G237200.1 Wheat cytosol 75.78 77.71
Os06t0538900-01 Rice plastid 79.5 67.37
VIT_10s0003g03300.t01 Wine grape cytosol 52.8 57.05
PGSC0003DMT400054524 Potato cytosol 47.2 52.05
GSMUA_Achr10P... Banana cytosol 49.07 51.97
GSMUA_Achr10P... Banana cytosol 50.31 51.92
CDY43960 Canola cytosol 45.34 51.77
Bra022026.1-P Field mustard cytosol 45.34 51.77
Solyc02g070500.1.1 Tomato cytosol 47.2 51.7
Solyc08g016580.1.1 Tomato cytosol, extracellular 44.1 50.71
CDX87732 Canola cytosol 44.72 50.35
CDY33463 Canola cytosol 44.72 50.0
CDY62357 Canola cytosol 44.72 50.0
PGSC0003DMT400024987 Potato cytosol 43.48 50.0
Bra025029.1-P Field mustard cytosol 44.1 49.31
GSMUA_Achr7P13960_001 Banana cytosol 47.83 49.04
CDX90222 Canola cytosol 29.81 48.98
Bra010803.1-P Field mustard cytosol 29.81 48.98
AT5G46230.1 Thale cress cytosol 42.86 48.25
CDY35153 Canola cytosol 42.86 47.92
Bra017568.1-P Field mustard cytosol 42.86 47.92
Zm00001d002015_P001 Maize cytosol 41.61 46.85
Zm00001d002017_P001 Maize cytosol 41.61 46.85
Zm00001d018682_P001 Maize cytosol 40.99 46.15
Zm00001d002014_P001 Maize cytosol 40.99 45.83
Zm00001d002016_P001 Maize cytosol 40.99 45.83
KRH11189 Soybean cytosol 45.96 45.68
Zm00001d018683_P001 Maize cytosol 40.37 45.45
Zm00001d008910_P001 Maize cytosol 34.78 44.44
CDY35265 Canola cytosol 37.89 43.57
Zm00001d044034_P001 Maize cytosol 36.02 42.65
Zm00001d039083_P001 Maize cytosol 34.16 39.86
CDY03234 Canola plastid 42.86 39.2
Zm00001d030642_P001 Maize mitochondrion 27.95 37.82
Zm00001d052772_P001 Maize cytosol 37.27 35.29
Zm00001d032443_P001 Maize extracellular 39.75 34.78
AT1G30020.1 Thale cress cytosol 32.92 33.76
Zm00001d048649_P001 Maize cytosol 36.02 31.02
Zm00001d041578_P001 Maize cytosol, mitochondrion 42.86 30.8
Zm00001d002018_P001 Maize cytosol 41.61 28.51
Protein Annotations
EMBL:BT038249EMBL:EU960677EnsemblPlants:Zm00001d037018_P001EnsemblPlants:Zm00001d037018_T001EnsemblPlantsGene:Zm00001d037018EntrezGene:100276213
Gene3D:2.30.240.10InterPro:At5g01610-likeInterPro:DUF538InterPro:IPR036758PANTHER:PTHR31676PANTHER:PTHR31676:SF24
PFAM:PF04398ProteinID:AQK82674.1SEG:segSUPFAM:SSF141562UniParc:UPI00017B6C2CUniProt:B4FMB1
MapMan:35.2:::::
Description
DUF538 family protein
Coordinates
chr6:+:109291682..109292167
Molecular Weight (calculated)
17453.8 Da
IEP (calculated)
5.261
GRAVY (calculated)
-0.108
Length
161 amino acids
Sequence
(BLAST)
001: MSSQLIEEHR SGAEVHVGHE LCERKSREFM VELGLPDGLL PLPSLDEVGY NRSTGFVWLR QAAGLTHTFG SIGKQVWYDR EVTAFVEPGR MHGLAGVKSK
101: ELLIWVTISE IVLSPSGTKI VFRTPAGLGR AFPVTAFQLE PAAAEGDHKE EAEDAAAAAA N
Best Arabidopsis Sequence Match ( AT1G09310.1 )
(BLAST)
001: MGLVTEEVRA KAEMYTGDEI CREKTKCFLK EISMPNGLLP LKDIEEVGYD RESGVVWLKQ KKSITHKFTE IDKLVSYGTE VTAIVETGKI KKLTGVKAKE
101: LLIWVTINEI YTEEPPTKIT FKTPTTLSRT FPVTAFIVPE EPAKEEPAKE EPAKEKSSEA TEAKEAVAIK EAVAVKEAA
Arabidopsis Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q9ZPZ4]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.