Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS7D01G333200.1 | Wheat | cytosol | 98.09 | 98.09 |
TraesCS7A01G346000.1 | Wheat | cytosol | 98.09 | 98.09 |
EER89876 | Sorghum | cytosol | 75.16 | 76.62 |
Zm00001d037018_P001 | Maize | cytosol, extracellular, mitochondrion, plastid | 77.71 | 75.78 |
Os06t0538900-01 | Rice | plastid | 77.71 | 64.21 |
GSMUA_Achr10P... | Banana | cytosol | 54.78 | 55.13 |
VIT_10s0003g03300.t01 | Wine grape | cytosol | 52.23 | 55.03 |
TraesCS3B01G594700.1 | Wheat | cytosol | 52.23 | 54.67 |
TraesCS3B01G586600.1 | Wheat | cytosol | 40.76 | 54.24 |
TraesCS3B01G579600.1 | Wheat | cytosol | 50.96 | 53.33 |
TraesCS3B01G605800.1 | Wheat | cytosol | 51.59 | 53.29 |
TraesCS3B01G606500.1 | Wheat | cytosol | 52.23 | 53.25 |
TraesCS3B01G554700.1 | Wheat | cytosol | 50.32 | 53.02 |
PGSC0003DMT400054524 | Potato | cytosol | 49.04 | 52.74 |
TraesCS3B01G554600.1 | Wheat | cytosol | 50.32 | 52.67 |
TraesCS3B01G586700.1 | Wheat | cytosol | 50.32 | 52.67 |
GSMUA_Achr10P... | Banana | cytosol | 50.96 | 52.63 |
Solyc02g070500.1.1 | Tomato | cytosol | 49.04 | 52.38 |
GSMUA_Achr7P13960_001 | Banana | cytosol | 52.23 | 52.23 |
TraesCS3B01G167000.1 | Wheat | cytosol | 51.59 | 50.94 |
Solyc08g016580.1.1 | Tomato | cytosol, extracellular | 43.95 | 49.29 |
PGSC0003DMT400024987 | Potato | cytosol | 43.95 | 49.29 |
Bra010803.1-P | Field mustard | cytosol | 30.57 | 48.98 |
CDX90222 | Canola | cytosol | 30.57 | 48.98 |
TraesCS3B01G053600.1 | Wheat | cytosol | 45.22 | 48.97 |
Bra022026.1-P | Field mustard | cytosol | 43.95 | 48.94 |
CDY43960 | Canola | cytosol | 43.95 | 48.94 |
CDY62357 | Canola | cytosol | 44.59 | 48.61 |
CDY33463 | Canola | cytosol | 44.59 | 48.61 |
CDX87732 | Canola | cytosol | 43.95 | 48.25 |
Bra025029.1-P | Field mustard | cytosol | 43.95 | 47.92 |
KRH11189 | Soybean | cytosol | 47.77 | 46.3 |
AT5G46230.1 | Thale cress | cytosol | 41.4 | 45.45 |
CDY35153 | Canola | cytosol | 41.4 | 45.14 |
Bra017568.1-P | Field mustard | cytosol | 41.4 | 45.14 |
TraesCS4B01G349000.1 | Wheat | cytosol | 41.4 | 44.52 |
CDY35265 | Canola | cytosol | 39.49 | 44.29 |
TraesCS5B01G266900.1 | Wheat | cytosol | 39.49 | 43.97 |
TraesCS3B01G263900.1 | Wheat | cytosol | 37.58 | 43.38 |
TraesCS5B01G267500.1 | Wheat | cytosol | 36.94 | 42.03 |
TraesCS5B01G267600.1 | Wheat | cytosol | 34.39 | 40.3 |
CDY03234 | Canola | plastid | 42.04 | 37.5 |
TraesCS1B01G199500.1 | Wheat | cytosol | 40.13 | 37.28 |
AT1G30020.1 | Thale cress | cytosol | 34.39 | 34.39 |
TraesCS5B01G267400.1 | Wheat | cytosol | 36.31 | 34.13 |
TraesCS5B01G267700.1 | Wheat | cytosol | 21.02 | 33.67 |
TraesCS5B01G092500.1 | Wheat | cytosol | 40.13 | 29.44 |
Protein Annotations
EnsemblPlants:TraesCS7B01G237200.1 | EnsemblPlantsGene:TraesCS7B01G237200 | Gene3D:2.30.240.10 | InterPro:At5g01610-like | InterPro:DUF538 | InterPro:IPR036758 |
PANTHER:PTHR31676 | PANTHER:PTHR31676:SF24 | PFAM:PF04398 | SEG:seg | SUPFAM:SSF141562 | MapMan:35.2 |
Description
No Description!
Coordinates
chr7B:-:442023836..442024309
Molecular Weight (calculated)
16825.1 Da
IEP (calculated)
5.638
GRAVY (calculated)
-0.001
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MASQAIEEHR SGADVHTELC EARAREFLVE LGLPDGLLPL PSLVEVGYNR ATGFVWLRQG QSGGLTHTFD AIGKQVWYAP EVTAVVERGR MHSMTGVKSK
101: ELLIWVTISE IVISPSGSKI VFRTPAGLGR AFPVSAFQLS PPAPEGEAKA AEEAAAN
101: ELLIWVTISE IVISPSGSKI VFRTPAGLGR AFPVSAFQLS PPAPEGEAKA AEEAAAN
001: MGLVTDEVRA RAEKYTGDEI CREKTKEFLK EVSMPNGLLP LKDIEEVGYD RETGIVWLKQ KKSITHKFEA IGKLVSYATE VIAQVEVGKI KKLTGVKAKE
101: LLIWVTLNEL VLEQPTSSGK INFRTPTGLS RTFPVSAFVV PEVEKPATEK NNGTTEVKEA VAVTDA
101: LLIWVTLNEL VLEQPTSSGK INFRTPTGLS RTFPVSAFVV PEVEKPATEK NNGTTEVKEA VAVTDA
Arabidopsis Description
SVBAt1g56580/F25P12_18 [Source:UniProtKB/TrEMBL;Acc:Q9FXB0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.