CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0003g03300.t01	Wine grape	cytosol	57.41	62.42
Solyc02g070500.1.1	Tomato	cytosol	50.62	55.78
PGSC0003DMT400054524	Potato	cytosol	50.0	55.48
GSMUA_Achr10P...	Banana	cytosol	50.0	53.29
CDX90222	Canola	cytosol	32.1	53.06
Bra010803.1-P	Field mustard	cytosol	32.1	53.06
PGSC0003DMT400024987	Potato	cytosol	45.68	52.86
Solyc08g016580.1.1	Tomato	cytosol, extracellular	45.68	52.86
CDY33463	Canola	cytosol	46.91	52.78
CDY62357	Canola	cytosol	46.91	52.78
Bra022026.1-P	Field mustard	cytosol	45.68	52.48
CDY43960	Canola	cytosol	45.68	52.48
Bra025029.1-P	Field mustard	cytosol	46.3	52.08
GSMUA_Achr7P13960_001	Banana	cytosol	50.0	51.59
Bra017568.1-P	Field mustard	cytosol	45.06	50.69
CDX87732	Canola	cytosol	44.44	50.35
CDY35153	Canola	cytosol	44.44	50.0
GSMUA_Achr10P...	Banana	cytosol	48.15	50.0
TraesCS3B01G594700.1	Wheat	cytosol	46.3	50.0
TraesCS3B01G554700.1	Wheat	cytosol	45.68	49.66
AT5G46230.1	Thale cress	cytosol	43.83	49.65
EER89876	Sorghum	cytosol	46.91	49.35
TraesCSU01G231600.1	Wheat	cytosol	38.27	49.21
TraesCS3B01G606500.1	Wheat	cytosol	46.3	48.7
TraesCS3B01G605800.1	Wheat	cytosol	45.68	48.68
TraesCS3B01G579600.1	Wheat	cytosol	45.06	48.67
TraesCS3B01G586700.1	Wheat	cytosol	45.06	48.67
TraesCSU01G243200.1	Wheat	cytosol	45.06	48.67
TraesCS7A01G346000.1	Wheat	cytosol	46.91	48.41
TraesCS3D01G148700.1	Wheat	cytosol	44.44	48.32
TraesCS3A01G132500.1	Wheat	cytosol	44.44	48.32
TraesCS3B01G554600.1	Wheat	cytosol	44.44	48.0
CDY35265	Canola	cytosol	41.36	47.86
TraesCS7B01G237200.1	Wheat	cytosol	46.3	47.77
TraesCS7D01G333200.1	Wheat	cytosol	46.3	47.77
TraesCS3B01G586600.1	Wheat	cytosol	34.57	47.46
EES00076	Sorghum	cytosol	48.77	46.2
Zm00001d037018_P001	Maize	cytosol, extracellular, mitochondrion, plastid	45.68	45.96
TraesCS3D01G148900.1	Wheat	cytosol	45.06	45.91
Os01t0210600-02	Rice	cytosol, extracellular, plasma membrane, plastid	46.91	45.51
KRH68428	Soybean	cytosol	46.3	45.45
TraesCS3A01G132600.1	Wheat	cytosol	44.44	45.28
TraesCS3B01G053600.1	Wheat	cytosol	40.12	44.83
TraesCS3B01G167000.1	Wheat	cytosol	43.83	44.65
KRH33794	Soybean	cytosol	47.53	43.26
CDY03234	Canola	plastid	45.06	41.48
KRH50651	Soybean	cytosol	40.12	41.4
KRH27038	Soybean	cytosol	34.57	41.18
KRH02460	Soybean	cytosol	39.51	40.76
Os06t0538900-01	Rice	plastid	47.53	40.53
KRH22290	Soybean	cytosol	33.95	40.44
Zm00001d008910_P001	Maize	cytosol	30.86	39.68
AT1G30020.1	Thale cress	cytosol	37.65	38.85
KRH12720	Soybean	cytosol	36.42	36.88
KRH50684	Soybean	cytosol	37.04	36.59
KRH02405	Soybean	cytosol	37.04	36.59
HORVU3Hr1G028780.1	Barley	plastid	45.06	29.55

Protein Annotations

EMBL:ACUP02009187	EnsemblPlants:KRH11189	EnsemblPlantsGene:GLYMA_15G094200	EntrezGene:100810285	Gene3D:2.30.240.10	InterPro:At5g01610-like
InterPro:DUF538	InterPro:IPR036758	PANTHER:PTHR31676	PANTHER:PTHR31676:SF7	PFAM:PF04398	ProteinID:KRH11189
ProteinID:KRH11189.1	SEG:seg	SUPFAM:SSF141562	UniParc:UPI000233BD0C	UniProt:K7MAI5	MapMan:35.2

Description

hypothetical protein

Coordinates

chr15:+:7333261..7334062

Molecular Weight (calculated)

18619.1 Da

IEP (calculated)

6.726

GRAVY (calculated)

-0.469

Length

162 amino acids

Sequence
(BLAST)

001: MATAKIEHHR EEAEIYEGEA VCTQKSRLLL DEILLPRGLL PLENIVEMGY NRTTGFVWLK QRHKKEHRFA TIGRTVSYAT EVTAFVEEHR MRRVTGVKTK
101: ELFIWVSISE IFVDDPASGK ITFANSSGIA RSFPLSAFSL QEEHQQQQQE HDHAETYLST KS

Best Arabidopsis Sequence Match ( AT5G46230.1 )
(BLAST)

001: MSSQETKSDQ REGAEICNGE SNCKQKAKEI LSTMNLPKGL LPLDNMTEIG HNKSTGYVWI KIKNKVQHRF KAIGRNVSYD SEVTAILENR RMSQLTGIKS
101: KEILIWVTIS EIFVNHQDPT QITFANPTGL SRTFPVTAFE EDE

Arabidopsis Description

At5g46230 [Source:UniProtKB/TrEMBL;Acc:Q9FL37]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.