CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH27038	Soybean	cytosol	95.59	95.59
VIT_12s0028g02230.t01	Wine grape	cytosol	83.82	83.82
TraesCS3D01G236400.1	Wheat	cytosol	82.35	82.35
TraesCS3B01G263900.1	Wheat	cytosol	82.35	82.35
TraesCS3A01G236000.1	Wheat	cytosol	82.35	82.35
HORVU3Hr1G058820.1	Barley	cytosol	80.88	80.88
Zm00001d044034_P001	Maize	cytosol	80.88	80.88
EES01186	Sorghum	cytosol	80.15	80.15
Os01t0652700-00	Rice	cytosol	77.21	77.21
GSMUA_Achr2P20030_001	Banana	cytosol	76.47	75.91
Os05t0573600-00	Rice	cytosol	72.06	71.01
EES19980	Sorghum	cytosol	71.32	70.8
Zm00001d039083_P001	Maize	cytosol	70.59	69.57
KRH68428	Soybean	cytosol	47.06	38.79
KRH33794	Soybean	cytosol	50.0	38.2
KRH50651	Soybean	cytosol	41.18	35.67
KRH02460	Soybean	cytosol	41.18	35.67
KRH11189	Soybean	cytosol	40.44	33.95
KRH50684	Soybean	cytosol	38.97	32.32
KRH02405	Soybean	cytosol	38.97	32.32
KRH12720	Soybean	cytosol	36.76	31.25

Protein Annotations

EMBL:ACUP02008404	EnsemblPlants:KRH22290	EnsemblPlantsGene:GLYMA_13G291100	EntrezGene:100791850	Gene3D:2.30.240.10	InterPro:At5g01610-like
InterPro:DUF538	InterPro:IPR036758	PANTHER:PTHR31676	PANTHER:PTHR31676:SF21	PFAM:PF04398	ProteinID:KRH22290
ProteinID:KRH22290.1	SEG:seg	SUPFAM:SSF141562	UniParc:UPI000233BD6B	UniProt:I1M3M2	MapMan:35.2

Description

hypothetical protein

Coordinates

chr13:+:39133455..39133865

Molecular Weight (calculated)

15016.6 Da

IEP (calculated)

9.755

GRAVY (calculated)

-0.159

Length

136 amino acids

Sequence
(BLAST)

001: MAEKEGGVVK KGHEEGLKLA ASLLQEFELP EGLLPLADVI EVGYVKGTGY MWIVQKKKVE HEFKLISKLV SYDTEIKGYI SKKKIKKLKG VKAKELMLWP
101: PVSEITVDDP PTGKINFKSL AGITKTFPVE AFAAGQ

Best Arabidopsis Sequence Match ( AT5G46230.1 )
(BLAST)

001: MSSQETKSDQ REGAEICNGE SNCKQKAKEI LSTMNLPKGL LPLDNMTEIG HNKSTGYVWI KIKNKVQHRF KAIGRNVSYD SEVTAILENR RMSQLTGIKS
101: KEILIWVTIS EIFVNHQDPT QITFANPTGL SRTFPVTAFE EDE

Arabidopsis Description

At5g46230 [Source:UniProtKB/TrEMBL;Acc:Q9FL37]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.