Skip to main content
crop-pal logo
Maize
Search for another protein from :
Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • extracellular 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, extracellular, mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES01186 Sorghum cytosol 93.38 93.38
Os01t0652700-00 Rice cytosol 88.97 88.97
TraesCS3D01G236400.1 Wheat cytosol 88.97 88.97
TraesCS3B01G263900.1 Wheat cytosol 88.97 88.97
TraesCS3A01G236000.1 Wheat cytosol 88.97 88.97
HORVU3Hr1G058820.1 Barley cytosol 88.24 88.24
Os05t0573600-00 Rice cytosol 83.09 81.88
PGSC0003DMT400026439 Potato cytosol 81.62 81.62
KRH22290 Soybean cytosol 80.88 80.88
KRH27038 Soybean cytosol 79.41 79.41
VIT_10s0003g01210.t01 Wine grape cytosol 77.21 78.95
PGSC0003DMT400011191 Potato cytosol 78.68 78.68
PGSC0003DMT400090071 Potato cytosol 78.68 78.68
GSMUA_Achr2P20030_001 Banana cytosol 77.21 76.64
VIT_12s0028g02230.t01 Wine grape cytosol 76.47 76.47
Zm00001d039083_P001 Maize cytosol 77.21 76.09
Solyc03g006180.2.1 Tomato cytosol 41.18 71.79
PGSC0003DMT400026444 Potato cytosol 70.59 70.59
PGSC0003DMT400026443 Potato cytosol 63.24 63.24
PGSC0003DMT400026442 Potato cytosol 63.24 63.24
PGSC0003DMT400026441 Potato cytosol 62.5 62.5
Solyc02g076890.1.1 Tomato cytosol 61.76 61.76
Zm00001d002015_P001 Maize cytosol 47.06 44.76
Zm00001d002017_P001 Maize cytosol 47.06 44.76
Zm00001d018682_P001 Maize cytosol 46.32 44.06
Zm00001d002014_P001 Maize cytosol 46.32 43.75
Zm00001d002016_P001 Maize cytosol 46.32 43.75
Zm00001d018683_P001 Maize cytosol 45.59 43.36
Zm00001d030642_P001 Maize mitochondrion 36.03 41.18
Zm00001d052772_P001 Maize cytosol 50.74 40.59
Zm00001d037018_P001 Maize cytosol, extracellular, mitochondrion, plastid 42.65 36.02
Zm00001d048649_P001 Maize cytosol 48.53 35.29
Zm00001d008910_P001 Maize cytosol 32.35 34.92
Zm00001d041578_P001 Maize cytosol, mitochondrion 50.0 30.36
Zm00001d032443_P001 Maize extracellular 40.44 29.89
Zm00001d002018_P001 Maize cytosol 46.32 26.81
Protein Annotations
EnsemblPlants:Zm00001d044034_P001EnsemblPlants:Zm00001d044034_T001EnsemblPlantsGene:Zm00001d044034EntrezGene:103651416Gene3D:2.30.240.10InterPro:At5g01610-like
InterPro:DUF538InterPro:IPR036758PANTHER:PTHR31676PANTHER:PTHR31676:SF21PFAM:PF04398ProteinID:ONM39809.1
SEG:segSUPFAM:SSF141562UniParc:UPI0002220F0DUniProt:A0A1D6NHE9MapMan:35.2:
Description
DUF538 family protein
Coordinates
chr3:-:217295175..217295784
Molecular Weight (calculated)
14919.5 Da
IEP (calculated)
10.102
GRAVY (calculated)
-0.009
Length
136 amino acids
Sequence
(BLAST)
001: MAERAGGVVK KGHEEGLKMA VSLLEEFGLP LGLLPLADVI EVGFVRATGY MWIAQRKKVE HQFKLVGKQV SYDVEVTGYV SARRIKKLKG VKAKELMLWP
101: PVNEITVDDP PTGKIHFKSL AGVTKTFPVE AFAAGQ
Best Arabidopsis Sequence Match ( AT4G24130.1 )
(BLAST)
001: MASEGVVVVG GEREGAEIVY GAEECYKQSL ELLEELGFPK GVMPLKNLVE CGRVRATGYV WMKQDTPYEH FFEATNTRVS YGLEVTAYVD KCCMKKMTGV
101: KSKQMFLWVP IVEMSMEEPK SKKIYFKTPM GIGRSFPVTG FMDEEEKRNF YLENPKN
Arabidopsis Description
T19F6.7 protein [Source:UniProtKB/TrEMBL;Acc:O22978]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.