Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G148900.1 | Wheat | cytosol | 98.11 | 98.11 |
| TraesCS3A01G132600.1 | Wheat | cytosol | 95.6 | 95.6 |
| TraesCS3A01G132500.1 | Wheat | cytosol | 88.68 | 94.63 |
| TraesCS3B01G594700.1 | Wheat | cytosol | 78.62 | 83.33 |
| TraesCS3B01G579600.1 | Wheat | cytosol | 78.62 | 83.33 |
| TraesCS3B01G554700.1 | Wheat | cytosol | 77.99 | 83.22 |
| TraesCS3B01G586700.1 | Wheat | cytosol | 77.36 | 82.0 |
| TraesCS3B01G606500.1 | Wheat | cytosol | 79.25 | 81.82 |
| TraesCS3B01G586600.1 | Wheat | cytosol | 60.38 | 81.36 |
| TraesCS3B01G554600.1 | Wheat | cytosol | 76.73 | 81.33 |
| TraesCS3B01G605800.1 | Wheat | cytosol | 76.73 | 80.26 |
| TraesCS3B01G053600.1 | Wheat | cytosol | 71.07 | 77.93 |
| Os01t0210600-02 | Rice | cytosol, extracellular, plasma membrane, plastid | 77.99 | 74.25 |
| EES00076 | Sorghum | cytosol | 76.73 | 71.34 |
| Zm00001d008910_P001 | Maize | cytosol | 50.31 | 63.49 |
| GSMUA_Achr10P... | Banana | cytosol | 61.01 | 62.18 |
| GSMUA_Achr10P... | Banana | cytosol | 58.49 | 61.18 |
| GSMUA_Achr7P13960_001 | Banana | cytosol | 60.38 | 61.15 |
| HORVU3Hr1G028780.1 | Barley | plastid | 94.34 | 60.73 |
| PGSC0003DMT400054524 | Potato | cytosol | 52.2 | 56.85 |
| Solyc02g070500.1.1 | Tomato | cytosol | 52.2 | 56.46 |
| CDX90222 | Canola | cytosol | 34.59 | 56.12 |
| Bra010803.1-P | Field mustard | cytosol | 34.59 | 56.12 |
| Solyc08g016580.1.1 | Tomato | cytosol, extracellular | 49.06 | 55.71 |
| VIT_10s0003g03300.t01 | Wine grape | cytosol | 52.2 | 55.7 |
| PGSC0003DMT400024987 | Potato | cytosol | 48.43 | 55.0 |
| CDY35265 | Canola | cytosol | 46.54 | 52.86 |
| TraesCS7B01G237200.1 | Wheat | cytosol | 50.94 | 51.59 |
| CDY62357 | Canola | cytosol | 45.91 | 50.69 |
| Bra022026.1-P | Field mustard | cytosol | 44.65 | 50.35 |
| CDY43960 | Canola | cytosol | 44.65 | 50.35 |
| CDY33463 | Canola | cytosol | 45.28 | 50.0 |
| Bra025029.1-P | Field mustard | cytosol | 44.65 | 49.31 |
| AT5G46230.1 | Thale cress | cytosol | 44.03 | 48.95 |
| CDX87732 | Canola | cytosol | 44.03 | 48.95 |
| TraesCS5B01G267500.1 | Wheat | cytosol | 42.14 | 48.55 |
| CDY35153 | Canola | cytosol | 43.4 | 47.92 |
| TraesCS5B01G266900.1 | Wheat | cytosol | 42.14 | 47.52 |
| Bra017568.1-P | Field mustard | cytosol | 42.77 | 47.22 |
| TraesCS5B01G267700.1 | Wheat | cytosol | 28.3 | 45.92 |
| TraesCS4B01G349000.1 | Wheat | cytosol | 42.14 | 45.89 |
| TraesCS5B01G267600.1 | Wheat | cytosol | 37.11 | 44.03 |
| KRH11189 | Soybean | cytosol | 44.65 | 43.83 |
| TraesCS5B01G267400.1 | Wheat | cytosol | 42.77 | 40.72 |
| TraesCS3B01G263900.1 | Wheat | cytosol | 34.59 | 40.44 |
| AT1G30020.1 | Thale cress | cytosol | 39.62 | 40.13 |
| CDY03234 | Canola | plastid | 43.4 | 39.2 |
| TraesCS1B01G199500.1 | Wheat | cytosol | 38.36 | 36.09 |
| TraesCS5B01G092500.1 | Wheat | cytosol | 44.65 | 33.18 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G167000.1 | EnsemblPlantsGene:TraesCS3B01G167000 | Gene3D:2.30.240.10 | InterPro:At5g01610-like | InterPro:DUF538 | InterPro:IPR036758 |
| PANTHER:PTHR31676 | PANTHER:PTHR31676:SF7 | PFAM:PF04398 | SEG:seg | SUPFAM:SSF141562 | MapMan:35.2 |
Description
No Description!
Coordinates
chr3B:-:166753906..166754610
Molecular Weight (calculated)
17442.1 Da
IEP (calculated)
7.413
GRAVY (calculated)
-0.231
Length
159 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQAIEAQSE GAEVYHGAAL CAEKAVELLA ETNMPLGLLP LADIEEVGYN RATGFVWLRQ KKALTHTFKQ IGRQVSYGTE VTAFVEDRKM KRMTGVKSKE
101: LLIWITLCDM YIEKDDPSKI TFKTPTGLGR TFPVSAFEKQ DDGKAKAAAA DGKEAVVAK
101: LLIWITLCDM YIEKDDPSKI TFKTPTGLGR TFPVSAFEKQ DDGKAKAAAA DGKEAVVAK
001: MSSQETKSDQ REGAEICNGE SNCKQKAKEI LSTMNLPKGL LPLDNMTEIG HNKSTGYVWI KIKNKVQHRF KAIGRNVSYD SEVTAILENR RMSQLTGIKS
101: KEILIWVTIS EIFVNHQDPT QITFANPTGL SRTFPVTAFE EDE
101: KEILIWVTIS EIFVNHQDPT QITFANPTGL SRTFPVTAFE EDE
Arabidopsis Description
At5g46230 [Source:UniProtKB/TrEMBL;Acc:Q9FL37]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.