Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022026.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDX87732 | Canola | cytosol | 91.49 | 90.21 |
| AT5G46230.1 | Thale cress | cytosol | 81.56 | 80.42 |
| CDY33463 | Canola | cytosol | 80.85 | 79.17 |
| CDY35153 | Canola | cytosol | 80.85 | 79.17 |
| CDY62357 | Canola | cytosol | 80.14 | 78.47 |
| CDY03234 | Canola | plastid | 80.85 | 64.77 |
| Solyc08g016580.1.1 | Tomato | cytosol, extracellular | 61.7 | 62.14 |
| PGSC0003DMT400024987 | Potato | cytosol | 59.57 | 60.0 |
| CDX90222 | Canola | cytosol | 39.01 | 56.12 |
| Solyc02g070500.1.1 | Tomato | cytosol | 58.16 | 55.78 |
| VIT_10s0003g03300.t01 | Wine grape | cytosol | 58.87 | 55.7 |
| PGSC0003DMT400054524 | Potato | cytosol | 56.74 | 54.79 |
| CDY35265 | Canola | cytosol | 50.35 | 50.71 |
| EER89876 | Sorghum | cytosol | 54.61 | 50.0 |
| TraesCSU01G231600.1 | Wheat | cytosol | 43.97 | 49.21 |
| TraesCS3B01G586700.1 | Wheat | cytosol | 51.77 | 48.67 |
| TraesCS3B01G605800.1 | Wheat | cytosol | 51.77 | 48.03 |
| TraesCS3B01G594700.1 | Wheat | cytosol | 51.06 | 48.0 |
| TraesCS3A01G132500.1 | Wheat | cytosol | 50.35 | 47.65 |
| TraesCS3B01G554700.1 | Wheat | cytosol | 50.35 | 47.65 |
| TraesCS3B01G579600.1 | Wheat | cytosol | 50.35 | 47.33 |
| TraesCSU01G243200.1 | Wheat | cytosol | 50.35 | 47.33 |
| TraesCS3D01G148700.1 | Wheat | cytosol | 49.65 | 46.98 |
| TraesCS3B01G606500.1 | Wheat | cytosol | 51.06 | 46.75 |
| TraesCS3B01G554600.1 | Wheat | cytosol | 49.65 | 46.67 |
| GSMUA_Achr7P13960_001 | Banana | cytosol | 51.77 | 46.5 |
| TraesCS3B01G053600.1 | Wheat | cytosol | 47.52 | 46.21 |
| GSMUA_Achr10P... | Banana | cytosol | 51.06 | 46.15 |
| GSMUA_Achr10P... | Banana | cytosol | 49.65 | 46.05 |
| TraesCS3A01G132600.1 | Wheat | cytosol | 51.77 | 45.91 |
| KRH11189 | Soybean | cytosol | 52.48 | 45.68 |
| Zm00001d037018_P001 | Maize | cytosol, extracellular, mitochondrion, plastid | 51.77 | 45.34 |
| TraesCS3D01G148900.1 | Wheat | cytosol | 51.06 | 45.28 |
| CDY57268 | Canola | cytosol | 46.1 | 45.14 |
| CDX93512 | Canola | cytosol | 44.68 | 44.68 |
| TraesCS3B01G167000.1 | Wheat | cytosol | 50.35 | 44.65 |
| TraesCS7A01G346000.1 | Wheat | cytosol | 49.65 | 44.59 |
| Zm00001d008910_P001 | Maize | cytosol | 39.72 | 44.44 |
| CDY04373 | Canola | cytosol | 45.39 | 44.44 |
| TraesCS3B01G586600.1 | Wheat | cytosol | 36.88 | 44.07 |
| TraesCS7D01G333200.1 | Wheat | cytosol | 48.94 | 43.95 |
| TraesCS7B01G237200.1 | Wheat | cytosol | 48.94 | 43.95 |
| EES00076 | Sorghum | cytosol | 53.19 | 43.86 |
| CDY41704 | Canola | cytosol | 46.81 | 42.58 |
| CDX95276 | Canola | cytosol | 46.81 | 42.58 |
| Os01t0210600-02 | Rice | cytosol, extracellular, plasma membrane, plastid | 48.94 | 41.32 |
| CDY48399 | Canola | cytosol | 46.81 | 39.76 |
| CDY31099 | Canola | cytosol | 44.68 | 37.28 |
| CDY32168 | Canola | cytosol | 43.97 | 36.9 |
| CDX92616 | Canola | cytosol | 39.01 | 35.03 |
| CDY10988 | Canola | cytosol | 39.01 | 35.03 |
| Os06t0538900-01 | Rice | plastid | 46.81 | 34.74 |
| CDY34258 | Canola | cytosol | 38.3 | 34.39 |
| CDY03486 | Canola | cytosol | 37.59 | 33.76 |
| HORVU3Hr1G028780.1 | Barley | plastid | 53.19 | 30.36 |
| CDY05614 | Canola | cytosol | 34.75 | 29.34 |
| CDY33893 | Canola | cytosol | 34.04 | 28.57 |
| CDX85421 | Canola | cytosol | 34.04 | 28.24 |
| CDX86223 | Canola | cytosol | 34.04 | 28.07 |
Protein Annotations
| EnsemblPlants:CDY43960 | EnsemblPlantsGene:GSBRNA2T00079343001 | Gene3D:2.30.240.10 | InterPro:At5g01610-like | InterPro:DUF538 | InterPro:IPR036758 |
| PANTHER:PTHR31676 | PANTHER:PTHR31676:SF7 | PFAM:PF04398 | ProteinID:CDY43960 | ProteinID:CDY43960.1 | SUPFAM:SSF141562 |
| UniParc:UPI0002545D65 | UniProt:A0A078HZC4 | MapMan:35.2 | : | : | : |
Description
BnaA02g24380DBnaA02g24380D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HZC4]
Coordinates
chrLK032575:-:47332..47757
Molecular Weight (calculated)
15900.1 Da
IEP (calculated)
9.816
GRAVY (calculated)
-0.406
Length
141 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSQETKSDQ RKGAEIFNGV SICKQKAHEI LSNMNLPKGL LPLDTMTEIG FNKSTGYFWI KMKNKVQHKF KSIGKNVSYD SEVTAFVENR RMRSLTGVKS
101: KELLIWVTIS EIFVDDQDPT KITFAGPSGL SRSFPVSAFE E
101: KELLIWVTIS EIFVDDQDPT KITFAGPSGL SRSFPVSAFE E
001: MSSQETKSDQ REGAEICNGE SNCKQKAKEI LSTMNLPKGL LPLDNMTEIG HNKSTGYVWI KIKNKVQHRF KAIGRNVSYD SEVTAILENR RMSQLTGIKS
101: KEILIWVTIS EIFVNHQDPT QITFANPTGL SRTFPVTAFE EDE
101: KEILIWVTIS EIFVNHQDPT QITFANPTGL SRTFPVTAFE EDE
Arabidopsis Description
At5g46230 [Source:UniProtKB/TrEMBL;Acc:Q9FL37]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.