Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- peroxisome 1
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | cytosol | 84.68 | 81.03 |
| GSMUA_AchrUn_... | Banana | cytosol | 69.37 | 67.54 |
| GSMUA_AchrUn_... | Banana | cytosol | 69.37 | 67.54 |
| GSMUA_AchrUn_... | Banana | cytosol | 68.47 | 66.67 |
| GSMUA_Achr7P26210_001 | Banana | cytosol | 74.77 | 58.45 |
| GSMUA_Achr7P26220_001 | Banana | cytosol | 73.87 | 57.75 |
| GSMUA_Achr7P26230_001 | Banana | cytosol | 73.87 | 57.75 |
| GSMUA_Achr9P04160_001 | Banana | cytosol | 73.87 | 57.34 |
| GSMUA_AchrUn_... | Banana | cytosol | 63.96 | 48.97 |
| GSMUA_Achr10P... | Banana | cytosol | 57.66 | 41.03 |
| GSMUA_Achr7P13960_001 | Banana | cytosol | 56.76 | 40.13 |
| GSMUA_Achr10P... | Banana | cytosol | 53.15 | 38.82 |
| GSMUA_Achr3P12720_001 | Banana | cytosol | 51.35 | 34.97 |
| GSMUA_Achr2P20030_001 | Banana | cytosol | 41.44 | 33.58 |
| GSMUA_Achr4P30400_001 | Banana | cytosol | 43.24 | 30.38 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P14140_001 | EnsemblPlants:GSMUA_Achr4T14140_001 | EnsemblPlantsGene:GSMUA_Achr4G14140_001 | Gene3D:2.30.240.10 | InterPro:At5g01610-like | InterPro:DUF538 |
| InterPro:IPR036758 | PANTHER:PTHR31676 | PANTHER:PTHR31676:SF26 | PFAM:PF04398 | SEG:seg | SUPFAM:SSF141562 |
| UniParc:UPI000295C40A | UniProt:M0SNS9 | MapMan:35.2 | : | : | : |
Description
DUF538 domain containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G14140_001]
Coordinates
chr4:+:10581211..10581639
Molecular Weight (calculated)
12430.2 Da
IEP (calculated)
9.725
GRAVY (calculated)
-0.206
Length
111 amino acids
Sequence
(BLAST)
(BLAST)
001: MASASIDSYR KGAMIYRGDT ICKRRSIELL EELGLPKGLK IKRQVSYAAE VTAFVEERKM KKMTGVKTKE LLLWLSVVEM YVDDPSSGKI TFKTGTGLSD
101: SFPVSAFELQ Q
101: SFPVSAFELQ Q
001: MSSQETKSDQ REGAEICNGE SNCKQKAKEI LSTMNLPKGL LPLDNMTEIG HNKSTGYVWI KIKNKVQHRF KAIGRNVSYD SEVTAILENR RMSQLTGIKS
101: KEILIWVTIS EIFVNHQDPT QITFANPTGL SRTFPVTAFE EDE
101: KEILIWVTIS EIFVNHQDPT QITFANPTGL SRTFPVTAFE EDE
Arabidopsis Description
At5g46230 [Source:UniProtKB/TrEMBL;Acc:Q9FL37]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.