Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- extracellular 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P26210_001 | Banana | cytosol | 98.59 | 98.59 |
| GSMUA_Achr7P26230_001 | Banana | cytosol | 98.59 | 98.59 |
| GSMUA_Achr9P04160_001 | Banana | cytosol | 76.76 | 76.22 |
| GSMUA_AchrUn_... | Banana | cytosol | 60.56 | 74.14 |
| GSMUA_Achr4P14140_001 | Banana | cytosol | 57.75 | 73.87 |
| GSMUA_AchrUn_... | Banana | cytosol | 57.75 | 71.93 |
| GSMUA_AchrUn_... | Banana | cytosol | 57.75 | 71.93 |
| GSMUA_AchrUn_... | Banana | cytosol | 57.04 | 71.05 |
| GSMUA_AchrUn_... | Banana | cytosol | 61.97 | 60.69 |
| GSMUA_Achr10P... | Banana | cytosol | 57.04 | 51.92 |
| GSMUA_Achr10P... | Banana | cytosol | 54.93 | 51.32 |
| GSMUA_Achr7P13960_001 | Banana | cytosol | 56.34 | 50.96 |
| GSMUA_Achr3P12720_001 | Banana | cytosol | 52.11 | 45.4 |
| GSMUA_Achr2P20030_001 | Banana | cytosol | 41.55 | 43.07 |
| GSMUA_Achr4P30400_001 | Banana | cytosol | 38.73 | 34.81 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr7P26220_001 | EnsemblPlants:GSMUA_Achr7T26220_001 | EnsemblPlantsGene:GSMUA_Achr7G26220_001 | Gene3D:2.30.240.10 | InterPro:At5g01610-like | InterPro:DUF538 |
| InterPro:IPR036758 | PANTHER:PTHR31676 | PANTHER:PTHR31676:SF26 | PFAM:PF04398 | SUPFAM:SSF141562 | UniParc:UPI00029581C7 |
| UniProt:M0TKV8 | MapMan:35.2 | : | : | : | : |
Description
Putative Cytoplasmic tRNA 2-thiolation protein 2 [Source:GMGC_GENE;Acc:GSMUA_Achr7G26220_001]
Coordinates
chr7:-:27578937..27579365
Molecular Weight (calculated)
16251.8 Da
IEP (calculated)
9.548
GRAVY (calculated)
-0.322
Length
142 amino acids
Sequence
(BLAST)
(BLAST)
001: MALHTIESHR HGAEVFTGDA LCRKKSIQLL QELELPRGLF PLEDIQEFGY NRAAGFIWLI QKKKNDHTFK KIKRAVSYAP EVTAFVEKRK MHRMTGVKTK
101: ELLLWLSVVE MRVEDPSTGK ITFKTGTGLS DSFPVSAFEL EE
101: ELLLWLSVVE MRVEDPSTGK ITFKTGTGLS DSFPVSAFEL EE
001: MALREMIIDE SDDIESYSDQ SLCLDKAKEL LALIKLPTGL LPLKDMTEVG YNKTKGFVWM RMRSKIEHTF REIGRRVLYD TEITAFVEDR RMRRLTGVKS
101: KELMIWVPVN DIFIKRKILR RSPLLIPPAC HEHLKFQHFN VRVDKLKEKR SNQTSLM
101: KELMIWVPVN DIFIKRKILR RSPLLIPPAC HEHLKFQHFN VRVDKLKEKR SNQTSLM
Arabidopsis Description
Uncharacterized protein T1P2.11 [Source:UniProtKB/TrEMBL;Acc:Q9C8R7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.