Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- extracellular 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P26210_001 | Banana | cytosol | 98.59 | 98.59 |
| GSMUA_Achr7P26220_001 | Banana | cytosol | 98.59 | 98.59 |
| GSMUA_Achr9P04160_001 | Banana | cytosol | 77.46 | 76.92 |
| GSMUA_AchrUn_... | Banana | cytosol | 61.27 | 75.0 |
| GSMUA_Achr4P14140_001 | Banana | cytosol | 57.75 | 73.87 |
| GSMUA_AchrUn_... | Banana | cytosol | 58.45 | 72.81 |
| GSMUA_AchrUn_... | Banana | cytosol | 58.45 | 72.81 |
| GSMUA_AchrUn_... | Banana | cytosol | 57.04 | 71.05 |
| GSMUA_AchrUn_... | Banana | cytosol | 62.68 | 61.38 |
| GSMUA_Achr10P... | Banana | cytosol | 55.63 | 50.64 |
| GSMUA_Achr10P... | Banana | cytosol | 53.52 | 50.0 |
| GSMUA_Achr7P13960_001 | Banana | cytosol | 54.93 | 49.68 |
| GSMUA_Achr3P12720_001 | Banana | cytosol | 52.82 | 46.01 |
| GSMUA_Achr2P20030_001 | Banana | cytosol | 42.25 | 43.8 |
| GSMUA_Achr4P30400_001 | Banana | cytosol | 39.44 | 35.44 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr7P26230_001 | EnsemblPlants:GSMUA_Achr7T26230_001 | EnsemblPlantsGene:GSMUA_Achr7G26230_001 | Gene3D:2.30.240.10 | InterPro:At5g01610-like | InterPro:DUF538 |
| InterPro:IPR036758 | PANTHER:PTHR31676 | PANTHER:PTHR31676:SF26 | PFAM:PF04398 | SUPFAM:SSF141562 | UniParc:UPI000296F646 |
| UniProt:M0TKV9 | MapMan:35.2 | : | : | : | : |
Description
DUF538 domain containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G26230_001]
Coordinates
chr7:+:27580425..27580853
Molecular Weight (calculated)
16249.8 Da
IEP (calculated)
9.530
GRAVY (calculated)
-0.280
Length
142 amino acids
Sequence
(BLAST)
(BLAST)
001: MALHTIEIHR HGAEVFTGDA LCRKKSIQLL QELELPRGLF PLEDIQEFGY NRAAGFIWLI QKKKNDHTFK KIKRAVSYAP EVTAFVEKRK MHKMTGVKTK
101: ELLLWLSVVE MRVEDPSTGK ITFKTGTGLS DSFPVSAFEL EE
101: ELLLWLSVVE MRVEDPSTGK ITFKTGTGLS DSFPVSAFEL EE
001: MGLVTEEVRA KAEMYTGDEI CREKTKCFLK EISMPNGLLP LKDIEEVGYD RESGVVWLKQ KKSITHKFTE IDKLVSYGTE VTAIVETGKI KKLTGVKAKE
101: LLIWVTINEI YTEEPPTKIT FKTPTTLSRT FPVTAFIVPE EPAKEEPAKE EPAKEKSSEA TEAKEAVAIK EAVAVKEAA
101: LLIWVTINEI YTEEPPTKIT FKTPTTLSRT FPVTAFIVPE EPAKEEPAKE EPAKEKSSEA TEAKEAVAIK EAVAVKEAA
Arabidopsis Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q9ZPZ4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.