Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | cytosol | 53.1 | 67.54 |
| GSMUA_AchrUn_... | Banana | cytosol | 52.41 | 66.67 |
| GSMUA_Achr9P04160_001 | Banana | cytosol | 65.52 | 66.43 |
| GSMUA_AchrUn_... | Banana | cytosol | 50.34 | 64.04 |
| GSMUA_Achr4P14140_001 | Banana | cytosol | 48.97 | 63.96 |
| GSMUA_Achr7P26210_001 | Banana | cytosol | 61.38 | 62.68 |
| GSMUA_Achr7P26230_001 | Banana | cytosol | 61.38 | 62.68 |
| GSMUA_Achr7P26220_001 | Banana | cytosol | 60.69 | 61.97 |
| GSMUA_AchrUn_... | Banana | cytosol | 48.28 | 60.34 |
| GSMUA_Achr10P... | Banana | cytosol | 53.79 | 50.0 |
| GSMUA_Achr10P... | Banana | cytosol | 52.41 | 50.0 |
| GSMUA_Achr7P13960_001 | Banana | cytosol | 53.1 | 49.04 |
| GSMUA_Achr3P12720_001 | Banana | cytosol | 51.72 | 46.01 |
| GSMUA_Achr2P20030_001 | Banana | cytosol | 37.93 | 40.15 |
| GSMUA_Achr4P30400_001 | Banana | cytosol | 35.86 | 32.91 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP07070_001 | EnsemblPlants:GSMUA_AchrUn_randomT07070_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG07070_001 | Gene3D:2.30.240.10 | InterPro:At5g01610-like | InterPro:DUF538 |
| InterPro:IPR036758 | PANTHER:PTHR31676 | PANTHER:PTHR31676:SF10 | PFAM:PF04398 | SEG:seg | SUPFAM:SSF141562 |
| UniParc:UPI00029690C7 | UniProt:M0U718 | MapMan:35.2 | : | : | : |
Description
DUF538 domain containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG07070_001]
Coordinates
chrchrUn_random:-:30683739..30684300
Molecular Weight (calculated)
16575.8 Da
IEP (calculated)
5.569
GRAVY (calculated)
-0.350
Length
145 amino acids
Sequence
(BLAST)
(BLAST)
001: MASQAIEHHR KGAEVYHGDD VCREKTMQLL RELGLPSGLL PLEDIEEVGY NHDDGFVWLT QKKKINHMFE EIKQLVSYAA EVTAFVEERK LKKITGVKAR
101: ELLIWFTVVE VCVNDHSSGK KITFRTSTGL SETFPESAFE IDLHD
101: ELLIWFTVVE VCVNDHSSGK KITFRTSTGL SETFPESAFE IDLHD
001: MVTEAMKAKA EVYHGDKTCR EKFGSLLSEI GLPNRLLSNK EIKECGYVKD TGFVWLKHKE KKKEDQKRRY QDLLRFDNVV VCFEDEVTAY FEPNRIKKLT
101: GVKAKEFMVW ISLGEIQVNR SSGLITFKTE VGLLSKSLPL SVFEDVHGDD HDLKEKPKKE LKLNKTKIYL Y
101: GVKAKEFMVW ISLGEIQVNR SSGLITFKTE VGLLSKSLPL SVFEDVHGDD HDLKEKPKKE LKLNKTKIYL Y
Arabidopsis Description
Similarity to unknown protein [Source:UniProtKB/TrEMBL;Acc:Q9FGY5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.