Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G244700.1 | Wheat | nucleus | 10.88 | 7.53 |
| TraesCS5D01G275300.1 | Wheat | nucleus | 11.4 | 7.05 |
| TraesCS1D01G405300.3 | Wheat | nucleus | 9.84 | 6.48 |
| TraesCS5D01G431900.1 | Wheat | nucleus | 10.88 | 2.82 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G432000.1 | EnsemblPlantsGene:TraesCS5D01G432000 | ncoils:Coil | PANTHER:PTHR36138 | PANTHER:PTHR36138:SF1 | SEG:seg |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5D:+:488355687..488356268
Molecular Weight (calculated)
21648.9 Da
IEP (calculated)
6.149
GRAVY (calculated)
-0.630
Length
193 amino acids
Sequence
(BLAST)
(BLAST)
001: MSMKITDVNM ETDALANHIN LLPMHSLNSS MKATDVNMEI EALANHIRLT RRGEGEGTDV GNKKTKKKIF RVPQEELDDI LSFQLPPAWP SLGKRCPSLV
101: GELEKMKESF LAEREKMRRE YQIMGYATYE AEVTDDDDDE EDTLVAIPAA TSFHGEKDDA AATSSPWIIP RGRGRKRFRP GVVKQASGVK KIT
101: GELEKMKESF LAEREKMRRE YQIMGYATYE AEVTDDDDDE EDTLVAIPAA TSFHGEKDDA AATSSPWIIP RGRGRKRFRP GVVKQASGVK KIT
001: MALKYHQQII SDLLEDSNGG LLILSSGLSL AKLIASLLIL HSPSQGTLLL LLSPAAQSLK SRIIHYISSL DSPTPTEITA DLPANQRYSL YTSGSPFFIT
101: PRILIVDLLT QRIPVSSLAG IFILNAHSIS ETSTEAFIIR IVKSLNSSAY IRAFSDRPQA MVSGFAKTER TMRALFLRKI HLWPRFQLDV SQELEREPPE
201: VVDIRVSMSN YMVGIQKAII EVMDACLKEM KKTNKVDVDD LTVESGLFKS FDEIVRRQLD PIWHTLGKRT KQLVSDLKTL RKLLDYLVRY DAVSFLKFLD
301: TLRVSESYRS VWLFAESSYK IFDFAKKRVY RLVKASDVKS KEHVKNKSGK KRNSKGETDS VEAVGGETAT NVATGVVVEE VLEEAPKWKV LREILEETQE
401: ERLKQAFSEE DNSDNNGIVL VACKDERSCM QLEDCITNNP QKVMREEWEM YLLSKIELRS MQTPQKKKQK TPKGFGILDG VVPVTTIQNS EGSSVGRQEH
501: EALMAAASSI RKLGKTTDMA SGNNNPEPHV DKASCTKGKA KKDPTSLRRS LRSCNKKTTN SKPEILPGPE NEEKANEAST SAPQEANAVR PSGAKKLPPV
601: HFYALESDQP ILDILKPSVI IVYHPDMGFV RELEVYKAEN PLRKLKVYFI FYDESTEVQK FEASIRRENE AFESLIRQKS SMIIPVDQDG LCMGSNSSTE
701: FPASSTQNSL TRKAGGRKEL EKETQVIVDM REFMSSLPNV LHQKGMKIIP VTLEVGDYIL SPSICVERKS IQDLFQSFTS GRLFHQVEMM SRYYRIPVLL
801: IEFSQDKSFS FQSSSDISDD VTPYNIISKL SLLVLHFPRL RLLWSRSLHA TAEIFTTLKS NQDEPDETRA IRVGVPSEEG IIENDIRAEN YNTSAVEFLR
901: RLPGVSDANY RSIMEKCKSL AELASLPVET LAELMGGHKV AKSLREFLDA KYPTLL
101: PRILIVDLLT QRIPVSSLAG IFILNAHSIS ETSTEAFIIR IVKSLNSSAY IRAFSDRPQA MVSGFAKTER TMRALFLRKI HLWPRFQLDV SQELEREPPE
201: VVDIRVSMSN YMVGIQKAII EVMDACLKEM KKTNKVDVDD LTVESGLFKS FDEIVRRQLD PIWHTLGKRT KQLVSDLKTL RKLLDYLVRY DAVSFLKFLD
301: TLRVSESYRS VWLFAESSYK IFDFAKKRVY RLVKASDVKS KEHVKNKSGK KRNSKGETDS VEAVGGETAT NVATGVVVEE VLEEAPKWKV LREILEETQE
401: ERLKQAFSEE DNSDNNGIVL VACKDERSCM QLEDCITNNP QKVMREEWEM YLLSKIELRS MQTPQKKKQK TPKGFGILDG VVPVTTIQNS EGSSVGRQEH
501: EALMAAASSI RKLGKTTDMA SGNNNPEPHV DKASCTKGKA KKDPTSLRRS LRSCNKKTTN SKPEILPGPE NEEKANEAST SAPQEANAVR PSGAKKLPPV
601: HFYALESDQP ILDILKPSVI IVYHPDMGFV RELEVYKAEN PLRKLKVYFI FYDESTEVQK FEASIRRENE AFESLIRQKS SMIIPVDQDG LCMGSNSSTE
701: FPASSTQNSL TRKAGGRKEL EKETQVIVDM REFMSSLPNV LHQKGMKIIP VTLEVGDYIL SPSICVERKS IQDLFQSFTS GRLFHQVEMM SRYYRIPVLL
801: IEFSQDKSFS FQSSSDISDD VTPYNIISKL SLLVLHFPRL RLLWSRSLHA TAEIFTTLKS NQDEPDETRA IRVGVPSEEG IIENDIRAEN YNTSAVEFLR
901: RLPGVSDANY RSIMEKCKSL AELASLPVET LAELMGGHKV AKSLREFLDA KYPTLL
Arabidopsis Description
UVH1Ultraviolet hypersensitive 1 [Source:UniProtKB/TrEMBL;Acc:Q2F6I1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.