Factsheet for TraesCS6A01G027000.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, plasma membrane, vacuole

Predictor Summary:

extracellular 5
golgi 4
plasma membrane 5
endoplasmic reticulum 4
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G030700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	96.76	94.95
TraesCS6B01G038200.1	Wheat	endoplasmic reticulum, extracellular	91.62	92.68
HORVU0Hr1G014960.1	Barley	cytosol, mitochondrion	71.62	81.21
Os02t0110000-01	Rice	endoplasmic reticulum, extracellular, vacuole	62.48	72.41
TraesCS7A01G003700.1	Wheat	extracellular, plasma membrane	43.81	52.15
TraesCS4A01G494900.1	Wheat	extracellular, plasma membrane, vacuole	43.43	50.44
KRH10966	Soybean	extracellular	27.62	40.73
Bra022002.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	26.1	39.71
KRH21335	Soybean	extracellular, golgi	27.43	39.67
CDX87749	Canola	extracellular	26.1	38.38
CDY50487	Canola	extracellular	26.1	38.38
AT5G45950.1	Thale cress	extracellular, plasma membrane	26.1	38.38
TraesCS3A01G007800.1	Wheat	endoplasmic reticulum, extracellular	25.71	38.35
PGSC0003DMT400027838	Potato	extracellular	25.33	37.15
Solyc02g077330.2.1	Tomato	extracellular, golgi	25.14	36.67
VIT_10s0003g00620.t01	Wine grape	mitochondrion	28.95	36.45
TraesCS5A01G164200.1	Wheat	extracellular	23.81	35.01
TraesCS5A01G167400.1	Wheat	endoplasmic reticulum, extracellular, vacuole	24.19	34.89
TraesCS3A01G351000.1	Wheat	extracellular	24.38	34.69
TraesCS6A01G172800.1	Wheat	extracellular, vacuole	22.48	34.6
TraesCS5A01G164000.1	Wheat	extracellular, vacuole	23.24	34.46
TraesCS6A01G172900.1	Wheat	extracellular, golgi	23.24	34.08
TraesCS2A01G477400.1	Wheat	golgi, vacuole	23.24	33.61
TraesCS7A01G388700.1	Wheat	extracellular	23.24	33.42
TraesCS4A01G316500.1	Wheat	golgi	23.62	33.24
TraesCS6A01G104300.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	23.05	32.35
TraesCS1A01G295000.1	Wheat	plastid	22.67	32.34
TraesCS1A01G322600.1	Wheat	mitochondrion	24.0	31.98
TraesCS4A01G303600.1	Wheat	cytosol	12.76	31.75
TraesCS1A01G135900.1	Wheat	plastid	22.29	31.45
TraesCS7A01G339400.1	Wheat	extracellular	20.76	31.14
TraesCS3A01G348300.1	Wheat	mitochondrion	24.76	31.1
TraesCS4A01G316400.1	Wheat	mitochondrion	21.9	29.72
TraesCS6A01G111000.1	Wheat	extracellular, golgi	19.43	29.06
TraesCS5A01G327300.1	Wheat	cytosol	11.43	27.03
TraesCS7A01G339300.1	Wheat	cytosol	13.9	26.74
TraesCS6A01G002700.1	Wheat	mitochondrion	23.43	26.23

Protein Annotations

EnsemblPlants:TraesCS6A01G027000.1	EnsemblPlantsGene:TraesCS6A01G027000	Gene3D:3.40.50.1110	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787
GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	PANTHER:PTHR22835
PANTHER:PTHR22835:SF277	PFAM:PF00657	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52266	TIGR:cd01837
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr6A:-:13665410..13667592

Molecular Weight (calculated)

57939.1 Da

IEP (calculated)

8.758

GRAVY (calculated)

-0.583

Length

525 amino acids

Sequence
(BLAST)

001: MRRPAVVAVA LLLLIAWQPA PGRTAAAMDE QDEDPPARSL PPPDEQDDDP PTRSMPPPSD EQDDNPPLRS MPPPPSDEQE DNPPVRSMPP PPPSDKQEDN
101: PSWPGLPLLP PPPPPGSMPL PPPPPAAEPA APPTRPRRAR LPPRQDDPPE PEPPELPRHR RTPKDPTPPR TVVPPQEPGW AAVPLPMAPM PAPGRPINYS
201: TTGWTTMLVF GDSTVDPGNN NRLQTVMRAN FLPYGAGFLG GRPTGRFSNG RLITDILAER LGVARSLPGF REPRLRPRQL RRGVSFASAG SGYDDATARV
301: SNTLSFSNQV EDLWRYRRNL QRLVGPRRAG QLLRRATFVI SAGTTDLFNH YLATNRSGTE SWPPYENLLI TRVANYTQAM RALGGRRFVF VGVPPVGCLP
401: LVRTLLGTGA ETCHENMNSM ATSFNRRLGE VVRFLRNQRD IRATFVDVYP IISMATIDPK NFGLTETSRG CCGTGVIEVG QTCRGRLTCT DPSKYMYWDA
501: VHQTERMNQI ITDYVIMNSI GEIYA

Best Arabidopsis Sequence Match ( AT5G45950.1 )
(BLAST)

001: MLLVAFVTLL VAVALQPLPS VLSLDVHLLR QLAAKHNVTS ILVFGDSSVD PGNNNFIKTE MKGNFPPYGE NFINHKPTGR LCDGLLAPDY IAEAMGYPPI
101: PAFLDPSLTQ ADLTRGASFA SAGSGYDDLT ANISNVWSFT TQANYFLHYK IHLTKLVGPL ESAKMINNAI FLMSMGSNDF LQNYLVDFTR QKQFTVEQYI
201: EFLSHRMLYD AKMLHRLGAK RLVVVGVPPM GCMPLIKYLR GQKTCVDQLN QIAFSFNAKI IKNLELLQSK IGLKTIYVDA YSTIQEAIKN PRKFGFVEAS
301: LGCCGTGTYE YGETCKDMQV CKDPTKYVFW DAVHPTQRMY QIIVKKAIAS ISEEFLV

Arabidopsis Description

GDSL esterase/lipase At5g45950 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ41]
SUBAcon: [extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.