Factsheet for TraesCS1A01G295000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G297500.1	Wheat	endoplasmic reticulum, vacuole	97.55	97.55
TraesCS1B01G304400.1	Wheat	endoplasmic reticulum, extracellular	94.57	94.57
HORVU1Hr1G070790.1	Barley	extracellular, plastid	90.49	87.17
Zm00001d010584_P001	Maize	endoplasmic reticulum, extracellular, vacuole	62.77	64.89
Zm00001d038411_P001	Maize	extracellular	61.41	64.57
Os05t0468500-01	Rice	extracellular	63.04	64.44
OQU78161	Sorghum	extracellular	62.23	59.02
TraesCS3A01G351000.1	Wheat	extracellular	54.62	54.47
KRH73274	Soybean	extracellular	44.29	45.4
GSMUA_Achr6P23650_001	Banana	extracellular	41.03	42.54
Bra017022.1-P	Field mustard	plasma membrane	41.03	42.06
CDY07069	Canola	plasma membrane	41.03	42.06
Bra004974.1-P	Field mustard	endoplasmic reticulum, vacuole	38.86	39.83
CDY70930	Canola	endoplasmic reticulum, vacuole	38.86	39.83
AT2G40250.1	Thale cress	vacuole	38.59	39.34
TraesCS5A01G164000.1	Wheat	extracellular, vacuole	36.41	37.85
TraesCS6A01G172900.1	Wheat	extracellular, golgi	34.51	35.47
TraesCS5A01G167400.1	Wheat	endoplasmic reticulum, extracellular, vacuole	35.05	35.44
TraesCS5A01G164200.1	Wheat	extracellular	34.24	35.29
TraesCS1A01G135900.1	Wheat	plastid	35.6	35.22
TraesCS2A01G477400.1	Wheat	golgi, vacuole	34.51	34.99
TraesCS3A01G007800.1	Wheat	endoplasmic reticulum, extracellular	33.15	34.66
TraesCS6A01G172800.1	Wheat	extracellular, vacuole	32.07	34.6
TraesCS3A01G348300.1	Wheat	mitochondrion	39.13	34.45
TraesCS7A01G388700.1	Wheat	extracellular	32.88	33.15
TraesCS7A01G339400.1	Wheat	extracellular	30.71	32.29
TraesCS5A01G327300.1	Wheat	cytosol	19.29	31.98
TraesCS4A01G316500.1	Wheat	golgi	32.07	31.64
TraesCS6A01G111000.1	Wheat	extracellular, golgi	29.62	31.05
TraesCS1A01G322600.1	Wheat	mitochondrion	33.15	30.96
TraesCS4A01G303600.1	Wheat	cytosol	17.39	30.33
TraesCS4A01G316400.1	Wheat	mitochondrion	31.52	29.97
TraesCS6A01G104300.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	30.43	29.95
TraesCS7A01G003700.1	Wheat	extracellular, plasma membrane	31.79	26.53
TraesCS4A01G494900.1	Wheat	extracellular, plasma membrane, vacuole	31.79	25.89
TraesCS7A01G339300.1	Wheat	cytosol	18.75	25.27
TraesCS6A01G002700.1	Wheat	mitochondrion	31.25	24.52
TraesCS6A01G027000.1	Wheat	extracellular, plasma membrane, vacuole	32.34	22.67

Protein Annotations

EnsemblPlants:TraesCS1A01G295000.1	EnsemblPlantsGene:TraesCS1A01G295000	Gene3D:3.40.50.1110	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787
GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	ncoils:Coil
PANTHER:PTHR22835	PANTHER:PTHR22835:SF305	PFAM:PF00657	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52266
TIGR:cd01837	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr1A:-:490022359..490023557

Molecular Weight (calculated)

38865.4 Da

IEP (calculated)

6.984

GRAVY (calculated)

0.067

Length

368 amino acids

Sequence
(BLAST)

001: MAPPSPAPAA ALFLAALLVL SASPASAARP RSSSKVAAGP HDIPAVFAFG DSTLDPGNNN RLFTVVRADH APYGRAFPAG VPPSGRFSDG KLITDYIVAA
101: LGIKDLLPAY HASGVTHADA TTGASFASGG SGLDDITAHA VMVSTFSSQI ADFQQLLSRI GEPQAADIAA KSLFILSAGT NDVTMNYYDL PFRALQYPTI
201: DAYHDYLISC YQSYIQSLYK LGARRFIVAG MPPVGCLPMQ KSLRGQQPPL GHGCVDLQNE EVQRYNAKLQ QALAALEAAS AGASISYVDT YAPLMDMVAQ
301: PNKYGFTQTG QGCCGTGLLE MGAMCTGLLP QCKSPAQYMF FDAVHPTQAA YKAVADQIIK THIAQFKN

Best Arabidopsis Sequence Match ( AT1G06990.1 )
(BLAST)

001: MLIHVIIFMI ITTMQFSTTC HAYVINVTNV NVSMFPAILV FGDSTIDTGN NNYIKTYIRA NFPPYGCNFP GHNATGRFSN GKLIPDFIAS LMGIKDTVPP
101: FLDPHLSDSD IITGVCFASA GSGYDNLTDR ATSTLSVDKQ ADMLRSYVER LSQIVGDEKA ASIVSEALVI VSSGTNDFNL NLYDTPSRRQ KLGVDGYQSF
201: ILSNVHNFVQ ELYDIGCRKI MVLGLPPVGC LPIQMTMAMQ KQNERRCIDK QNSDSQEFNQ KLKNSLTEMQ SNLTGSVIFY GDIYGALFDM ATNPQRYGLK
301: ETTRGCCGTG EIELAYLCNA LTRICPNPNQ YLFWDDIHPS QIAYIVISLS LVEQIFHVLS

Arabidopsis Description

GDSL esterase/lipase At1g06990 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMJ3]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.