Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G297500.1 | Wheat | endoplasmic reticulum, vacuole | 95.11 | 95.11 |
| TraesCS1A01G295000.1 | Wheat | plastid | 94.57 | 94.57 |
| HORVU1Hr1G070790.1 | Barley | extracellular, plastid | 90.22 | 86.91 |
| Zm00001d010584_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 63.59 | 65.73 |
| Zm00001d038411_P001 | Maize | extracellular | 62.23 | 65.43 |
| Os05t0468500-01 | Rice | extracellular | 63.32 | 64.72 |
| OQU78161 | Sorghum | extracellular | 63.32 | 60.05 |
| TraesCS3B01G383600.1 | Wheat | extracellular | 54.35 | 55.1 |
| KRH73274 | Soybean | extracellular | 43.48 | 44.57 |
| GSMUA_Achr6P23650_001 | Banana | extracellular | 42.12 | 43.66 |
| Bra017022.1-P | Field mustard | plasma membrane | 41.03 | 42.06 |
| CDY07069 | Canola | plasma membrane | 41.03 | 42.06 |
| TraesCS3B01G380200.1 | Wheat | plasma membrane | 38.59 | 40.46 |
| Bra004974.1-P | Field mustard | endoplasmic reticulum, vacuole | 38.59 | 39.55 |
| CDY70930 | Canola | endoplasmic reticulum, vacuole | 38.59 | 39.55 |
| AT2G40250.1 | Thale cress | vacuole | 38.59 | 39.34 |
| TraesCS5B01G161500.1 | Wheat | extracellular | 36.14 | 37.57 |
| TraesCS5B01G164400.1 | Wheat | endoplasmic reticulum, vacuole | 36.41 | 36.81 |
| TraesCS5B01G161700.1 | Wheat | golgi | 35.6 | 36.49 |
| TraesCS6B01G200500.1 | Wheat | extracellular, golgi | 35.05 | 36.24 |
| TraesCS6B01G200400.1 | Wheat | extracellular, plastid | 32.88 | 35.17 |
| TraesCS1B01G156300.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 34.78 | 34.41 |
| TraesCS2B01G500500.1 | Wheat | mitochondrion | 34.78 | 34.22 |
| TraesCS6B01G133500.1 | Wheat | extracellular | 33.7 | 34.16 |
| TraesCS2B01G297300.1 | Wheat | plasma membrane | 32.34 | 33.9 |
| TraesCS7B01G250800.1 | Wheat | extracellular | 31.52 | 33.14 |
| TraesCS6B01G139100.1 | Wheat | extracellular, golgi | 31.52 | 33.05 |
| TraesCS7B01G250700.1 | Wheat | extracellular, vacuole | 30.98 | 32.29 |
| TraesCS7B01G290600.1 | Wheat | golgi | 32.07 | 32.24 |
| TraesCS5B01G562600.1 | Wheat | golgi, mitochondrion | 32.07 | 31.81 |
| TraesCS4B01G010200.1 | Wheat | endoplasmic reticulum | 30.98 | 30.81 |
| TraesCS5B01G562700.1 | Wheat | golgi | 31.25 | 30.03 |
| TraesCS1B01G334900.1 | Wheat | plastid | 33.97 | 29.41 |
| TraesCS6B01G007700.1 | Wheat | plastid | 32.34 | 28.47 |
| TraesCS6B01G038200.1 | Wheat | endoplasmic reticulum, extracellular | 32.34 | 22.93 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G304400.1 | EnsemblPlantsGene:TraesCS1B01G304400 | Gene3D:3.40.50.1110 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016787 |
| GO:GO:0016788 | InterPro:GDSL | InterPro:IPR036514 | InterPro:SGNH_hydro_sf | InterPro:SGNH_plant_lipase_like | ncoils:Coil |
| PANTHER:PTHR22835 | PANTHER:PTHR22835:SF305 | PFAM:PF00657 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF52266 |
| TIGR:cd01837 | TMHMM:TMhelix | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr1B:-:526431567..526432789
Molecular Weight (calculated)
38917.5 Da
IEP (calculated)
6.992
GRAVY (calculated)
0.051
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPRSPAPAA ALFLAALLVL AASTASAARP RSSSKAAAGP HDIPAVFAFG DSTLDPGNNN RLPTLVRADH APYGRAFPAG VPPSGRFSDG KLITDYIVAA
101: LGIKDLLPAY HASGVTHANA TTGVSFASGG SGLDDITAHT VVVSTFSSQI ADFQQLLSRI GEPQAADIAA KSLFILSAGT NDVTMNYYDL PFRALEYPTI
201: DAYHDYLISL YQSYIQSLYK LGAWRFIVAG MPPVGCLPMQ KSLRGQQPPL GHGCVDLQNE EAQRYNAKLQ QALAALEAAT AGASLSYVDT YAPLMDMVAQ
301: PKKYGFTQTG QGCCGTGLLE MGAMCTGLLP QCKSPAEYMF FDAVHPTQAA YKAVADQIVK THISQFKN
101: LGIKDLLPAY HASGVTHANA TTGVSFASGG SGLDDITAHT VVVSTFSSQI ADFQQLLSRI GEPQAADIAA KSLFILSAGT NDVTMNYYDL PFRALEYPTI
201: DAYHDYLISL YQSYIQSLYK LGAWRFIVAG MPPVGCLPMQ KSLRGQQPPL GHGCVDLQNE EAQRYNAKLQ QALAALEAAT AGASLSYVDT YAPLMDMVAQ
301: PKKYGFTQTG QGCCGTGLLE MGAMCTGLLP QCKSPAEYMF FDAVHPTQAA YKAVADQIVK THISQFKN
001: MSTSKTITFT LFIAALLSSC DAATNATSQP LFPAILIFGD STVDTGNNNY HSQTIFKAKH LPYGIDLPNH KASGRFTNGK IFSDIIATKL NIKQFVPPFL
101: QPNLSDQEIV TGVCFASAGA GYDDHTSLST QAIRVLDQQK MFKNYIARLK SIVGDKKAME IIKNALVVIS AGPNDFILNY YDIPSRRLEF PHISGYQDFV
201: LQRLDNFVRE LYSLGCRKIM VGGLPPMGCL PIQMTAKFRN ALRFCLEQEN RDSVLYNQKL QNLLPQIEAS LTGSKILYSN VYDPMMDMMQ NPSKYGFKET
301: KRGCCGTGHL ETSFMCNAFS PTCRNHSEFL FFDSIHPSEA TYNYMGNFLD TQIRVWLSLR LKS
101: QPNLSDQEIV TGVCFASAGA GYDDHTSLST QAIRVLDQQK MFKNYIARLK SIVGDKKAME IIKNALVVIS AGPNDFILNY YDIPSRRLEF PHISGYQDFV
201: LQRLDNFVRE LYSLGCRKIM VGGLPPMGCL PIQMTAKFRN ALRFCLEQEN RDSVLYNQKL QNLLPQIEAS LTGSKILYSN VYDPMMDMMQ NPSKYGFKET
301: KRGCCGTGHL ETSFMCNAFS PTCRNHSEFL FFDSIHPSEA TYNYMGNFLD TQIRVWLSLR LKS
Arabidopsis Description
GDSL esterase/lipase At2g24560 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJA9]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.