Factsheet for TraesCS6B01G200400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular

Predictor Summary:

plastid 2
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G172800.1	Wheat	extracellular, vacuole	97.67	98.53
TraesCS6D01G161900.1	Wheat	endoplasmic reticulum	98.26	93.63
HORVU6Hr1G035210.2	Barley	cytosol, peroxisome	95.64	81.44
Os02t0189300-01	Rice	endoplasmic reticulum, extracellular	79.36	75.0
Zm00001d015637_P001	Maize	extracellular	76.45	73.26
OQU84537	Sorghum	endoplasmic reticulum, extracellular	75.58	73.03
TraesCS7B01G290600.1	Wheat	golgi	68.02	63.93
GSMUA_Achr7P05490_001	Banana	endoplasmic reticulum, extracellular	62.21	60.8
GSMUA_Achr3P13030_001	Banana	endoplasmic reticulum, golgi	59.88	58.36
VIT_19s0090g01160.t01	Wine grape	extracellular, golgi	52.62	52.62
KRH14826	Soybean	endoplasmic reticulum, extracellular	52.62	52.31
KRH46013	Soybean	extracellular	53.2	52.29
Bra004735.1-P	Field mustard	extracellular	51.16	52.23
AT4G26790.1	Thale cress	extracellular, golgi	52.91	51.85
AT2G42990.1	Thale cress	extracellular	52.62	51.71
KRH73314	Soybean	endoplasmic reticulum, extracellular	52.62	51.71
KRG98969	Soybean	extracellular	52.91	51.41
Bra026402.1-P	Field mustard	extracellular	52.33	51.28
CDX89302	Canola	extracellular	52.33	51.28
CDY29250	Canola	extracellular	52.03	51.0
PGSC0003DMT400001828	Potato	extracellular	52.33	50.99
Solyc07g049430.2.1	Tomato	extracellular	52.03	50.71
CDY55498	Canola	extracellular, plasma membrane	51.16	50.29
PGSC0003DMT400038810	Potato	extracellular	51.74	50.28
CDY53653	Canola	extracellular, plasma membrane	50.87	50.0
Solyc07g049440.2.1	Tomato	extracellular	51.16	49.72
PGSC0003DMT400038808	Potato	golgi, plasma membrane	50.87	49.16
Solyc05g043330.2.1	Tomato	plasma membrane	50.87	49.02
AT2G04570.1	Thale cress	extracellular	49.71	48.86
PGSC0003DMT400001826	Potato	endoplasmic reticulum, extracellular, vacuole	50.29	48.6
TraesCS6B01G200500.1	Wheat	extracellular, golgi	50.0	48.31
Bra013200.1-P	Field mustard	extracellular	49.13	48.01
CDX93056	Canola	extracellular	49.13	48.01
KRH14825	Soybean	nucleus	49.71	47.77
CDY15057	Canola	extracellular	48.84	47.73
KRH73315	Soybean	nucleus	48.84	46.93
KRH17906	Soybean	endoplasmic reticulum, extracellular	47.09	46.42
TraesCS5B01G161700.1	Wheat	golgi	47.67	45.68
Solyc05g043320.1.1	Tomato	cytosol	29.07	43.86
TraesCS5B01G161500.1	Wheat	extracellular	45.06	43.79
TraesCS5B01G164400.1	Wheat	endoplasmic reticulum, vacuole	45.93	43.41
TraesCS3B01G383600.1	Wheat	extracellular	39.53	37.47
TraesCS3B01G380200.1	Wheat	plasma membrane	34.88	34.19
TraesCS1B01G156300.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	36.63	33.87
TraesCS2B01G500500.1	Wheat	mitochondrion	35.76	32.89
TraesCS1B01G304400.1	Wheat	endoplasmic reticulum, extracellular	35.17	32.88
TraesCS5B01G562600.1	Wheat	golgi, mitochondrion	35.17	32.61
TraesCS6B01G139100.1	Wheat	extracellular, golgi	31.98	31.34
TraesCS4B01G010200.1	Wheat	endoplasmic reticulum	33.43	31.08
TraesCS7B01G250700.1	Wheat	extracellular, vacuole	31.1	30.31
TraesCS5B01G562700.1	Wheat	golgi	33.43	30.03
TraesCS2B01G297300.1	Wheat	plasma membrane	30.52	29.91
TraesCS7B01G250800.1	Wheat	extracellular	30.23	29.71
TraesCS6B01G133500.1	Wheat	extracellular	31.1	29.48
TraesCS1B01G334900.1	Wheat	plastid	36.05	29.18
TraesCS6B01G007700.1	Wheat	plastid	34.59	28.47
VIT_12s0059g01590.t01	Wine grape	extracellular	53.78	28.12
TraesCS6B01G038200.1	Wheat	endoplasmic reticulum, extracellular	33.72	22.35

Protein Annotations

EnsemblPlants:TraesCS6B01G200400.1	EnsemblPlantsGene:TraesCS6B01G200400	Gene3D:3.40.50.1110	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787
GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	PANTHER:PTHR22835
PANTHER:PTHR22835:SF336	PFAM:PF00657	SEG:seg	SUPFAM:SSF52266	TIGR:cd01837	MapMan:35.1

Description

No Description!

Coordinates

chr6B:-:240244545..240250407

Molecular Weight (calculated)

37239.6 Da

IEP (calculated)

4.942

GRAVY (calculated)

0.035

Length

344 amino acids

Sequence
(BLAST)

001: MLVLNSGGSG SAAGAVVPAV IVFGDSTVDT GNNNQIGTTL RSDFPPYGRD MPGGARATGR FGNGRLPPDF ISEALGLPPL VPAYLDPAYG IGDFARGVCF
101: ASAGTGVDNA TAGVLAVIPL WKEVEYYKDY QLRLRAYAGA ERARAIVRGA LHVVSIGTND FLENYYMLGT GRFAEYTVAE FSDFLVAGAR RFLSEIHRLG
201: ARRVTFAGLA PIGCLPLERA ENMIHGGGCI EEYNRVAREY NAKVEAMLGA LRAELPDLRL AYVPVYDTML DLVTNPAKFG LENVEEGCCA TGRFEMGFMC
301: NDEAPMTCAD ADKFLFWDAF HPTQKVNRIM ANHTIDICYQ QGLL

Best Arabidopsis Sequence Match ( AT4G26790.2 )
(BLAST)

001: MQRNRVLAFL LLAAQLLVKI PETCAKFPAL IVFGDSTVDS GNNNQISTVL KSNFQPYGRD YFDGKATGRF SNGRIAPDFI SEGLGLKNAV PAYLDPAYNI
101: ADFATGVCFA SAGTGLDNAT SAVLSVMPLW KEVEYYKEYQ TRLRSYLGEE KANEIISESL YLISIGTNDF LENYYLLPRK LRKYSVNEYQ YFLIGIAADF
201: VTDIYRLGAR KMSLSGLSPF GCLPLERTTQ LFYGSKCIEE YNIVARDFNI KMEEKVFQLN RDLNGIQLVF SNPYDLVSEI IYHPEAFGFE NVRSACCGTG
301: YYEMSYLCDK MNPFTCSDAS KYVFWDSFHP TEKTNAIVAN HVLKYDLSRF Q

Arabidopsis Description

GDSL esterase/lipase At4g26790 [Source:UniProtKB/Swiss-Prot;Acc:Q8VY93]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.