Factsheet for PGSC0003DMT400001826

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

plastid 1
extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g049440.2.1	Tomato	extracellular	95.79	96.33
VIT_19s0090g01160.t01	Wine grape	extracellular, golgi	62.36	64.53
PGSC0003DMT400001828	Potato	extracellular	62.36	62.89
PGSC0003DMT400038808	Potato	golgi, plasma membrane	60.39	60.39
AT4G26790.1	Thale cress	extracellular, golgi	57.87	58.69
Bra026402.1-P	Field mustard	extracellular	56.46	57.27
CDX89302	Canola	extracellular	56.46	57.27
PGSC0003DMT400038810	Potato	extracellular	56.74	57.06
CDY29250	Canola	extracellular	56.18	56.98
GSMUA_Achr4P09470_001	Banana	extracellular	55.62	56.9
GSMUA_Achr7P05490_001	Banana	endoplasmic reticulum, extracellular	55.62	56.25
GSMUA_Achr2P05280_001	Banana	extracellular	49.16	55.2
GSMUA_Achr4P09480_001	Banana	endoplasmic reticulum, golgi	53.93	54.86
GSMUA_Achr3P13030_001	Banana	endoplasmic reticulum, golgi	52.81	53.26
Os09t0132900-02	Rice	extracellular	52.25	52.84
HORVU0Hr1G012390.2	Barley	extracellular, vacuole	51.97	51.39
HORVU5Hr1G049650.2	Barley	extracellular, vacuole	51.97	51.39
TraesCSU01G210200.1	Wheat	extracellular	50.56	51.14
TraesCS3A01G007800.1	Wheat	endoplasmic reticulum, extracellular	50.56	51.14
TraesCSU01G186900.1	Wheat	extracellular	50.56	51.14
TraesCS6A01G172800.1	Wheat	extracellular, vacuole	48.88	51.03
Zm00001d015636_P001	Maize	extracellular	51.69	50.97
TraesCSU01G187000.1	Wheat	extracellular	49.16	50.72
TraesCS5A01G164200.1	Wheat	extracellular	50.84	50.7
TraesCS6B01G200400.1	Wheat	extracellular, plastid	48.6	50.29
TraesCS5D01G169100.1	Wheat	extracellular, golgi	50.56	50.28
TraesCS3D01G002900.1	Wheat	plastid	50.56	50.28
TraesCS5B01G161700.1	Wheat	golgi	50.28	49.86
Os02t0189300-01	Rice	endoplasmic reticulum, extracellular	50.84	49.73
TraesCS6D01G162000.3	Wheat	extracellular, vacuole	49.72	49.72
TraesCS6B01G200500.1	Wheat	extracellular, golgi	49.44	49.44
EES16382	Sorghum	extracellular, golgi	50.56	49.32
TraesCS6D01G161900.1	Wheat	endoplasmic reticulum	50.0	49.31
TraesCS6A01G172900.1	Wheat	extracellular, golgi	49.44	49.16
Zm00001d019855_P001	Maize	extracellular, golgi	48.6	49.15
Os09t0132200-01	Rice	extracellular	48.31	49.0
HORVU6Hr1G035230.1	Barley	extracellular, golgi, mitochondrion	50.28	48.91
TraesCS5A01G164000.1	Wheat	extracellular, vacuole	48.6	48.87
Zm00001d015637_P001	Maize	extracellular	49.16	48.75
Os02t0189200-01	Rice	extracellular	51.12	48.28
TraesCS5B01G161500.1	Wheat	extracellular	47.75	48.02
HORVU0Hr1G012230.2	Barley	extracellular, vacuole	47.47	47.88
OQU84537	Sorghum	endoplasmic reticulum, extracellular	47.75	47.75
TraesCS5D01G169000.1	Wheat	extracellular	47.47	47.74
OQU76903	Sorghum	plastid	48.6	47.66
EES04670	Sorghum	extracellular	50.28	47.48
Zm00001d014487_P001	Maize	plastid	48.31	47.25
TraesCS7D01G384600.1	Wheat	endoplasmic reticulum, extracellular, golgi	48.31	47.25
TraesCS7A01G388700.1	Wheat	extracellular	48.03	46.85
TraesCS7B01G290600.1	Wheat	golgi	48.03	46.72
Zm00001d053252_P001	Maize	extracellular, golgi, mitochondrion	45.22	46.53
EER90082	Sorghum	golgi	48.03	46.47
HORVU7Hr1G092040.2	Barley	golgi	48.03	46.34
Os06t0636700-01	Rice	extracellular	49.72	46.34
Zm00001d036770_P001	Maize	mitochondrion	48.03	45.97
EER94394	Sorghum	extracellular	45.22	45.1
Zm00001d000061_P001	Maize	extracellular, golgi	44.38	45.01
EER96404	Sorghum	extracellular, vacuole	45.79	44.9
Zm00001d046642_P001	Maize	extracellular, golgi	48.6	44.47
Os09t0247600-01	Rice	extracellular, golgi	44.38	44.38
HORVU6Hr1G035210.2	Barley	cytosol, peroxisome	50.0	44.06
TraesCS5D01G171800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	42.7	41.87
HORVU3Hr1G001200.2	Barley	mitochondrion	48.31	41.75
TraesCS5A01G167400.1	Wheat	endoplasmic reticulum, extracellular, vacuole	42.13	41.21
TraesCS5B01G164400.1	Wheat	endoplasmic reticulum, vacuole	41.85	40.93
PGSC0003DMT400075642	Potato	extracellular	41.01	40.56
PGSC0003DMT400025569	Potato	extracellular	39.04	39.38
PGSC0003DMT400068453	Potato	cytosol	37.64	38.84
KXG26546	Sorghum	mitochondrion, plastid	48.88	38.75
PGSC0003DMT400025568	Potato	extracellular	37.64	38.29
PGSC0003DMT400027838	Potato	extracellular	37.64	37.43
PGSC0003DMT400070969	Potato	extracellular	22.47	37.38
PGSC0003DMT400086168	Potato	extracellular	32.87	36.91
VIT_12s0059g01590.t01	Wine grape	extracellular	67.7	36.63
PGSC0003DMT400058744	Potato	plasma membrane	37.08	36.26
PGSC0003DMT400025571	Potato	cytosol, plasma membrane, plastid	33.15	16.76
PGSC0003DMT400091356	Potato	cytosol, nucleus, plasma membrane	31.18	14.09

Protein Annotations

EnsemblPlants:PGSC0003DMT400001826	EnsemblPlantsGene:PGSC0003DMG400000685	EntrezGene:102581337	Gene3D:3.40.50.1110	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like
PANTHER:PTHR22835	PANTHER:PTHR22835:SF229	PFAM:PF00657	PGSC:PGSC0003DMG400000685	RefSeq:XP_006357973.2	SEG:seg
SignalP:SignalP-noTM	SUPFAM:SSF52266	UniParc:UPI0002949094	UniProt:M0ZJ57	MapMan:35.1	:

Description

Zinc finger protein [Source:PGSC_GENE;Acc:PGSC0003DMG400000685]

Coordinates

chr7:+:45228370..45231519

Molecular Weight (calculated)

39655.6 Da

IEP (calculated)

6.507

GRAVY (calculated)

-0.088

Length

356 amino acids

Sequence
(BLAST)

001: MAHTSNTTIS SCLLIIVQLF FMLPAKTNAK IPAIIVFGDS SVDSGNNNHI ETVARSNFMP YGRDFAGGRP TGRFSNGRIT TDFISEAAGL KQIVPAYLDP
101: AYNMSDFAVG VCFASAGTGY DNATADVLGV IPLWKQVEYY KEYQKKLRAY LGDTKANEVI SEALYATSLG TNDFLENYYT MPQRRSQYTI DQFQIYLVGI
201: AKNFITNLYN LGARKISLGG LPPMGCMPLE RTRNMGNGNE CMESYNLVAV NFNEKLNGLV MELNKELPEI QVVLSNPYEP MLQMIKKPSS YGFEVASIAC
301: CATGLFEMGY ACDRYNLFTC KDANKYIFWD AFHPTERTDR IIADHVVKTA LSKFLA

Best Arabidopsis Sequence Match ( AT2G04570.1 )
(BLAST)

001: MGHLKSLFTI LFLIAMSSTV TFAGKIPAII VFGDSSVDAG NNNYIPTVAR SNFEPYGRDF VGGKPTGRFC NGKIATDFMS EALGLKPIIP AYLDPSYNIS
101: DFATGVTFAS AATGYDNATS DVLSVLPLWK QLEYYKEYQT KLKAYQGKDR GTETIESSLY LISIGTNDFL ENYFAFPGRS SQYSVSLYQD FLAGIAKEFV
201: KKLHGLGARK ISLGGLPPMG CMPLERATNI GTGGECVGRY NDIAVQFNSK LDKMVEKLSK ELPGSNLVFS NPYEPFMRII KNPSSFGFEV VGAACCATGM
301: FEMGYGCQRN NPFTCTNADK YVFWDSFHPT QKTNHIMANA LMNSTFPHFL

Arabidopsis Description

GDSL esterase/lipase At2g04570 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJB4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.