Factsheet for PGSC0003DMT400025569

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
golgi 5
plasma membrane 5
endoplasmic reticulum 5
vacuole 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400001535
PGSC0003DMT400006495
PGSC0003DMT400071510
PGSC0003DMT400071835
PGSC0003DMT400073246

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G75880.1	PGSC0003DMT400006495	AT3G16310.1	21798944
AT1G75880.1	PGSC0003DMT400071510	AT4G19030.1	21798944
AT1G75880.1	PGSC0003DMT400073246	AT4G19030.1	21798944
AT1G75880.1	PGSC0003DMT400001535	AT5G24290.1	21798944
AT1G75880.1	PGSC0003DMT400071835	AT5G24290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g081770.2.1	Tomato	cytosol	92.63	95.89
PGSC0003DMT400025568	Potato	extracellular	82.72	83.43
PGSC0003DMT400075642	Potato	extracellular	70.82	69.44
KRH51682	Soybean	extracellular, golgi	59.77	57.97
VIT_18s0001g14760.t01	Wine grape	extracellular	45.61	57.71
VIT_18s0001g14790.t01	Wine grape	endoplasmic reticulum, golgi	58.64	57.66
KRH05980	Soybean	endoplasmic reticulum, golgi	59.21	57.58
VIT_18s0001g14810.t01	Wine grape	cytosol	56.09	57.23
KRH61020	Soybean	endoplasmic reticulum, golgi, plastid	58.92	57.14
KRH17463	Soybean	endoplasmic reticulum, golgi	58.64	57.02
PGSC0003DMT400070969	Potato	extracellular	33.99	56.07
VIT_18s0001g14780.t01	Wine grape	plasma membrane	52.12	54.76
KRH17461	Soybean	nucleus	56.37	54.08
CDX87653	Canola	cytosol	46.74	53.92
Bra003736.1-P	Field mustard	extracellular, plasma membrane	55.24	53.87
CDX68113	Canola	endoplasmic reticulum, plasma membrane	55.24	53.87
CDX85929	Canola	endoplasmic reticulum, plasma membrane	55.24	53.87
Bra015804.1-P	Field mustard	cytosol	46.46	53.59
KRH17460	Soybean	nucleus	54.96	53.59
KRH05977	Soybean	nucleus	56.37	53.49
CDX73211	Canola	extracellular	54.67	53.31
VIT_18s0001g14800.t01	Wine grape	extracellular, golgi	54.96	53.3
Bra015802.1-P	Field mustard	extracellular	54.39	53.04
CDX87651	Canola	extracellular	54.39	53.04
KRH61019	Soybean	extracellular, plasma membrane	53.54	52.94
AT1G75900.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	54.39	52.75
Bra015803.1-P	Field mustard	cytosol	51.56	52.6
KRH05976	Soybean	nucleus	54.96	52.15
KRH51683	Soybean	plasma membrane	42.21	52.1
KRH51681	Soybean	extracellular, plasma membrane	52.41	51.82
KRH17462	Soybean	extracellular, plasma membrane, plastid	53.82	51.77
GSMUA_Achr11P...	Banana	endoplasmic reticulum, vacuole	47.59	50.76
GSMUA_Achr5P11240_001	Banana	extracellular, golgi	51.56	50.42
KRH05978	Soybean	plastid	53.82	50.4
CDX87652	Canola	golgi, plasma membrane	51.56	50.14
CDX73210	Canola	golgi, mitochondrion, plasma membrane	51.56	49.32
Bra003737.1-P	Field mustard	cytosol, plastid	44.76	49.07
CDY42062	Canola	cytosol	39.66	48.61
GSMUA_Achr4P25550_001	Banana	extracellular, golgi, vacuole	49.86	48.48
CDY70534	Canola	plasma membrane	51.27	48.4
CDY53562	Canola	extracellular	33.99	48.39
AT3G14820.1	Thale cress	extracellular, plasma membrane	47.88	48.15
CDY20086	Canola	extracellular, plasma membrane	47.59	48.14
CDX85928	Canola	plasma membrane	50.99	48.13
CDY69331	Canola	cytosol	35.13	48.06
AT1G75880.1	Thale cress	golgi, plasma membrane	50.99	48.0
CDY32339	Canola	extracellular, plasma membrane	47.59	47.86
EER99270	Sorghum	extracellular, plasma membrane	48.44	47.5
Os09t0540400-02	Rice	extracellular, plasma membrane	47.88	46.17
AT5G42170.1	Thale cress	extracellular	47.88	45.8
CDY65553	Canola	extracellular	42.78	45.76
Bra027858.1-P	Field mustard	extracellular	45.04	45.56
Bra035295.1-P	Field mustard	mitochondrion	36.83	45.14
CDY48852	Canola	extracellular	41.64	45.09
Os10t0438600-01	Rice	plasma membrane	45.61	44.97
Zm00001d032888_P001	Maize	mitochondrion	46.46	44.93
AT3G43550.1	Thale cress	extracellular	36.54	44.79
Bra027859.1-P	Field mustard	extracellular	44.19	44.7
AT1G58525.1	Thale cress	extracellular	43.06	44.44
GSMUA_Achr4P25560_001	Banana	extracellular, golgi	46.18	44.41
AT3G43570.1	Thale cress	extracellular	40.23	44.38
AT1G58725.1	Thale cress	extracellular	43.63	44.13
AT1G59030.1	Thale cress	extracellular, plasma membrane	43.63	44.13
AT1G59406.1	Thale cress	extracellular	43.63	44.13
Bra016475.1-P	Field mustard	plastid	47.31	44.06
AT1G75890.3	Thale cress	plastid	49.29	44.05
CDY36116	Canola	extracellular, plasma membrane	39.66	43.89
AT1G20120.1	Thale cress	plasma membrane	49.86	43.78
Os02t0101400-01	Rice	cytosol	34.84	43.62
Os03t0859100-01	Rice	golgi	45.04	43.56
CDY53577	Canola	extracellular	40.23	43.56
CDY09420	Canola	extracellular	39.38	43.44
EER90469	Sorghum	extracellular, vacuole	46.46	43.39
HORVU6Hr1G001510.1	Barley	endoplasmic reticulum, vacuole	47.31	43.38
TraesCS5A01G327300.1	Wheat	cytosol	27.2	43.24
PGSC0003DMT400068453	Potato	cytosol	42.21	43.19
TraesCS7A01G339400.1	Wheat	extracellular	42.78	43.14
CDY64565	Canola	extracellular	39.09	43.12
Bra010987.1-P	Field mustard	plasma membrane	42.49	43.1
GSMUA_Achr4P25720_001	Banana	vacuole	44.19	43.09
TraesCS1A01G135900.1	Wheat	plastid	45.33	43.01
CDY51993	Canola	plasma membrane	38.81	42.95
CDY41727	Canola	extracellular	39.66	42.94
TraesCS7B01G250800.1	Wheat	extracellular	42.49	42.86
TraesCS1D01G138700.1	Wheat	endoplasmic reticulum, vacuole	45.04	42.63
AT1G20132.1	Thale cress	extracellular, vacuole	46.18	42.56
HORVU1Hr1G036440.1	Barley	endoplasmic reticulum, extracellular, plastid	44.76	42.47
TraesCS1B01G156300.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	44.76	42.47
TraesCS6B01G139100.1	Wheat	extracellular, golgi	42.21	42.45
Bra026636.1-P	Field mustard	extracellular	41.93	42.41
TraesCS1A01G322600.1	Wheat	mitochondrion	47.31	42.39
CDY41728	Canola	extracellular	39.09	42.33
TraesCS7D01G347000.1	Wheat	extracellular	41.93	42.29
TraesCS6A01G111000.1	Wheat	extracellular, golgi	41.93	42.17
Os06t0351500-01	Rice	endoplasmic reticulum, golgi, mitochondrion, plastid	45.04	42.06
Bra012211.1-P	Field mustard	endoplasmic reticulum, plasma membrane	49.86	42.0
CDY57591	Canola	endoplasmic reticulum, plasma membrane	49.86	42.0
CDY71031	Canola	cytosol	11.9	42.0
Zm00001d034917_P001	Maize	mitochondrion	44.48	41.76
TraesCS1D01G322600.1	Wheat	mitochondrion, plastid	46.46	41.62
CDY02386	Canola	golgi	46.18	41.58
Bra027951.1-P	Field mustard	extracellular	41.08	41.55
Os10t0140300-01	Rice	plasma membrane	41.08	41.55
CDY53576	Canola	extracellular	39.38	41.49
Zm00001d022615_P001	Maize	mitochondrion, plasma membrane	48.16	41.46
PGSC0003DMT400086168	Potato	extracellular	37.11	41.32
TraesCS4A01G316500.1	Wheat	golgi	43.63	41.29
TraesCS4B01G010200.1	Wheat	endoplasmic reticulum	43.06	41.08
TraesCS6D01G002800.1	Wheat	mitochondrion	47.59	41.08
TraesCS2A01G477400.1	Wheat	golgi, vacuole	42.21	41.05
TraesCS7B01G250700.1	Wheat	extracellular, vacuole	40.79	40.79
TraesCS4A01G303600.1	Wheat	cytosol	24.36	40.76
TraesCS5B01G562600.1	Wheat	golgi, mitochondrion	42.78	40.7
CDY44206	Canola	plasma membrane	43.91	40.58
TraesCS7D01G346700.1	Wheat	extracellular	40.79	40.56
TraesCS5D01G566800.1	Wheat	endoplasmic reticulum, golgi	42.49	40.43
Bra027950.1-P	Field mustard	extracellular	39.94	40.29
HORVU5Hr1G125000.1	Barley	vacuole	42.21	40.16
EER88779	Sorghum	extracellular, golgi, mitochondrion, plastid	43.34	40.16
HORVU7Hr1G083440.4	Barley	extracellular	40.23	40.0
HORVU7Hr1G083530.2	Barley	golgi	42.78	39.84
TraesCS2D01G476600.1	Wheat	mitochondrion	42.21	39.84
PGSC0003DMT400001828	Potato	extracellular	39.66	39.66
PGSC0003DMT400038808	Potato	golgi, plasma membrane	39.94	39.61
EER97970	Sorghum	plastid	43.06	39.58
TraesCS2B01G500500.1	Wheat	mitochondrion	41.93	39.57
CDY54336	Canola	extracellular, golgi, plasma membrane	34.28	39.54
TraesCS2B01G297300.1	Wheat	plasma membrane	39.09	39.32
TraesCS6B01G007700.1	Wheat	plastid	46.46	39.23
KXG38464	Sorghum	cytosol	47.31	39.2
TraesCS1B01G334900.1	Wheat	plastid	47.03	39.06
PGSC0003DMT400001826	Potato	endoplasmic reticulum, extracellular, vacuole	39.38	39.04
TraesCS2D01G278500.1	Wheat	plasma membrane, vacuole	38.81	39.03
PGSC0003DMT400058744	Potato	plasma membrane	40.23	39.01
TraesCS5B01G562700.1	Wheat	golgi	42.21	38.9
TraesCS6B01G133500.1	Wheat	extracellular	39.94	38.84
Zm00001d018791_P001	Maize	plastid	42.49	38.56
TraesCS6D01G093000.1	Wheat	extracellular, plasma membrane	39.66	38.25
TraesCS4A01G316400.1	Wheat	mitochondrion	41.64	37.98
TraesCS6A01G104300.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	40.23	37.97
PGSC0003DMT400038810	Potato	extracellular	37.68	37.57
KXG34395	Sorghum	plastid	41.36	37.24
HORVU6Hr1G018750.1	Barley	endoplasmic reticulum, plasma membrane	40.79	37.02
TraesCS5D01G566700.1	Wheat	mitochondrion	42.21	36.97
HORVU5Hr1G124980.2	Barley	plastid	42.21	36.43
HORVU2Hr1G107400.3	Barley	mitochondrion	22.95	36.32
HORVU2Hr1G068430.1	Barley	endoplasmic reticulum, mitochondrion, plasma membrane	38.81	36.24
TraesCS6A01G002700.1	Wheat	mitochondrion	47.59	35.82
TraesCS7D01G346900.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	24.08	35.42
PGSC0003DMT400027838	Potato	extracellular	35.13	34.64
Zm00001d014918_P001	Maize	mitochondrion	45.89	34.18
TraesCS7A01G339300.1	Wheat	cytosol	26.35	34.07
VIT_18s0001g14770.t01	Wine grape	plastid	58.64	32.96
CDY71376	Canola	plastid	43.06	31.02
OQU84135	Sorghum	plasma membrane	45.33	30.65
CDY12974	Canola	golgi, mitochondrion	46.18	30.13
AT1G20130.1	Thale cress	mitochondrion	41.93	27.72
CDY44205	Canola	plasma membrane	39.38	25.18
PGSC0003DMT400025571	Potato	cytosol, plasma membrane, plastid	47.31	23.72
Zm00001d014308_P001	Maize	endoplasmic reticulum	39.09	21.13
Bra012212.1-P	Field mustard	plastid	42.49	18.96
KXG38704	Sorghum	endoplasmic reticulum, plasma membrane	39.09	18.35
CDY67439	Canola	plasma membrane	43.06	16.95
CDY29371	Canola	plasma membrane	40.79	16.55
Bra025794.1-P	Field mustard	plasma membrane	40.51	16.07
PGSC0003DMT400091356	Potato	cytosol, nucleus, plasma membrane	33.71	15.1

Protein Annotations

Gene3D:3.40.50.1110	MapMan:35.1	InterPro:GDSL	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787
GO:GO:0016788	InterPro:IPR036514	UniProt:M1ALM3	PFAM:PF00657	EnsemblPlantsGene:PGSC0003DMG402009879	PGSC:PGSC0003DMG402009879
EnsemblPlants:PGSC0003DMT400025569	PANTHER:PTHR22835	PANTHER:PTHR22835:SF471	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	SUPFAM:SSF52266
SignalP:SignalP-noTM	UniParc:UPI0002968018	:	:	:	:

Description

Zinc finger protein [Source:PGSC_GENE;Acc:PGSC0003DMG402009879]

Coordinates

chr4:+:71104832..71107176

Molecular Weight (calculated)

39033.9 Da

IEP (calculated)

4.969

GRAVY (calculated)

-0.077

Length

353 amino acids

Sequence
(BLAST)

001: MVILNYFICF VLMLTIRSCE GKVQLPNNVV VKAVFAFGDS IVDQGNNNYI PTIAKCNFPP YGKDFNGGIP TGRFCNGKTP PDLIVEELGI KEYVPAYLDS
101: NLRSEDLKTG VSFASGGSGY DPRTSTLASA IPLSTQLNQF KEYIGKLEGL VGEEEANYIL KNSLFLVVVG SDDLANTYFT LGVRLKQDID SYTDLMVAKA
201: TEFLQELYNL GARKIGIFGI PPIGCLPSQR TLAGGPNREC AKEYNEAAQL ANTKFSIGID SLSKKLAQSK LVLIDIYNPF PDIIVNPQKY GLEEVEKGCC
301: GTGNIEVTIL CNKFSGTCED DTKYLFWDSY HPTEKGYRIL VDQILKKYVN RFL

Best Arabidopsis Sequence Match ( AT1G75900.1 )
(BLAST)

001: MKDNSSWSCS CSWSSWKICL LSVLFLTETI TAVKLPPKLI IPAVIAFGDS IVDTGMNNNV KTVVKCDFLP YGINFQSGVA TGRFCDGRVP ADLLAEELGI
101: KSIVPAYLDP NLKSKDLLTG VSFASGGSGY DPITPKLVAV ISLEDQLSYF EEYIEKVKNI VGEARKDFIV ANSLFLLVAG SDDIANTYYT LRARPEYDVD
201: SYTTLMSDSA SEFVTKLYGY GVRRVAVFGA PPIGCVPSQR TLGGGILRDC ADNYNEAAKL FNSKLSPKLD SLRKTLPGIK PIYINIYDPL FDIIQNPANY
301: GFEVSNKGCC GTGAIEVAVL CNKITSSVCP DVSTHVFWDS YHPTEKTYKV LVSLLINKFV NQFV

Arabidopsis Description

EXL3GDSL esterase/lipase EXL3 [Source:UniProtKB/Swiss-Prot;Acc:Q94CH6]
SUBAcon: [extracellular,plasma membrane,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.