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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 6
  • golgi 5
  • plasma membrane 7
  • endoplasmic reticulum 5
  • vacuole 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
EES02290
EES19830
OQU75676

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G75880.1 EES02290 AT3G16310.1 21798944
AT1G75880.1 EES19830 AT3G16310.1 21798944
AT1G75880.1 OQU75676 AT5G24290.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d014918_P001 Maize mitochondrion 67.05 73.84
Os02t0101400-01 Rice cytosol 39.85 73.76
HORVU6Hr1G001510.1 Barley endoplasmic reticulum, vacuole 46.93 63.64
TraesCS1A01G322600.1 Wheat mitochondrion 47.51 62.94
TraesCS1D01G322600.1 Wheat mitochondrion, plastid 47.51 62.94
TraesCS5A01G327300.1 Wheat cytosol 26.05 61.26
TraesCS6D01G002800.1 Wheat mitochondrion 47.89 61.12
TraesCS1B01G334900.1 Wheat plastid 49.62 60.94
TraesCS6B01G007700.1 Wheat plastid 48.08 60.05
GSMUA_Achr4P25550_001 Banana extracellular, golgi, vacuole 38.7 55.65
TraesCS6A01G002700.1 Wheat mitochondrion 48.85 54.37
KRH17463 Soybean endoplasmic reticulum, golgi 33.91 48.76
Bra015802.1-P Field mustard extracellular 33.72 48.62
CDX73211 Canola extracellular 33.72 48.62
CDX87651 Canola extracellular 33.72 48.62
Solyc04g081760.2.1 Tomato extracellular 24.52 48.3
VIT_18s0001g14810.t01 Wine grape cytosol 31.8 47.98
VIT_18s0001g14790.t01 Wine grape endoplasmic reticulum, golgi 32.95 47.91
EER90469 Sorghum extracellular, vacuole 34.67 47.88
AT1G75900.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 33.33 47.8
VIT_18s0001g14800.t01 Wine grape extracellular, golgi 33.14 47.53
Bra003736.1-P Field mustard extracellular, plasma membrane 32.95 47.51
CDX68113 Canola endoplasmic reticulum, plasma membrane 32.95 47.51
KRH05980 Soybean endoplasmic reticulum, golgi 32.95 47.38
VIT_18s0001g14760.t01 Wine grape extracellular 25.29 47.31
KRH51682 Soybean extracellular, golgi 32.95 47.25
CDX85929 Canola endoplasmic reticulum, plasma membrane 32.76 47.24
EER99270 Sorghum extracellular, plasma membrane 32.57 47.22
PGSC0003DMT400025568 Potato extracellular 31.61 47.14
KRH69753 Soybean extracellular, plasma membrane, vacuole 32.57 46.58
KRH61020 Soybean endoplasmic reticulum, golgi, plastid 32.38 46.43
Solyc04g081770.2.1 Tomato cytosol 30.27 46.33
Solyc04g081790.2.1 Tomato extracellular, plasma membrane 30.46 45.43
KRH08025 Soybean extracellular, vacuole 31.8 45.36
PGSC0003DMT400025569 Potato extracellular 30.65 45.33
Solyc06g048670.2.1 Tomato extracellular 30.65 45.33
Bra015803.1-P Field mustard cytosol 29.89 45.09
VIT_18s0001g14780.t01 Wine grape plasma membrane 28.93 44.94
KRH55990 Soybean extracellular, plasma membrane, vacuole 31.42 44.93
CDY42062 Canola cytosol 24.71 44.79
KRH28831 Soybean plasma membrane 31.23 44.54
KRH55991 Soybean extracellular 30.84 44.48
KRH55993 Soybean extracellular 30.84 44.48
AT3G14820.1 Thale cress extracellular, plasma membrane 29.89 44.44
CDX87652 Canola golgi, plasma membrane 30.46 43.8
CDY53562 Canola extracellular 20.69 43.55
PGSC0003DMT400070969 Potato extracellular 17.82 43.46
AT5G42170.1 Thale cress extracellular 30.65 43.36
CDY36116 Canola extracellular, plasma membrane 26.44 43.26
CDY51993 Canola plasma membrane 26.44 43.26
CDY41727 Canola extracellular 27.01 43.25
Solyc12g089350.1.1 Tomato extracellular, golgi 28.54 43.19
CDY09420 Canola extracellular 26.44 43.12
CDY20086 Canola extracellular, plasma membrane 28.74 42.98
CDY48852 Canola extracellular 26.82 42.94
CDY53577 Canola extracellular 26.82 42.94
PGSC0003DMT400075642 Potato extracellular 29.5 42.78
AT1G58725.1 Thale cress extracellular 28.54 42.69
AT1G59030.1 Thale cress extracellular, plasma membrane 28.54 42.69
AT1G59406.1 Thale cress extracellular 28.54 42.69
KRH61019 Soybean extracellular, plasma membrane 29.12 42.58
CDX73210 Canola golgi, mitochondrion, plasma membrane 30.08 42.55
CDY64565 Canola extracellular 26.05 42.5
CDX87653 Canola cytosol 24.9 42.48
Solyc04g081800.1.1 Tomato extracellular, plasma membrane 29.12 42.46
CDY32339 Canola extracellular, plasma membrane 28.54 42.45
Bra026636.1-P Field mustard extracellular 28.35 42.41
CDY41728 Canola extracellular 26.44 42.33
AT3G43570.1 Thale cress extracellular 25.86 42.19
Bra015804.1-P Field mustard cytosol 24.71 42.16
CDY65553 Canola extracellular 26.63 42.12
Bra027859.1-P Field mustard extracellular 28.16 42.12
AT1G58525.1 Thale cress extracellular 27.59 42.11
KRH17460 Soybean nucleus 29.12 41.99
Bra027858.1-P Field mustard extracellular 27.97 41.83
CDY70534 Canola plasma membrane 29.89 41.71
AT3G43550.1 Thale cress extracellular 22.99 41.67
Bra010987.1-P Field mustard plasma membrane 27.78 41.67
KRH17461 Soybean nucleus 29.31 41.58
CDY53576 Canola extracellular 26.63 41.49
KRH51681 Soybean extracellular, plasma membrane 28.35 41.46
CDX85928 Canola plasma membrane 29.69 41.44
Bra027951.1-P Field mustard extracellular 27.59 41.26
CDY71031 Canola cytosol 7.85 41.0
KRH05977 Soybean nucleus 29.12 40.86
KRH17462 Soybean extracellular, plasma membrane, plastid 28.54 40.6
KRH05976 Soybean nucleus 28.93 40.59
Solyc04g081780.2.1 Tomato extracellular 26.63 40.52
Bra027950.1-P Field mustard extracellular 27.01 40.29
Bra035295.1-P Field mustard mitochondrion 22.22 40.28
Bra003737.1-P Field mustard cytosol, plastid 24.71 40.06
KRH51683 Soybean plasma membrane 21.84 39.86
CDY02386 Canola golgi 29.5 39.29
KRH05978 Soybean plastid 28.35 39.26
KRH69760 Soybean extracellular 27.2 39.23
AT1G75880.1 Thale cress golgi, plasma membrane 28.16 39.2
EER97970 Sorghum plastid 28.74 39.06
CDY69331 Canola cytosol 19.16 38.76
AT1G75890.3 Thale cress plastid 29.31 38.73
OQU76903 Sorghum plastid 26.82 38.57
AT1G20120.1 Thale cress plasma membrane 29.69 38.56
KXG38464 Sorghum cytosol 31.42 38.5
KXG34395 Sorghum plastid 28.74 38.27
EER96404 Sorghum extracellular, vacuole 26.44 38.02
Bra012211.1-P Field mustard endoplasmic reticulum, plasma membrane 30.46 37.95
CDY57591 Canola endoplasmic reticulum, plasma membrane 30.46 37.95
EER88779 Sorghum extracellular, golgi, mitochondrion, plastid 27.59 37.8
KRH08023 Soybean extracellular 20.88 37.33
EER90082 Sorghum golgi 26.05 36.96
Bra016475.1-P Field mustard plastid 26.63 36.68
CDY44206 Canola plasma membrane 26.63 36.39
EES03823 Sorghum plasma membrane 24.14 36.1
EES16382 Sorghum extracellular, golgi 25.1 35.89
EER94394 Sorghum extracellular 24.52 35.85
AT1G20132.1 Thale cress extracellular, vacuole 26.05 35.51
OQU84537 Sorghum endoplasmic reticulum, extracellular 23.56 34.55
EES04670 Sorghum extracellular 24.33 33.69
OQU78161 Sorghum extracellular 24.33 32.73
CDY54336 Canola extracellular, golgi, plasma membrane 19.16 32.68
KXG26546 Sorghum mitochondrion, plastid 25.29 29.4
CDY12974 Canola golgi, mitochondrion 29.5 28.47
EER87686 Sorghum extracellular 23.18 27.25
CDY71376 Canola plastid 25.48 27.14
VIT_18s0001g14770.t01 Wine grape plastid 31.8 26.43
AT1G20130.1 Thale cress mitochondrion 25.67 25.09
CDY44205 Canola plasma membrane 23.75 22.46
PGSC0003DMT400025571 Potato cytosol, plasma membrane, plastid 28.16 20.88
KXG38704 Sorghum endoplasmic reticulum, plasma membrane 26.05 18.09
Bra012212.1-P Field mustard plastid 25.48 16.81
CDY29371 Canola plasma membrane 25.86 15.52
Bra025794.1-P Field mustard plasma membrane 25.86 15.17
CDY67439 Canola plasma membrane 25.86 15.05
Protein Annotations
Gene3D:3.40.50.1110MapMan:35.1UniProt:A0A1Z5RL05InterPro:GDSLGO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016788InterPro:IPR036514
EnsemblPlants:OQU84135ProteinID:OQU84135ProteinID:OQU84135.1PFAM:PF00657PANTHER:PTHR22835PANTHER:PTHR22835:SF182
InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_likeEnsemblPlantsGene:SORBI_3004G001200SUPFAM:SSF52266TMHMM:TMhelixUniParc:UPI000B424DCD
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr4:+:116059..118357
Molecular Weight (calculated)
56599.9 Da
IEP (calculated)
8.399
GRAVY (calculated)
0.095
Length
522 amino acids
Sequence
(BLAST)
001: MHDLLVLAPR CLIGLATLLD STAYIHALGV AVLRAQAAQA IYAVRCGAAF FFFFFFFFPN NIYRIDRSSR SVGPHSSALL LHFTSLHFTS FSSPLLSSPV
101: VAAVSSIHRG ARRDHLSILL YIHRSIDRPA GEQPKQRRQE EMWPVVLVVV LILFGGPVTS ASSAAGGGNN NATRAAGNNG GGNKPQHQKK PLAPALIVFG
201: DSIVDPGNNN DIRTIVKANF PPYGNDFQNH RPTGRFCNGR IPTDFIASRL GIKDLLPPYL SAQPLDKHDL LTGVSFASGG TGFDPLTPQL ASVISLPDQL
301: TMFHDYLAKV RDAAGVGDGD ARVSDILSRG VFAICAGSDD VANTYFTMRA RSNYDHASYA DLLVHHATAF VENLIRAGAR RVAFIGIPPI GCVPSQRTMS
401: GGLDRGCSQG HNEVAVAYNA GMVQQLAALR AKYPGTRLVF MDIYGFLYDM MMHPQSYGFT QSTRGCCGTG LLEVSVLCNA VTSAVCQDVG DYLFWDSYHP
501: TEKAYKVLAD FVFDNYVKLI LV
Best Arabidopsis Sequence Match ( AT1G75900.1 )
(BLAST)
001: MKDNSSWSCS CSWSSWKICL LSVLFLTETI TAVKLPPKLI IPAVIAFGDS IVDTGMNNNV KTVVKCDFLP YGINFQSGVA TGRFCDGRVP ADLLAEELGI
101: KSIVPAYLDP NLKSKDLLTG VSFASGGSGY DPITPKLVAV ISLEDQLSYF EEYIEKVKNI VGEARKDFIV ANSLFLLVAG SDDIANTYYT LRARPEYDVD
201: SYTTLMSDSA SEFVTKLYGY GVRRVAVFGA PPIGCVPSQR TLGGGILRDC ADNYNEAAKL FNSKLSPKLD SLRKTLPGIK PIYINIYDPL FDIIQNPANY
301: GFEVSNKGCC GTGAIEVAVL CNKITSSVCP DVSTHVFWDS YHPTEKTYKV LVSLLINKFV NQFV
Arabidopsis Description
EXL3GDSL esterase/lipase EXL3 [Source:UniProtKB/Swiss-Prot;Acc:Q94CH6]
SUBAcon: [extracellular,plasma membrane,endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.