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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 7
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
EpiLoc:plasma membrane
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:extracellular, plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d000061_P001 Maize extracellular, golgi 84.59 86.04
TraesCS5D01G171800.1 Wheat endoplasmic reticulum, extracellular, vacuole 66.95 65.84
Os09t0247600-01 Rice extracellular, golgi 65.55 65.73
TraesCS5A01G167400.1 Wheat endoplasmic reticulum, extracellular, vacuole 66.67 65.38
TraesCS5B01G164400.1 Wheat endoplasmic reticulum, vacuole 65.83 64.56
OQU76903 Sorghum plastid 53.78 52.89
EER96404 Sorghum extracellular, vacuole 51.26 50.41
EES16382 Sorghum extracellular, golgi 48.46 47.4
VIT_19s0090g01160.t01 Wine grape extracellular, golgi 44.82 46.51
Solyc07g049440.2.1 Tomato extracellular 45.38 45.76
AT4G26790.1 Thale cress extracellular, golgi 44.82 45.58
PGSC0003DMT400001826 Potato endoplasmic reticulum, extracellular, vacuole 45.1 45.22
Bra004735.1-P Field mustard extracellular 42.58 45.1
CDY29250 Canola extracellular 43.98 44.73
AT2G42990.1 Thale cress extracellular 43.7 44.57
KRH73314 Soybean endoplasmic reticulum, extracellular 43.7 44.57
CDX89302 Canola extracellular 43.7 44.44
Bra026402.1-P Field mustard extracellular 43.7 44.44
OQU84537 Sorghum endoplasmic reticulum, extracellular 44.26 44.38
CDY55498 Canola extracellular, plasma membrane 43.42 44.29
KRH14826 Soybean endoplasmic reticulum, extracellular 42.86 44.22
Solyc07g049430.2.1 Tomato extracellular 43.7 44.19
CDY53653 Canola extracellular, plasma membrane 43.14 44.0
KRH46013 Soybean extracellular 43.14 44.0
EES04670 Sorghum extracellular 46.22 43.77
KRH14825 Soybean nucleus 43.7 43.58
KRH73315 Soybean nucleus 43.7 43.58
KRH17906 Soybean endoplasmic reticulum, extracellular 42.58 43.55
PGSC0003DMT400038808 Potato golgi, plasma membrane 43.42 43.54
EER90082 Sorghum golgi 44.82 43.48
PGSC0003DMT400001828 Potato extracellular 42.86 43.34
KRG98969 Soybean extracellular 42.86 43.22
Solyc05g043330.2.1 Tomato plasma membrane 42.86 42.86
AT2G04570.1 Thale cress extracellular 41.74 42.57
CDX93056 Canola extracellular 41.74 42.33
CDY15057 Canola extracellular 41.74 42.33
Bra013200.1-P Field mustard extracellular 41.74 42.33
EER99270 Sorghum extracellular, plasma membrane 42.58 42.22
PGSC0003DMT400038810 Potato extracellular 40.62 40.96
KXG26546 Sorghum mitochondrion, plastid 47.06 37.42
OQU78161 Sorghum extracellular 38.66 35.57
Solyc05g043320.1.1 Tomato cytosol 22.69 35.53
EES03823 Sorghum plasma membrane 34.17 34.96
EER90469 Sorghum extracellular, vacuole 36.41 34.39
KXG38464 Sorghum cytosol 38.66 32.39
EER97970 Sorghum plastid 33.61 31.25
EER88779 Sorghum extracellular, golgi, mitochondrion, plastid 33.05 30.97
KXG34395 Sorghum plastid 33.33 30.36
EER87686 Sorghum extracellular 35.85 28.83
VIT_12s0059g01590.t01 Wine grape extracellular 45.66 24.77
OQU84135 Sorghum plasma membrane 35.85 24.52
KXG38704 Sorghum endoplasmic reticulum, plasma membrane 34.17 16.22
Protein Annotations
Gene3D:3.40.50.1110MapMan:35.1EntrezGene:8086257UniProt:C5WPW7ncoils:CoilEnsemblPlants:EER94394
ProteinID:EER94394ProteinID:EER94394.1InterPro:GDSLGO:GO:0003674GO:GO:0003824GO:GO:0016787
GO:GO:0016788InterPro:IPR036514PFAM:PF00657PANTHER:PTHR22835PANTHER:PTHR22835:SF315InterPro:SGNH_hydro_sf
InterPro:SGNH_plant_lipase_likeEnsemblPlantsGene:SORBI_3001G275400SUPFAM:SSF52266SignalP:SignalP-noTMUniParc:UPI0001A82DCDRefSeq:XP_002467396.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr1:-:53406758..53408450
Molecular Weight (calculated)
38827.6 Da
IEP (calculated)
8.339
GRAVY (calculated)
0.118
Length
357 amino acids
Sequence
(BLAST)
001: MTTTKVFLDM FLVLQLLLLL LLLRGAAADD SRVPAVIVFG DSTADTGNNN FIQTLLRGNY TPYGRDFAGG VATGRFSNGR LAADFVSQGL GLPPAVPAYL
101: DPGHSIHQLA SGVSFASAGS GFDDITAQIF SAVTLTQQIE HFKEYKEKLR RELGGAAANH TVASSLYLFS VGGSDYLGNY LLFPVRRYRF TLLEYEAYLV
201: GAAEAAVRAV YALGARRVRL PGLPPLGCLP LQRTVNLAAP GDCNRWHNMV ARRFNRGLRA MASRLSRELP GAQVVYVDVY RLLADVIATP WAYGFEDAVR
301: GCCGTGYFET GVLCSLDNAL TCRDADKYVF FDAVHPSQRA YKIIADAIVH AASHRPE
Best Arabidopsis Sequence Match ( AT2G04570.1 )
(BLAST)
001: MGHLKSLFTI LFLIAMSSTV TFAGKIPAII VFGDSSVDAG NNNYIPTVAR SNFEPYGRDF VGGKPTGRFC NGKIATDFMS EALGLKPIIP AYLDPSYNIS
101: DFATGVTFAS AATGYDNATS DVLSVLPLWK QLEYYKEYQT KLKAYQGKDR GTETIESSLY LISIGTNDFL ENYFAFPGRS SQYSVSLYQD FLAGIAKEFV
201: KKLHGLGARK ISLGGLPPMG CMPLERATNI GTGGECVGRY NDIAVQFNSK LDKMVEKLSK ELPGSNLVFS NPYEPFMRII KNPSSFGFEV VGAACCATGM
301: FEMGYGCQRN NPFTCTNADK YVFWDSFHPT QKTNHIMANA LMNSTFPHFL
Arabidopsis Description
GDSL esterase/lipase At2g04570 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJB4]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.