Factsheet for PGSC0003DMT400001828

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g049430.2.1	Tomato	extracellular	94.33	94.33
PGSC0003DMT400038808	Potato	golgi, plasma membrane	73.09	72.47
PGSC0003DMT400038810	Potato	extracellular	65.72	65.54
PGSC0003DMT400001826	Potato	endoplasmic reticulum, extracellular, vacuole	62.89	62.36
VIT_19s0090g01160.t01	Wine grape	extracellular, golgi	59.49	61.05
GSMUA_Achr7P05490_001	Banana	endoplasmic reticulum, extracellular	59.49	59.66
CDY29250	Canola	extracellular	56.94	57.27
AT4G26790.1	Thale cress	extracellular, golgi	56.94	57.27
Bra026402.1-P	Field mustard	extracellular	56.66	56.98
CDX89302	Canola	extracellular	56.37	56.7
GSMUA_Achr3P13030_001	Banana	endoplasmic reticulum, golgi	55.24	55.24
GSMUA_Achr2P05280_001	Banana	extracellular	49.58	55.2
GSMUA_Achr4P09480_001	Banana	endoplasmic reticulum, golgi	52.69	53.14
TraesCS6A01G172800.1	Wheat	extracellular, vacuole	51.27	53.08
TraesCS6B01G200400.1	Wheat	extracellular, plastid	50.99	52.33
GSMUA_Achr4P09470_001	Banana	extracellular	51.27	52.01
TraesCS6D01G161900.1	Wheat	endoplasmic reticulum	51.84	50.69
Zm00001d015637_P001	Maize	extracellular	50.99	50.14
Os02t0189300-01	Rice	endoplasmic reticulum, extracellular	51.56	50.0
TraesCS6B01G200500.1	Wheat	extracellular, golgi	50.14	49.72
OQU84537	Sorghum	endoplasmic reticulum, extracellular	50.14	49.72
TraesCS7D01G384600.1	Wheat	endoplasmic reticulum, extracellular, golgi	50.99	49.45
Os09t0132900-02	Rice	extracellular	49.29	49.43
TraesCS7B01G290600.1	Wheat	golgi	50.99	49.18
TraesCS7A01G388700.1	Wheat	extracellular	50.71	49.04
Zm00001d015636_P001	Maize	extracellular	50.14	49.03
HORVU6Hr1G035230.1	Barley	extracellular, golgi, mitochondrion	50.71	48.91
TraesCS6D01G162000.3	Wheat	extracellular, vacuole	49.29	48.88
EER90082	Sorghum	golgi	50.42	48.37
HORVU5Hr1G049650.2	Barley	extracellular, vacuole	49.29	48.33
HORVU0Hr1G012390.2	Barley	extracellular, vacuole	49.29	48.33
Os02t0189200-01	Rice	extracellular	51.56	48.28
TraesCS5A01G164200.1	Wheat	extracellular	48.73	48.18
Zm00001d036770_P001	Maize	mitochondrion	50.71	48.12
TraesCSU01G210200.1	Wheat	extracellular	47.88	48.01
TraesCS3A01G007800.1	Wheat	endoplasmic reticulum, extracellular	47.88	48.01
TraesCSU01G186900.1	Wheat	extracellular	47.88	48.01
TraesCS6A01G172900.1	Wheat	extracellular, golgi	48.44	47.77
TraesCS5D01G169100.1	Wheat	extracellular, golgi	48.44	47.77
Zm00001d019855_P001	Maize	extracellular, golgi	47.59	47.73
HORVU7Hr1G092040.2	Barley	golgi	49.86	47.7
TraesCSU01G187000.1	Wheat	extracellular	46.46	47.54
EES16382	Sorghum	extracellular, golgi	49.01	47.4
Os06t0636700-01	Rice	extracellular	51.27	47.38
TraesCS5B01G161700.1	Wheat	golgi	48.16	47.35
TraesCS3D01G002900.1	Wheat	plastid	47.31	46.65
Zm00001d046642_P001	Maize	extracellular, golgi	51.27	46.53
EES04670	Sorghum	extracellular	49.58	46.42
HORVU6Hr1G035210.2	Barley	cytosol, peroxisome	52.41	45.79
TraesCS5B01G161500.1	Wheat	extracellular	45.89	45.76
HORVU0Hr1G012230.2	Barley	extracellular, vacuole	45.61	45.61
Os09t0132200-01	Rice	extracellular	45.33	45.58
TraesCS5A01G164000.1	Wheat	extracellular, vacuole	45.61	45.48
TraesCS5D01G169000.1	Wheat	extracellular	45.33	45.2
Zm00001d014487_P001	Maize	plastid	46.18	44.78
OQU76903	Sorghum	plastid	45.89	44.63
Zm00001d000061_P001	Maize	extracellular, golgi	43.63	43.87
EER94394	Sorghum	extracellular	43.34	42.86
Zm00001d053252_P001	Maize	extracellular, golgi, mitochondrion	41.93	42.77
EER96404	Sorghum	extracellular, vacuole	43.91	42.7
Os09t0247600-01	Rice	extracellular, golgi	42.78	42.42
TraesCS5D01G171800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	42.78	41.6
PGSC0003DMT400068453	Potato	cytosol	40.23	41.16
TraesCS5A01G167400.1	Wheat	endoplasmic reticulum, extracellular, vacuole	42.21	40.93
TraesCS5B01G164400.1	Wheat	endoplasmic reticulum, vacuole	41.64	40.38
PGSC0003DMT400025568	Potato	extracellular	39.38	39.71
PGSC0003DMT400025569	Potato	extracellular	39.66	39.66
HORVU3Hr1G001200.2	Barley	mitochondrion	45.89	39.32
PGSC0003DMT400070969	Potato	extracellular	23.51	38.78
PGSC0003DMT400027838	Potato	extracellular	39.09	38.55
PGSC0003DMT400075642	Potato	extracellular	38.81	38.06
PGSC0003DMT400058744	Potato	plasma membrane	37.96	36.81
KXG26546	Sorghum	mitochondrion, plastid	45.61	35.86
VIT_12s0059g01590.t01	Wine grape	extracellular	64.59	34.65
PGSC0003DMT400086168	Potato	extracellular	29.75	33.12
PGSC0003DMT400025571	Potato	cytosol, plasma membrane, plastid	32.58	16.34
PGSC0003DMT400091356	Potato	cytosol, nucleus, plasma membrane	32.01	14.34

Protein Annotations

EnsemblPlants:PGSC0003DMT400001828	EnsemblPlantsGene:PGSC0003DMG400000686	EntrezGene:102580994	Gene3D:3.40.50.1110	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like
PANTHER:PTHR22835	PANTHER:PTHR22835:SF276	PFAM:PF00657	PGSC:PGSC0003DMG400000686	RefSeq:XP_006357972.1	SEG:seg
SignalP:SignalP-noTM	SUPFAM:SSF52266	UniParc:UPI00029677A6	UniProt:M0ZJ59	MapMan:35.1	:

Description

Zinc finger protein [Source:PGSC_GENE;Acc:PGSC0003DMG400000686]

Coordinates

chr7:+:45197551..45200009

Molecular Weight (calculated)

39645.3 Da

IEP (calculated)

4.947

GRAVY (calculated)

-0.078

Length

353 amino acids

Sequence
(BLAST)

001: MAYTTLISII LSHFLLLTTK TLAGKVPAII VFGDSSVDSG NNNQISTVLK SNFEPYGRDF YDKKPTGRFC NGRIPPDFIS EAFGLRPFVP AYLDPAFSIS
101: DFAEGVCFAS AGTGYDNATS DVLEVIPLWK EVEYYKEYQK KLEAYAGKKK AKYIIKESLY LISIGTNDFL ENYYSMQSQR SSQYTEDQFQ DFLVQLAQNF
201: VNQIYRMGAR KISLTGVPPM GCLPLERATN YVGGNGDGCN EKYNNVAKHF NVMLSDLVER LNEELTGIRV VFADAYNLLL QMITKPSSYG FEVSSVACCG
301: TGLFEMGFLC DKLSPLTCTD ANKFVFWDAF HVTDKTNHII SDFLMEHVLD QFL

Best Arabidopsis Sequence Match ( AT2G42990.1 )
(BLAST)

001: MATHYLSPSI LCIILTTLVS IAGAKIPAII VFGDSSVDSG NNNFISTMAR ANFEPYGRDF PGGRATGRFC NGRLSSDFTS EAYGLKPTVP AYLDPSYNIS
101: DFATGVCFAS AGTGYDNSTA DVLGVIPLWK EVEYFKEYQS NLSAYLGHRR AAKIIRESLY IVSIGTNDFL ENYYTLPDRR SQFSISQYQD FLVEIAEVFL
201: KDIYRLGARK MSFTGISPMG CLPLERVTNL DDPFSCARSY NDLAVDFNGR LRRLVTKLNR ELTGIKIYFA NPYDIMWDIV TKPNLYGLEI SSSACCGTGL
301: FEMGFLCGQD NPLTCSDANK FVFWDAFHPT ERTNQIVSDH FFKHLKNLFH

Arabidopsis Description

GDSL esterase/lipase At2g42990 [Source:UniProtKB/Swiss-Prot;Acc:Q67ZI9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.