Factsheet for PGSC0003DMT400058744

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g077340.1.1	Tomato	golgi, plasma membrane, vacuole	62.36	60.7
PGSC0003DMT400068453	Potato	cytosol	51.65	54.49
PGSC0003DMT400025568	Potato	extracellular	40.93	42.57
PGSC0003DMT400086168	Potato	extracellular	35.44	40.69
PGSC0003DMT400025569	Potato	extracellular	39.01	40.23
PGSC0003DMT400075642	Potato	extracellular	39.01	39.44
PGSC0003DMT400001828	Potato	extracellular	36.81	37.96
PGSC0003DMT400070969	Potato	extracellular	21.98	37.38
PGSC0003DMT400001826	Potato	endoplasmic reticulum, extracellular, vacuole	36.26	37.08
PGSC0003DMT400038808	Potato	golgi, plasma membrane	35.44	36.24
PGSC0003DMT400027838	Potato	extracellular	34.34	34.92
PGSC0003DMT400038810	Potato	extracellular	33.52	34.46
PGSC0003DMT400025571	Potato	cytosol, plasma membrane, plastid	32.14	16.62
PGSC0003DMT400091356	Potato	cytosol, nucleus, plasma membrane	35.16	16.24

Protein Annotations

EnsemblPlants:PGSC0003DMT400058744	EnsemblPlantsGene:PGSC0003DMG400022820	EntrezGene:102595717	Gene3D:3.40.50.1110	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like
PANTHER:PTHR22835	PANTHER:PTHR22835:SF261	PFAM:PF00657	PGSC:PGSC0003DMG400022820	RefSeq:XP_006361071.1	SEG:seg
SignalP:SignalP-noTM	SUPFAM:SSF52266	UniParc:UPI000294CB6C	UniProt:M1C384	MapMan:35.1	:

Description

GDSL esterase/lipase [Source:PGSC_GENE;Acc:PGSC0003DMG400022820]

Coordinates

chr10:-:4477074..4481750

Molecular Weight (calculated)

40924.4 Da

IEP (calculated)

6.879

GRAVY (calculated)

0.030

Length

364 amino acids

Sequence
(BLAST)

001: MIFPCKFILF LPILLIIIFQ NKIQGRTLLL NNNNNTVSAV FVFGDSTVDS GNNNYINTIA KCDFPPYGRD FANHVPTGRF TNGRLVTDYL ASYVGIKDFV
101: PPYLDPSLSL DELMTGVSFA SGSSGFDPLT AQLVDVITME KQLEYFKEYK RKLENSIGKE KTKLLISKAA FIISAGTNDF VVNYYNTPFR RQKYYNVSQY
201: QQFLMQMVQQ FIQGLMNEGA RVIGVAGVPP FGCLPIVITI DSGDALQPRR CIESYSAVAR EYNSLLQRLL KTMEIHGTKL FYVDIYDPIN DMIQNPINYG
301: FSEVTMGCCG SGLIEASILC NPKSIVCNNP SNHMFWDAVH PSQATYYTVF QAIRPSIDFA INQL

Best Arabidopsis Sequence Match ( AT5G45960.1 )
(BLAST)

001: MRSHHRHFSS YVSFILFLFL FFISFSSSTS KLEPAKSEPK RKHSVSAILV FGDSTVDPGN NNYIDTVFKC NFPPYGLDFR NKTPTGRFCN GRLVTDFIAS
101: YIGVKENVPP YLDPNLGINE LISGVSFASA GSGYDPLTPT ITNVIDIPTQ LEYFREYKRK LEGKMGKQEM EKHIEEAMFC VSAGTNDFVI NYFTIPIRRK
201: TFTIEAYQQF VISNLKQFIQ GLWKEGARKI TVAGLPPIGC LPIVITLFSG EALTNRRCID RFSTVATNYN FLLQKQLALM QVGLAHLGSK IFYLDVYNPV
301: YEVIRDPRKF GFEEVFSGCC GSGYLEASFL CNPKSYVCPN TSAYVFFDSI HPSEKTYFSL FRSLRPIYDS ILGSF

Arabidopsis Description

GDSL esterase/lipase At5g45960 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ40]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.