Factsheet for Solyc02g077340.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	golgi
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400058744	Potato	plasma membrane	60.7	62.36
Solyc10g008810.2.1	Tomato	extracellular	49.73	51.81
Solyc10g008820.2.1	Tomato	endoplasmic reticulum, extracellular, vacuole	46.52	48.6
Solyc04g081760.2.1	Tomato	extracellular	29.95	42.26
Solyc09g030370.2.1	Tomato	extracellular	39.3	41.64
Solyc04g081770.2.1	Tomato	cytosol	37.43	41.06
Solyc07g049440.2.1	Tomato	extracellular	37.43	39.55
Solyc04g007440.1.1	Tomato	extracellular, golgi, vacuole	37.97	39.34
Solyc12g089350.1.1	Tomato	extracellular, golgi	36.1	39.13
Solyc04g081790.2.1	Tomato	extracellular, plasma membrane	36.36	38.86
Solyc07g049430.2.1	Tomato	extracellular	36.36	38.53
Solyc04g081780.2.1	Tomato	extracellular	34.76	37.9
Solyc05g043330.2.1	Tomato	plasma membrane	35.56	37.25
Solyc04g081800.1.1	Tomato	extracellular, plasma membrane	35.56	37.15
Solyc06g048670.2.1	Tomato	extracellular	35.03	37.11
Solyc12g010560.1.1	Tomato	extracellular	32.09	36.81
Solyc02g077330.2.1	Tomato	extracellular, golgi	32.35	33.61
Solyc05g043320.1.1	Tomato	cytosol	20.32	33.33

Protein Annotations

EnsemblPlants:Solyc02g077340.1.1	EnsemblPlantsGene:Solyc02g077340.1	Gene3D:3.40.50.1110	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787
GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	PANTHER:PTHR22835
PANTHER:PTHR22835:SF261	PFAM:PF00657	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52266	TMHMM:TMhelix
UniParc:UPI0002767B25	UniProt:K4B8W1	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr2:-:42306538..42309194

Molecular Weight (calculated)

42042.1 Da

IEP (calculated)

6.971

GRAVY (calculated)

0.011

Length

374 amino acids

Sequence
(BLAST)

001: MKCSCHVMFL RYSPVLLFLI FIISSNIKGE TGTLTKKNVL IRPFNNTISA IFVFGDSTVD PGNNNCRPTV TKSNFPPYGR DFVNHIPTGR FTNGRLVTDM
101: TASYIGLKEF VPPYLDPILS LEELMTGVSF ASGGSGLDPL TAQISGVIPL EQQLEYFKEY KIRVENEIGE EKTKLLISKA MFLISAGTND FVINYFNTHL
201: RRHSNTLLDY QQFLLQLTQQ FLKDLMTEGA RVIGIVGLPP MGCLPVVITM KTAGSPLQPR QCIDSYSEVG KEYNQLLQNM LKNMNTYDTK IIYADIYSPL
301: YDMVQNPNKY GFNNVYSGCC GTGLFELALL CNPNSLVCIN ASEYIFWDAV HPTQATYYNL FNSLRPTVDV MLKL

Best Arabidopsis Sequence Match ( AT5G45960.1 )
(BLAST)

001: MRSHHRHFSS YVSFILFLFL FFISFSSSTS KLEPAKSEPK RKHSVSAILV FGDSTVDPGN NNYIDTVFKC NFPPYGLDFR NKTPTGRFCN GRLVTDFIAS
101: YIGVKENVPP YLDPNLGINE LISGVSFASA GSGYDPLTPT ITNVIDIPTQ LEYFREYKRK LEGKMGKQEM EKHIEEAMFC VSAGTNDFVI NYFTIPIRRK
201: TFTIEAYQQF VISNLKQFIQ GLWKEGARKI TVAGLPPIGC LPIVITLFSG EALTNRRCID RFSTVATNYN FLLQKQLALM QVGLAHLGSK IFYLDVYNPV
301: YEVIRDPRKF GFEEVFSGCC GSGYLEASFL CNPKSYVCPN TSAYVFFDSI HPSEKTYFSL FRSLRPIYDS ILGSF

Arabidopsis Description

GDSL esterase/lipase At5g45960 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ40]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.