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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • mitochondrion 2
  • cytosol 3
  • extracellular 2
  • golgi 1
  • plasma membrane 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, secretory
BaCelLo:nucleus
EpiLoc:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:extracellular
PProwler:mitochondrion
TargetP:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Solyc02g071920.2.1
Solyc03g005980.2.1
Solyc03g096800.2.1
Solyc03g120880.2.1
Solyc09g059460.2.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G75880.1 Solyc03g120880.2.1 AT3G16310.1 21798944
AT1G75880.1 Solyc02g071920.2.1 AT4G19030.1 21798944
AT1G75880.1 Solyc03g005980.2.1 AT4G19030.1 21798944
AT1G75880.1 Solyc03g096800.2.1 AT5G24290.1 21798944
AT1G75880.1 Solyc09g059460.2.1 AT5G24290.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400025569 Potato extracellular 95.89 92.63
Solyc04g081760.2.1 Tomato extracellular 60.12 77.36
Solyc12g089350.1.1 Tomato extracellular, golgi 72.73 71.88
Solyc06g048670.2.1 Tomato extracellular 65.1 62.89
VIT_18s0001g14760.t01 Wine grape extracellular 46.63 56.99
Solyc04g081780.2.1 Tomato extracellular 57.18 56.85
KRH05980 Soybean endoplasmic reticulum, golgi 60.41 56.75
KRH51682 Soybean extracellular, golgi 60.41 56.59
KRH61020 Soybean endoplasmic reticulum, golgi, plastid 60.12 56.32
VIT_18s0001g14790.t01 Wine grape endoplasmic reticulum, golgi 59.24 56.27
KRH17463 Soybean endoplasmic reticulum, golgi 59.82 56.2
Solyc04g081790.2.1 Tomato extracellular, plasma membrane 57.48 56.0
VIT_18s0001g14810.t01 Wine grape cytosol 56.6 55.78
CDX87653 Canola cytosol 49.27 54.9
Bra015804.1-P Field mustard cytosol 48.97 54.58
VIT_18s0001g14780.t01 Wine grape plasma membrane 52.79 53.57
KRH17461 Soybean nucleus 57.48 53.26
Bra015803.1-P Field mustard cytosol 53.67 52.89
KRH17460 Soybean nucleus 56.01 52.76
KRH05977 Soybean nucleus 57.48 52.69
Bra003736.1-P Field mustard extracellular, plasma membrane 55.72 52.49
CDX85929 Canola endoplasmic reticulum, plasma membrane 55.72 52.49
KRH61019 Soybean extracellular, plasma membrane 54.84 52.38
CDX68113 Canola endoplasmic reticulum, plasma membrane 55.43 52.21
CDX73211 Canola extracellular 55.43 52.21
Bra015802.1-P Field mustard extracellular 55.13 51.93
CDX87651 Canola extracellular 55.13 51.93
VIT_18s0001g14800.t01 Wine grape extracellular, golgi 55.13 51.65
KRH05976 Soybean nucleus 56.01 51.34
KRH51681 Soybean extracellular, plasma membrane 53.67 51.26
KRH17462 Soybean extracellular, plasma membrane, plastid 55.13 51.23
AT1G75900.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 54.55 51.1
GSMUA_Achr11P... Banana endoplasmic reticulum, vacuole 48.97 50.45
KRH51683 Soybean plasma membrane 42.23 50.35
CDX87652 Canola golgi, plasma membrane 53.37 50.14
Bra003737.1-P Field mustard cytosol, plastid 47.21 50.0
Solyc04g081800.1.1 Tomato extracellular, plasma membrane 52.49 50.0
KRH05978 Soybean plastid 55.13 49.87
CDX73210 Canola golgi, mitochondrion, plasma membrane 53.37 49.32
GSMUA_Achr5P11240_001 Banana extracellular, golgi 52.2 49.31
CDY70534 Canola plasma membrane 53.96 49.2
CDX85928 Canola plasma membrane 53.67 48.93
AT1G75880.1 Thale cress golgi, plasma membrane 53.37 48.53
CDY69331 Canola cytosol 36.36 48.06
CDY42062 Canola cytosol 40.47 47.92
GSMUA_Achr4P25550_001 Banana extracellular, golgi, vacuole 50.73 47.66
CDY53562 Canola extracellular 34.6 47.58
EER99270 Sorghum extracellular, plasma membrane 50.15 47.5
AT3G14820.1 Thale cress extracellular, plasma membrane 48.09 46.72
CDY20086 Canola extracellular, plasma membrane 47.8 46.7
CDY32339 Canola extracellular, plasma membrane 47.8 46.44
AT5G42170.1 Thale cress extracellular 49.85 46.07
Bra035295.1-P Field mustard mitochondrion 38.71 45.83
Os09t0540400-02 Rice extracellular, plasma membrane 48.97 45.63
CDY65553 Canola extracellular 43.99 45.45
Bra027858.1-P Field mustard extracellular 46.33 45.27
Os10t0438600-01 Rice plasma membrane 46.92 44.69
CDY48852 Canola extracellular 42.52 44.48
Bra027859.1-P Field mustard extracellular 45.45 44.41
Zm00001d032888_P001 Maize mitochondrion 47.51 44.38
AT3G43550.1 Thale cress extracellular 37.24 44.1
AT1G75890.3 Thale cress plastid 51.03 44.05
AT1G58525.1 Thale cress extracellular 43.99 43.86
Bra016475.1-P Field mustard plastid 48.68 43.8
GSMUA_Achr4P25560_001 Banana extracellular, golgi 46.92 43.6
AT1G58725.1 Thale cress extracellular 44.28 43.27
AT1G59030.1 Thale cress extracellular, plasma membrane 44.28 43.27
AT1G59406.1 Thale cress extracellular 44.28 43.27
CDY36116 Canola extracellular, plasma membrane 40.47 43.26
AT3G43570.1 Thale cress extracellular 40.47 43.12
Os02t0101400-01 Rice cytosol 35.48 42.91
TraesCS7A01G339400.1 Wheat extracellular 43.99 42.86
GSMUA_Achr4P25720_001 Banana vacuole 45.45 42.82
AT1G20120.1 Thale cress plasma membrane 50.44 42.79
Os03t0859100-01 Rice golgi 45.75 42.74
TraesCS7B01G250800.1 Wheat extracellular 43.7 42.57
CDY09420 Canola extracellular 39.88 42.5
TraesCS5A01G327300.1 Wheat cytosol 27.57 42.34
HORVU6Hr1G001510.1 Barley endoplasmic reticulum, vacuole 47.8 42.34
CDY53577 Canola extracellular 40.47 42.33
CDY51993 Canola plasma membrane 39.59 42.32
Bra010987.1-P Field mustard plasma membrane 43.11 42.24
TraesCS1A01G135900.1 Wheat plastid 46.04 42.2
CDY64565 Canola extracellular 39.59 42.19
TraesCS6A01G111000.1 Wheat extracellular, golgi 43.4 42.17
TraesCS6B01G139100.1 Wheat extracellular, golgi 43.4 42.17
EER90469 Sorghum extracellular, vacuole 46.63 42.06
CDY41727 Canola extracellular 40.18 42.02
TraesCS7D01G347000.1 Wheat extracellular 43.11 42.0
Bra026636.1-P Field mustard extracellular 42.82 41.83
TraesCS1D01G138700.1 Wheat endoplasmic reticulum, vacuole 45.75 41.82
Os06t0351500-01 Rice endoplasmic reticulum, golgi, mitochondrion, plastid 46.33 41.8
HORVU1Hr1G036440.1 Barley endoplasmic reticulum, extracellular, plastid 45.45 41.67
TraesCS1B01G156300.1 Wheat endoplasmic reticulum, plasma membrane, plastid 45.45 41.67
CDY02386 Canola golgi 47.8 41.58
Bra012211.1-P Field mustard endoplasmic reticulum, plasma membrane 51.03 41.53
CDY57591 Canola endoplasmic reticulum, plasma membrane 51.03 41.53
AT1G20132.1 Thale cress extracellular, vacuole 46.63 41.51
Zm00001d022615_P001 Maize mitochondrion, plasma membrane 49.85 41.46
CDY41728 Canola extracellular 39.59 41.41
TraesCS1A01G322600.1 Wheat mitochondrion 47.8 41.37
Solyc10g008810.2.1 Tomato extracellular 43.4 41.23
CDY71031 Canola cytosol 12.02 41.0
Bra027951.1-P Field mustard extracellular 41.94 40.97
TraesCS1D01G322600.1 Wheat mitochondrion, plastid 47.21 40.86
TraesCS7B01G250700.1 Wheat extracellular, vacuole 42.23 40.79
TraesCS7D01G346700.1 Wheat extracellular 42.23 40.56
TraesCS2A01G477400.1 Wheat golgi, vacuole 43.11 40.5
TraesCS4A01G316500.1 Wheat golgi 44.28 40.48
TraesCS6D01G002800.1 Wheat mitochondrion 48.39 40.34
TraesCS4A01G303600.1 Wheat cytosol 24.93 40.28
Zm00001d034917_P001 Maize mitochondrion 44.28 40.16
EER88779 Sorghum extracellular, golgi, mitochondrion, plastid 44.87 40.16
CDY44206 Canola plasma membrane 44.87 40.05
Bra027950.1-P Field mustard extracellular 41.06 40.0
CDY53576 Canola extracellular 39.3 40.0
Solyc09g030370.2.1 Tomato extracellular 41.35 39.94
TraesCS5B01G562600.1 Wheat golgi, mitochondrion 43.4 39.89
TraesCS5D01G566800.1 Wheat endoplasmic reticulum, golgi 43.4 39.89
Solyc07g049440.2.1 Tomato extracellular 41.35 39.83
TraesCS4B01G010200.1 Wheat endoplasmic reticulum 43.11 39.73
HORVU7Hr1G083440.4 Barley extracellular 41.35 39.72
HORVU5Hr1G125000.1 Barley vacuole 43.11 39.62
EER97970 Sorghum plastid 44.57 39.58
HORVU7Hr1G083530.2 Barley golgi 43.99 39.58
Os10t0140300-01 Rice plasma membrane 40.47 39.54
TraesCS2D01G476600.1 Wheat mitochondrion 43.11 39.3
CDY54336 Canola extracellular, golgi, plasma membrane 35.19 39.22
TraesCS2B01G500500.1 Wheat mitochondrion 42.82 39.04
Solyc05g043330.2.1 Tomato plasma membrane 40.76 38.94
TraesCS6B01G007700.1 Wheat plastid 47.51 38.76
KXG38464 Sorghum cytosol 48.09 38.5
TraesCS6B01G133500.1 Wheat extracellular 40.76 38.29
Solyc07g049430.2.1 Tomato extracellular 39.59 38.24
TraesCS1B01G334900.1 Wheat plastid 47.51 38.12
Zm00001d018791_P001 Maize plastid 43.4 38.05
Solyc10g008820.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 39.88 37.99
TraesCS2B01G297300.1 Wheat plasma membrane 39.0 37.89
TraesCS2D01G278500.1 Wheat plasma membrane, vacuole 39.0 37.89
TraesCS5B01G562700.1 Wheat golgi 42.52 37.86
TraesCS6D01G093000.1 Wheat extracellular, plasma membrane 40.47 37.7
Solyc02g077340.1.1 Tomato golgi, plasma membrane, vacuole 41.06 37.43
TraesCS6A01G104300.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 41.06 37.43
KXG34395 Sorghum plastid 42.82 37.24
TraesCS4A01G316400.1 Wheat mitochondrion 42.23 37.21
Solyc04g007440.1.1 Tomato extracellular, golgi, vacuole 38.71 36.57
HORVU6Hr1G018750.1 Barley endoplasmic reticulum, plasma membrane 41.06 35.99
TraesCS5D01G566700.1 Wheat mitochondrion 42.52 35.98
HORVU2Hr1G107400.3 Barley mitochondrion 23.46 35.87
TraesCS7D01G346900.1 Wheat endoplasmic reticulum, plasma membrane, plastid 25.22 35.83
HORVU5Hr1G124980.2 Barley plastid 42.52 35.45
HORVU2Hr1G068430.1 Barley endoplasmic reticulum, mitochondrion, plasma membrane 39.3 35.45
TraesCS6A01G002700.1 Wheat mitochondrion 48.68 35.39
Solyc05g043320.1.1 Tomato cytosol 22.87 34.21
Solyc12g010560.1.1 Tomato extracellular 32.55 34.05
Solyc02g077330.2.1 Tomato extracellular, golgi 35.48 33.61
Zm00001d014918_P001 Maize mitochondrion 46.63 33.54
TraesCS7A01G339300.1 Wheat cytosol 26.69 33.33
VIT_18s0001g14770.t01 Wine grape plastid 58.94 32.01
CDY71376 Canola plastid 43.99 30.61
OQU84135 Sorghum plasma membrane 46.33 30.27
CDY12974 Canola golgi, mitochondrion 47.21 29.76
AT1G20130.1 Thale cress mitochondrion 42.23 26.97
CDY44205 Canola plasma membrane 39.88 24.64
Zm00001d014308_P001 Maize endoplasmic reticulum 39.3 20.52
Bra012212.1-P Field mustard plastid 43.4 18.71
KXG38704 Sorghum endoplasmic reticulum, plasma membrane 39.59 17.95
CDY67439 Canola plasma membrane 43.99 16.72
CDY29371 Canola plasma membrane 41.64 16.32
Bra025794.1-P Field mustard plasma membrane 41.35 15.84
Protein Annotations
EnsemblPlants:Solyc04g081770.2.1EnsemblPlantsGene:Solyc04g081770.2Gene3D:3.40.50.1110GO:GO:0003674GO:GO:0003824GO:GO:0016787
GO:GO:0016788InterPro:GDSLInterPro:IPR036514InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_likePANTHER:PTHR22835
PANTHER:PTHR22835:SF471PFAM:PF00657SUPFAM:SSF52266UniParc:UPI000276626EUniProt:K4BVQ6MapMan:35.1
Description
No Description!
Coordinates
chr4:+:65689952..65692175
Molecular Weight (calculated)
37711.2 Da
IEP (calculated)
5.095
GRAVY (calculated)
-0.136
Length
341 amino acids
Sequence
(BLAST)
001: MSTIRSCEGK VQLPNNVVVK AVFAFGDSIV DQGNNNYIPT IAKCNFPPYG KDFNGGIPTG RFCNGKTPPD LIVEELGIKE YIPAYLDSNL RNEDLKTGVS
101: FASGGCGYDP RTSTLALAIP LSTQLNQFKE YIGKLEGLVG EEEANYILKN SLFLVVAGSD DLANTYFTLE VRLKQNIDSY TDLMVSKATE FFQELYNLGA
201: RKIGIFGIPP IGCLPSQRTL AGGPNRVCAK EYNEAAQLAN TKFSIAIDSL SKKLAQSKLV LIDIYNPFLD IIVNPQKYGL EEVEKGCCGT GNIEVTILCN
301: KFSGTCEDDT KYLFWDSFHP TEKGYRILVD QILKKYVNRF L
Best Arabidopsis Sequence Match ( AT1G75900.1 )
(BLAST)
001: MKDNSSWSCS CSWSSWKICL LSVLFLTETI TAVKLPPKLI IPAVIAFGDS IVDTGMNNNV KTVVKCDFLP YGINFQSGVA TGRFCDGRVP ADLLAEELGI
101: KSIVPAYLDP NLKSKDLLTG VSFASGGSGY DPITPKLVAV ISLEDQLSYF EEYIEKVKNI VGEARKDFIV ANSLFLLVAG SDDIANTYYT LRARPEYDVD
201: SYTTLMSDSA SEFVTKLYGY GVRRVAVFGA PPIGCVPSQR TLGGGILRDC ADNYNEAAKL FNSKLSPKLD SLRKTLPGIK PIYINIYDPL FDIIQNPANY
301: GFEVSNKGCC GTGAIEVAVL CNKITSSVCP DVSTHVFWDS YHPTEKTYKV LVSLLINKFV NQFV
Arabidopsis Description
EXL3GDSL esterase/lipase EXL3 [Source:UniProtKB/Swiss-Prot;Acc:Q94CH6]
SUBAcon: [extracellular,plasma membrane,endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.