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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • mitochondrion 1
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:golgi, mitochondrion
iPSORT:mitochondrion
MultiLoc:golgi
YLoc:golgi
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU1Hr1G076010.1
HORVU3Hr1G026980.2
HORVU3Hr1G071060.1
HORVU7Hr1G003870.3
HORVU7Hr1G003880.2
HORVU7Hr1G088900.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G75880.1 HORVU1Hr1G076010.1 AT3G16310.1 21798944
AT1G75880.1 HORVU3Hr1G026980.2 AT3G16310.1 21798944
AT1G75880.1 HORVU3Hr1G071060.1 AT3G16310.1 21798944
AT1G75880.1 HORVU7Hr1G088900.1 AT4G19030.1 21798944
AT1G75880.1 HORVU7Hr1G003870.3 AT5G24290.1 21798944
AT1G75880.1 HORVU7Hr1G003880.2 AT5G24290.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7A01G339400.1 Wheat extracellular 87.6 94.86
TraesCS7B01G250800.1 Wheat extracellular 86.81 94.0
TraesCS7D01G347000.1 Wheat extracellular 86.54 93.71
TraesCS6A01G111000.1 Wheat extracellular, golgi 84.43 91.17
TraesCS6B01G139100.1 Wheat extracellular, golgi 84.17 90.88
HORVU7Hr1G083440.4 Barley extracellular 70.45 75.21
TraesCS7D01G346900.1 Wheat endoplasmic reticulum, plasma membrane, plastid 46.17 72.92
Os06t0351500-01 Rice endoplasmic reticulum, golgi, mitochondrion, plastid 62.53 62.7
Solyc04g081790.2.1 Tomato extracellular, plasma membrane 43.54 47.14
VIT_18s0001g14810.t01 Wine grape cytosol 41.42 45.38
KRH17461 Soybean nucleus 43.27 44.57
VIT_18s0001g14790.t01 Wine grape endoplasmic reticulum, golgi 41.95 44.29
CDX87653 Canola cytosol 35.62 44.12
VIT_18s0001g14760.t01 Wine grape extracellular 32.45 44.09
Solyc04g081770.2.1 Tomato cytosol 39.58 43.99
Bra015804.1-P Field mustard cytosol 35.36 43.79
CDY51993 Canola plasma membrane 36.68 43.57
PGSC0003DMT400070969 Potato extracellular 24.54 43.46
KRH17460 Soybean nucleus 41.42 43.37
KRH17462 Soybean extracellular, plasma membrane, plastid 41.95 43.32
KRH05977 Soybean nucleus 42.48 43.28
CDY36116 Canola extracellular, plasma membrane 36.41 43.26
KRH17463 Soybean endoplasmic reticulum, golgi 41.42 43.25
VIT_18s0001g14780.t01 Wine grape plasma membrane 38.26 43.15
KRH51682 Soybean extracellular, golgi 41.42 43.13
KRH51683 Soybean plasma membrane 32.45 43.01
KRH05980 Soybean endoplasmic reticulum, golgi 41.16 42.98
KRH28831 Soybean plasma membrane 41.42 42.9
KRH61020 Soybean endoplasmic reticulum, golgi, plastid 41.16 42.86
KRH55991 Soybean extracellular 40.9 42.82
KRH55993 Soybean extracellular 40.9 42.82
Bra010987.1-P Field mustard plasma membrane 39.31 42.82
PGSC0003DMT400025569 Potato extracellular 39.84 42.78
Solyc04g081800.1.1 Tomato extracellular, plasma membrane 40.37 42.74
KRH05978 Soybean plastid 42.48 42.71
Solyc12g089350.1.1 Tomato extracellular, golgi 38.79 42.61
Bra015803.1-P Field mustard cytosol 38.79 42.49
VIT_18s0001g14800.t01 Wine grape extracellular, golgi 40.63 42.31
PGSC0003DMT400025568 Potato extracellular 39.05 42.29
KRH55990 Soybean extracellular, plasma membrane, vacuole 40.63 42.19
CDY42062 Canola cytosol 31.93 42.01
Solyc04g081760.2.1 Tomato extracellular 29.29 41.89
HORVU1Hr1G036440.1 Barley endoplasmic reticulum, extracellular, plastid 40.9 41.67
KRH05976 Soybean nucleus 40.9 41.67
Solyc06g048670.2.1 Tomato extracellular 38.79 41.64
PGSC0003DMT400075642 Potato extracellular 39.31 41.39
CDY64565 Canola extracellular 34.83 41.25
Bra003736.1-P Field mustard extracellular, plasma membrane 39.31 41.16
CDX85929 Canola endoplasmic reticulum, plasma membrane 39.31 41.16
CDY41727 Canola extracellular 35.36 41.1
CDX87652 Canola golgi, plasma membrane 39.31 41.05
AT3G43570.1 Thale cress extracellular 34.56 40.94
CDY09420 Canola extracellular 34.56 40.94
AT1G58525.1 Thale cress extracellular 36.94 40.94
CDX68113 Canola endoplasmic reticulum, plasma membrane 39.05 40.88
CDY48852 Canola extracellular 35.09 40.8
CDY53577 Canola extracellular 35.09 40.8
AT3G14820.1 Thale cress extracellular, plasma membrane 37.73 40.74
AT1G58725.1 Thale cress extracellular 37.47 40.69
AT1G59030.1 Thale cress extracellular, plasma membrane 37.47 40.69
AT1G59406.1 Thale cress extracellular 37.47 40.69
Bra027858.1-P Field mustard extracellular 37.47 40.69
AT3G43550.1 Thale cress extracellular 30.87 40.62
KRH61019 Soybean extracellular, plasma membrane 38.26 40.62
CDY65553 Canola extracellular 35.36 40.61
AT1G75880.1 Thale cress golgi, plasma membrane 40.11 40.53
Solyc04g081780.2.1 Tomato extracellular 36.68 40.52
CDY41728 Canola extracellular 34.83 40.49
AT5G42170.1 Thale cress extracellular 39.31 40.38
CDX73210 Canola golgi, mitochondrion, plasma membrane 39.31 40.38
Bra003737.1-P Field mustard cytosol, plastid 34.3 40.37
KRH51681 Soybean extracellular, plasma membrane 37.99 40.34
Bra015802.1-P Field mustard extracellular 38.52 40.33
CDX73211 Canola extracellular 38.52 40.33
CDX87651 Canola extracellular 38.52 40.33
KRH08025 Soybean extracellular, vacuole 38.79 40.16
Bra027859.1-P Field mustard extracellular 36.94 40.11
CDX85928 Canola plasma membrane 39.58 40.11
CDY70534 Canola plasma membrane 39.58 40.11
KRH69753 Soybean extracellular, plasma membrane, vacuole 38.52 40.0
CDY32339 Canola extracellular, plasma membrane 36.94 39.89
Bra026636.1-P Field mustard extracellular 36.68 39.83
CDY20086 Canola extracellular, plasma membrane 36.68 39.83
Bra027951.1-P Field mustard extracellular 36.41 39.54
HORVU6Hr1G001510.1 Barley endoplasmic reticulum, vacuole 40.11 39.48
CDY53576 Canola extracellular 34.83 39.4
HORVU5Hr1G125000.1 Barley vacuole 38.52 39.35
AT1G75900.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 37.47 39.01
Bra027950.1-P Field mustard extracellular 35.88 38.86
CDY53562 Canola extracellular 25.33 38.71
HORVU2Hr1G107400.3 Barley mitochondrion 22.43 38.12
Bra035295.1-P Field mustard mitochondrion 28.76 37.85
KRH69760 Soybean extracellular 36.15 37.85
CDY02386 Canola golgi 39.05 37.76
AT1G75890.3 Thale cress plastid 38.52 36.96
HORVU0Hr1G012230.2 Barley extracellular, vacuole 34.04 36.54
HORVU2Hr1G068430.1 Barley endoplasmic reticulum, mitochondrion, plasma membrane 36.41 36.51
KRH08023 Soybean extracellular 27.7 35.96
AT1G20132.1 Thale cress extracellular, vacuole 35.88 35.51
HORVU6Hr1G018750.1 Barley endoplasmic reticulum, plasma membrane 36.41 35.48
HORVU5Hr1G124980.2 Barley plastid 38.26 35.45
CDY44206 Canola plasma membrane 35.62 35.34
AT1G20120.1 Thale cress plasma membrane 37.2 35.07
HORVU3Hr1G088120.3 Barley cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 34.56 34.66
HORVU7Hr1G092040.2 Barley golgi 32.72 33.6
Bra012211.1-P Field mustard endoplasmic reticulum, plasma membrane 36.94 33.41
CDY57591 Canola endoplasmic reticulum, plasma membrane 36.94 33.41
HORVU0Hr1G012390.2 Barley extracellular, vacuole 31.4 33.06
HORVU5Hr1G049650.2 Barley extracellular, vacuole 31.4 33.06
Bra016475.1-P Field mustard plastid 32.19 32.19
CDY69331 Canola cytosol 21.9 32.17
HORVU3Hr1G087670.3 Barley extracellular 31.13 32.15
CDY71031 Canola cytosol 8.44 32.0
HORVU6Hr1G035230.1 Barley extracellular, golgi, mitochondrion 30.87 31.97
HORVU1Hr1G070790.1 Barley extracellular, plastid 31.4 31.15
HORVU7Hr1G000470.1 Barley cytosol 31.66 28.71
HORVU6Hr1G035210.2 Barley cytosol, peroxisome 30.34 28.47
CDY71376 Canola plastid 36.15 27.96
HORVU3Hr1G001200.2 Barley mitochondrion 29.82 27.43
CDY12974 Canola golgi, mitochondrion 38.52 26.99
CDY54336 Canola extracellular, golgi, plasma membrane 21.37 26.47
AT1G20130.1 Thale cress mitochondrion 35.62 25.28
VIT_18s0001g14770.t01 Wine grape plastid 41.42 25.0
HORVU0Hr1G014960.1 Barley cytosol, mitochondrion 27.97 22.89
CDY44205 Canola plasma membrane 32.98 22.64
PGSC0003DMT400025571 Potato cytosol, plasma membrane, plastid 39.31 21.16
Bra012212.1-P Field mustard plastid 35.09 16.81
CDY29371 Canola plasma membrane 35.62 15.52
CDY67439 Canola plasma membrane 36.41 15.38
Bra025794.1-P Field mustard plasma membrane 35.62 15.17
Protein Annotations
EnsemblPlants:HORVU7Hr1G083530.2EnsemblPlantsGene:HORVU7Hr1G083530Gene3D:3.40.50.1110GO:GO:0003674GO:GO:0003824GO:GO:0016787
GO:GO:0016788InterPro:GDSLInterPro:IPR036514InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_likePANTHER:PTHR22835
PANTHER:PTHR22835:SF242PFAM:PF00657SEG:segSUPFAM:SSF52266TMHMM:TMhelixUniParc:UPI000B4686B0
UniProt:A0A287X4F5MapMan:35.1::::
Description
No Description!
Coordinates
chrchr7H:+:503495517..503500191
Molecular Weight (calculated)
42112.6 Da
IEP (calculated)
6.975
GRAVY (calculated)
-0.135
Length
379 amino acids
Sequence
(BLAST)
001: FICPRMCPIS DRAGGRRDRR RCIQLPRQAM ASLYPGLLLL LMALLSSAHG ATTFRSKISA AFVFGDSIVD PGNNNDRLTE AKANFPPYGQ DFPGGEATGR
101: FSNGKVPGDM LASRLGIKEL LPPYLGNDLP LSELLTGVVF ASGGSGYDPL TSIPATATSS TGQLELFLEY KDRLRALVGE EEMTRVISEG IYFTVMGAND
201: LANNYFAIPL RRHQYDLPSY VKFLVSSAVN FTTKLNEMGA RRIAFLGIPP IGCCPSQREL GSRECEPMRN QAANLFNSEI EKEIRRLDAE QHVQGSKFIY
301: LDIYYNLLDL IQRPSSYGFK EVAEGCCGST VLNAAIFIKN HPACPNAYDY IFWDSFHPTE KAYNIVVDKL FLQNMQYLM
Best Arabidopsis Sequence Match ( AT1G20120.1 )
(BLAST)
001: MLQDRVSGSL SSSKISRCVL FLSLFCFFLL TMHASANRLQ RVPNPGPSPA PEPKPCPSPG PNPAPATTKR THNTTFPAIF AFGDSILDTG NNDYILTLIK
101: ANFLPYGMNF PDKVPTGRFC NGKIPSDFIA DYIGVKPVVP AYLRPGLTQE DLLTGVSFAS GGSGYDPLTP IVVSAIPMSK QLTYFQEYIE KVKGFVGKEK
201: AEHIISKGLA IVVAGSDDLA NTYYGEHLEE FLYDIDTYTS FMASSAASFA MQLYESGAKK IGFIGVSPIG CIPIQRTTRG GLKRKCADEL NFAAQLFNSK
301: LSTSLNELAK TMKNTTLVYI DIYSSFNDMI QNPKKYGFDE IDRGCCGTGL LELGPLCNKY TSLLCKNVSS FMFWDSYHPT ERAYKILSQK FVENDMGPFY
401: DN
Arabidopsis Description
GDSL esterase/lipase At1g20120 [Source:UniProtKB/Swiss-Prot;Acc:P0DKJ6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.