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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 4
  • golgi 4
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, vacuole
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:secretory
iPSORT:mitochondrion
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G164000.1 Wheat extracellular, vacuole 93.48 93.22
TraesCS5B01G161500.1 Wheat extracellular 92.07 91.81
TraesCS5D01G169000.1 Wheat extracellular 91.78 91.53
Zm00001d014487_P001 Maize plastid 71.39 69.23
OQU76903 Sorghum plastid 70.54 68.59
Os09t0132200-01 Rice extracellular 65.44 65.81
EER96404 Sorghum extracellular, vacuole 64.02 62.26
HORVU5Hr1G049650.2 Barley extracellular, vacuole 56.66 55.56
HORVU0Hr1G012390.2 Barley extracellular, vacuole 56.66 55.56
HORVU6Hr1G035230.1 Barley extracellular, golgi, mitochondrion 50.42 48.63
Solyc07g049440.2.1 Tomato extracellular 48.44 48.31
PGSC0003DMT400001826 Potato endoplasmic reticulum, extracellular, vacuole 47.88 47.47
Bra004735.1-P Field mustard extracellular 45.04 47.18
AT4G26790.1 Thale cress extracellular, golgi 46.74 47.01
AT2G42990.1 Thale cress extracellular 45.61 46.0
CDY29250 Canola extracellular 45.61 45.87
Bra026402.1-P Field mustard extracellular 45.61 45.87
KRH46013 Soybean extracellular 45.33 45.71
PGSC0003DMT400001828 Potato extracellular 45.61 45.61
CDX89302 Canola extracellular 45.33 45.58
CDY55498 Canola extracellular, plasma membrane 45.04 45.43
AT2G04570.1 Thale cress extracellular 45.04 45.43
CDY53653 Canola extracellular, plasma membrane 45.04 45.43
PGSC0003DMT400038808 Potato golgi, plasma membrane 45.61 45.22
KRG98969 Soybean extracellular 45.33 45.2
Bra013200.1-P Field mustard extracellular 45.04 45.17
CDX93056 Canola extracellular 45.04 45.17
KRH17906 Soybean endoplasmic reticulum, extracellular 44.48 44.99
CDY15057 Canola extracellular 44.76 44.89
VIT_19s0090g01160.t01 Wine grape extracellular, golgi 43.63 44.77
KRH14825 Soybean nucleus 45.33 44.69
Solyc07g049430.2.1 Tomato extracellular 44.48 44.48
KRH73315 Soybean nucleus 45.04 44.41
Solyc05g043330.2.1 Tomato plasma membrane 44.76 44.26
HORVU7Hr1G092040.2 Barley golgi 45.89 43.9
KRH14826 Soybean endoplasmic reticulum, extracellular 42.21 43.06
PGSC0003DMT400038810 Potato extracellular 43.06 42.94
KRH73314 Soybean endoplasmic reticulum, extracellular 42.21 42.57
HORVU6Hr1G035210.2 Barley cytosol, peroxisome 45.04 39.36
Solyc05g043320.1.1 Tomato cytosol 24.93 38.6
HORVU3Hr1G001200.2 Barley mitochondrion 43.63 37.38
HORVU1Hr1G036440.1 Barley endoplasmic reticulum, extracellular, plastid 38.53 36.56
HORVU5Hr1G125000.1 Barley vacuole 38.24 36.39
HORVU6Hr1G001510.1 Barley endoplasmic reticulum, vacuole 39.09 35.84
HORVU3Hr1G087670.3 Barley extracellular 36.83 35.42
HORVU7Hr1G083440.4 Barley extracellular 35.41 35.21
HORVU1Hr1G070790.1 Barley extracellular, plastid 37.68 34.82
HORVU3Hr1G088120.3 Barley cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 37.11 34.66
HORVU2Hr1G107400.3 Barley mitochondrion 21.81 34.53
HORVU7Hr1G083530.2 Barley golgi 36.54 34.04
HORVU5Hr1G124980.2 Barley plastid 37.68 32.52
HORVU2Hr1G068430.1 Barley endoplasmic reticulum, mitochondrion, plasma membrane 33.71 31.48
HORVU6Hr1G018750.1 Barley endoplasmic reticulum, plasma membrane 33.43 30.33
HORVU7Hr1G000470.1 Barley cytosol 33.99 28.71
VIT_12s0059g01590.t01 Wine grape extracellular 46.74 25.08
HORVU0Hr1G014960.1 Barley cytosol, mitochondrion 32.86 25.05
Protein Annotations
EnsemblPlants:HORVU0Hr1G012230.2EnsemblPlantsGene:HORVU0Hr1G012230Gene3D:3.40.50.1110GO:GO:0003674GO:GO:0003824GO:GO:0016787
GO:GO:0016788InterPro:GDSLInterPro:IPR036514InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_likencoils:Coil
PANTHER:PTHR22835PANTHER:PTHR22835:SF269PFAM:PF00657SignalP:SignalP-noTMSUPFAM:SSF52266UniParc:UPI00029648B8
UniProt:M0XAX6MapMan:35.1::::
Description
No Description!
Coordinates
chrchrUn:+:69863021..69870254
Molecular Weight (calculated)
38143.3 Da
IEP (calculated)
4.448
GRAVY (calculated)
0.074
Length
353 amino acids
Sequence
(BLAST)
001: MSSQVVRYWP LILVHLLLSS GSGATAGKVP AIIVFGDSTV DPGNNDYIPT VARGNFPPYG RDFDGGVATG RFTNGRLVTD FMSEALGLAT SVPAYLDGSY
101: TVDQLAGGVS FASGGTGLDT LTAKIASVIS ISQQLDYFKE YKERLTKAKG QAVADEIIAE ALYIFSIGTN DFFVNYYVMP LRPAQYTPTE YATYLVGLAE
201: DAVRQAYELG ARKVMLSGIP PFGCVPAART MNWEAPGECN EEYNRVALRY NAGIRDAVGR LGAELTGARV VYLDVYDVPS AIFANPSAYG FENVAQGCCG
301: TGLIETTVLC GMDEAFTCQD ADKYVFFDSV HPSQRTYKLL ADEMIKTTLQ VFL
Best Arabidopsis Sequence Match ( AT5G42170.1 )
(BLAST)
001: MSRLVYVIFL LVVVEGSRNT LERNTETNAT EAKVEGKGTI KLPPNVTIPG IITFGDSIVD SGNNNHLRTA LKCNFPPYGK DFPGKIATGR FSDGRVPSDI
101: VAERLGIAET IPAYLNPKLK NEDLLKGVNF ASGGSGYDPL TAKLVKVVSL SDQLKNFQEY KNKLKVIVGE EKANFLVKNS LYLVVASSND IAHTYTARSI
201: KYNKTSYADY LADSASKFVS ALYGLGARRI GVFSAVPVGC VPAARTLRGK LKRRCSEKLN EVARNFNAKI SPTLEALGKE LPDSRVVLID VCDTLNDMIE
301: NPKNYGFEVS NRGCCGTGLV EVLFLCNKIN PFTCKNSSSY IFWDSYHPTE KAYQIIVDKL LGNYITKLV
Arabidopsis Description
GDSL esterase/lipase At5g42170 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHW9]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.