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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 3
  • vacuole 4
  • plasma membrane 3
  • golgi 3
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, vacuole
Any Predictor:plastid, secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU0Hr1G012390.2 Barley extracellular, vacuole 100.0 100.0
TraesCS5D01G169100.1 Wheat extracellular, golgi 93.89 94.41
TraesCS5A01G164200.1 Wheat extracellular 93.61 94.4
TraesCS5B01G161700.1 Wheat golgi 93.33 93.59
Os09t0132900-02 Rice extracellular 78.33 80.11
Zm00001d019855_P001 Maize extracellular, golgi 76.39 78.12
EES16382 Sorghum extracellular, golgi 78.06 76.99
HORVU0Hr1G012230.2 Barley extracellular, vacuole 55.56 56.66
KRH46013 Soybean extracellular 52.22 53.71
HORVU6Hr1G035230.1 Barley extracellular, golgi, mitochondrion 53.33 52.46
Solyc07g049440.2.1 Tomato extracellular 51.39 52.26
Bra004735.1-P Field mustard extracellular 48.89 52.23
PGSC0003DMT400001826 Potato endoplasmic reticulum, extracellular, vacuole 51.39 51.97
VIT_19s0090g01160.t01 Wine grape extracellular, golgi 49.44 51.74
KRG98969 Soybean extracellular 50.83 51.69
KRH14826 Soybean endoplasmic reticulum, extracellular 48.89 50.87
AT2G42990.1 Thale cress extracellular 49.44 50.86
CDY53653 Canola extracellular, plasma membrane 49.44 50.86
CDY55498 Canola extracellular, plasma membrane 49.44 50.86
AT2G04570.1 Thale cress extracellular 49.17 50.57
KRH14825 Soybean nucleus 50.28 50.56
KRH17906 Soybean endoplasmic reticulum, extracellular 48.61 50.14
Solyc07g049430.2.1 Tomato extracellular 49.17 50.14
Bra026402.1-P Field mustard extracellular 48.61 49.86
KRH73315 Soybean nucleus 49.44 49.72
KRH73314 Soybean endoplasmic reticulum, extracellular 48.33 49.71
PGSC0003DMT400001828 Potato extracellular 48.33 49.29
CDY29250 Canola extracellular 48.06 49.29
CDX89302 Canola extracellular 48.06 49.29
CDX93056 Canola extracellular 47.78 48.86
Bra013200.1-P Field mustard extracellular 47.78 48.86
AT4G26790.1 Thale cress extracellular, golgi 47.5 48.72
CDY15057 Canola extracellular 47.5 48.58
PGSC0003DMT400038808 Potato golgi, plasma membrane 47.5 48.03
Solyc05g043330.2.1 Tomato plasma membrane 46.94 47.34
PGSC0003DMT400038810 Potato extracellular 45.28 46.05
HORVU7Hr1G092040.2 Barley golgi 45.0 43.9
HORVU6Hr1G035210.2 Barley cytosol, peroxisome 48.06 42.82
Solyc05g043320.1.1 Tomato cytosol 26.39 41.67
HORVU3Hr1G001200.2 Barley mitochondrion 45.0 39.32
HORVU3Hr1G087670.3 Barley extracellular 36.39 35.69
HORVU1Hr1G036440.1 Barley endoplasmic reticulum, extracellular, plastid 36.39 35.22
HORVU6Hr1G001510.1 Barley endoplasmic reticulum, vacuole 37.22 34.81
HORVU3Hr1G088120.3 Barley cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 36.39 34.66
HORVU1Hr1G070790.1 Barley extracellular, plastid 35.28 33.25
HORVU2Hr1G107400.3 Barley mitochondrion 20.56 33.18
HORVU2Hr1G068430.1 Barley endoplasmic reticulum, mitochondrion, plasma membrane 34.17 32.54
HORVU5Hr1G125000.1 Barley vacuole 33.33 32.34
HORVU6Hr1G018750.1 Barley endoplasmic reticulum, plasma membrane 34.72 32.13
HORVU7Hr1G083440.4 Barley extracellular 31.67 32.11
HORVU7Hr1G083530.2 Barley golgi 33.06 31.4
HORVU5Hr1G124980.2 Barley plastid 34.17 30.07
HORVU7Hr1G000470.1 Barley cytosol 34.44 29.67
VIT_12s0059g01590.t01 Wine grape extracellular 50.0 27.36
HORVU0Hr1G014960.1 Barley cytosol, mitochondrion 32.22 25.05
Protein Annotations
EMBL:AK376689EnsemblPlants:HORVU5Hr1G049650.2EnsemblPlantsGene:HORVU5Hr1G049650Gene3D:3.40.50.1110GO:GO:0003674GO:GO:0003824
GO:GO:0016787GO:GO:0016788InterPro:GDSLInterPro:IPR036514InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_like
ncoils:CoilPANTHER:PTHR22835PANTHER:PTHR22835:SF269PFAM:PF00657SEG:segSignalP:SignalP-noTM
SUPFAM:SSF52266TMHMM:TMhelixUniParc:UPI0002009101UniProt:F2EKL2MapMan:35.1:
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2EKL2]
Coordinates
chrchr5H:-:385202113..385204187
Molecular Weight (calculated)
39096.6 Da
IEP (calculated)
5.409
GRAVY (calculated)
-0.043
Length
360 amino acids
Sequence
(BLAST)
001: MSSLHRYLPC LILLVLGGGG GGGGGPTAVA AAGKVPAIIV FGDSSVDTGN NNFIPTIARS NFWPYGRDFA DGHPTGRFSN GRLATDFISE AFGLPASIPA
101: YLDTTLTIDD LAAGVSFASA STGLDNATAG ILSVITMAEQ LDYFKEYKQR LKLAKGDARG EEIIREALYI WSIGTNDFIE NYYNLPERRM QYTAAEYQAY
201: LLGLAEASIR AVHALGGRKM DFTGLTPMGC LPAERMGNRG DPGQCNEEYN AVARSFNTKL QQAVVPKLNK ELPGLHLVYA DTYDVLDVVV RKPADYGFEN
301: AERGCCGTGM FEAGYFCSLS TSLLCRNANK YVFFDAIHPT ERMYSILADK VMNTTLHVFL
Best Arabidopsis Sequence Match ( AT2G04570.1 )
(BLAST)
001: MGHLKSLFTI LFLIAMSSTV TFAGKIPAII VFGDSSVDAG NNNYIPTVAR SNFEPYGRDF VGGKPTGRFC NGKIATDFMS EALGLKPIIP AYLDPSYNIS
101: DFATGVTFAS AATGYDNATS DVLSVLPLWK QLEYYKEYQT KLKAYQGKDR GTETIESSLY LISIGTNDFL ENYFAFPGRS SQYSVSLYQD FLAGIAKEFV
201: KKLHGLGARK ISLGGLPPMG CMPLERATNI GTGGECVGRY NDIAVQFNSK LDKMVEKLSK ELPGSNLVFS NPYEPFMRII KNPSSFGFEV VGAACCATGM
301: FEMGYGCQRN NPFTCTNADK YVFWDSFHPT QKTNHIMANA LMNSTFPHFL
Arabidopsis Description
GDSL esterase/lipase At2g04570 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJB4]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.