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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 3
  • vacuole 2
  • plasma membrane 3
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
TargetP:secretory
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU1Hr1G076010.1
HORVU3Hr1G026980.2
HORVU3Hr1G071060.1
HORVU7Hr1G003870.3
HORVU7Hr1G003880.2
HORVU7Hr1G088900.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G75880.1 HORVU1Hr1G076010.1 AT3G16310.1 21798944
AT1G75880.1 HORVU3Hr1G026980.2 AT3G16310.1 21798944
AT1G75880.1 HORVU3Hr1G071060.1 AT3G16310.1 21798944
AT1G75880.1 HORVU7Hr1G088900.1 AT4G19030.1 21798944
AT1G75880.1 HORVU7Hr1G003870.3 AT5G24290.1 21798944
AT1G75880.1 HORVU7Hr1G003880.2 AT5G24290.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G104300.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 84.83 88.24
TraesCS6B01G133500.1 Wheat extracellular 81.75 87.6
TraesCS6D01G093000.1 Wheat extracellular, plasma membrane 82.01 87.16
HORVU2Hr1G068430.1 Barley endoplasmic reticulum, mitochondrion, plasma membrane 60.93 62.7
Os10t0140300-01 Rice plasma membrane 54.24 60.46
GSMUA_Achr4P25720_001 Banana vacuole 39.85 42.82
KRH17463 Soybean endoplasmic reticulum, golgi 38.82 41.6
Solyc04g081770.2.1 Tomato cytosol 35.99 41.06
PGSC0003DMT400025569 Potato extracellular 37.02 40.79
KRH05980 Soybean endoplasmic reticulum, golgi 37.79 40.5
KRH51682 Soybean extracellular, golgi 37.79 40.38
KRH17461 Soybean nucleus 38.05 40.22
VIT_18s0001g14810.t01 Wine grape cytosol 35.48 39.88
Bra015802.1-P Field mustard extracellular 37.02 39.78
CDX87651 Canola extracellular 37.02 39.78
CDY36116 Canola extracellular, plasma membrane 32.39 39.5
KRH61020 Soybean endoplasmic reticulum, golgi, plastid 36.76 39.29
VIT_18s0001g14790.t01 Wine grape endoplasmic reticulum, golgi 36.25 39.28
CDY20086 Canola extracellular, plasma membrane 35.22 39.26
KRH05977 Soybean nucleus 37.53 39.25
Bra003736.1-P Field mustard extracellular, plasma membrane 36.5 39.23
CDX73211 Canola extracellular 36.5 39.23
PGSC0003DMT400025568 Potato extracellular 35.22 39.14
Solyc04g081790.2.1 Tomato extracellular, plasma membrane 35.22 39.14
Solyc06g048670.2.1 Tomato extracellular 35.48 39.09
CDX68113 Canola endoplasmic reticulum, plasma membrane 36.25 38.95
CDX85929 Canola endoplasmic reticulum, plasma membrane 36.25 38.95
CDY51993 Canola plasma membrane 31.88 38.87
Solyc12g089350.1.1 Tomato extracellular, golgi 34.45 38.84
KRH05976 Soybean nucleus 37.02 38.71
KRH61019 Soybean extracellular, plasma membrane 35.48 38.66
PGSC0003DMT400075642 Potato extracellular 35.73 38.61
HORVU7Hr1G083440.4 Barley extracellular 35.22 38.59
Solyc04g081760.2.1 Tomato extracellular 26.22 38.49
CDY32339 Canola extracellular, plasma membrane 34.7 38.46
KRH69760 Soybean extracellular 35.73 38.4
Bra010987.1-P Field mustard plasma membrane 34.19 38.22
CDY42062 Canola cytosol 28.28 38.19
Solyc04g081800.1.1 Tomato extracellular, plasma membrane 34.96 37.99
KRH17460 Soybean nucleus 35.22 37.85
KRH51681 Soybean extracellular, plasma membrane 34.7 37.82
VIT_18s0001g14800.t01 Wine grape extracellular, golgi 35.22 37.64
HORVU1Hr1G036440.1 Barley endoplasmic reticulum, extracellular, plastid 35.99 37.63
VIT_18s0001g14760.t01 Wine grape extracellular 26.99 37.63
AT3G14820.1 Thale cress extracellular, plasma membrane 33.93 37.61
KRH17462 Soybean extracellular, plasma membrane, plastid 35.48 37.6
PGSC0003DMT400070969 Potato extracellular 20.57 37.38
Solyc04g081780.2.1 Tomato extracellular 32.9 37.32
CDY64565 Canola extracellular 30.59 37.19
AT1G58525.1 Thale cress extracellular 32.65 37.13
CDY48852 Canola extracellular 31.11 37.12
AT1G20120.1 Thale cress plasma membrane 38.3 37.06
Bra027858.1-P Field mustard extracellular 33.16 36.96
CDY09420 Canola extracellular 30.33 36.88
Bra027859.1-P Field mustard extracellular 32.9 36.68
CDY65553 Canola extracellular 31.11 36.67
KRH05978 Soybean plastid 35.48 36.6
CDY41727 Canola extracellular 30.59 36.5
HORVU7Hr1G083530.2 Barley golgi 35.48 36.41
Bra026636.1-P Field mustard extracellular 32.65 36.39
CDX87653 Canola cytosol 28.53 36.27
AT1G75900.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 33.93 36.26
CDY53577 Canola extracellular 30.33 36.2
AT3G43550.1 Thale cress extracellular 26.74 36.11
CDY71031 Canola cytosol 9.25 36.0
Bra015804.1-P Field mustard cytosol 28.28 35.95
AT3G43570.1 Thale cress extracellular 29.56 35.94
CDY41728 Canola extracellular 30.08 35.89
HORVU6Hr1G001510.1 Barley endoplasmic reticulum, vacuole 35.48 35.84
Bra015803.1-P Field mustard cytosol 31.88 35.84
AT1G58725.1 Thale cress extracellular 32.13 35.82
AT1G59030.1 Thale cress extracellular, plasma membrane 32.13 35.82
AT1G59406.1 Thale cress extracellular 32.13 35.82
AT5G42170.1 Thale cress extracellular 33.93 35.77
KRH55990 Soybean extracellular, plasma membrane, vacuole 33.42 35.62
CDY53562 Canola extracellular 22.62 35.48
KRH55993 Soybean extracellular 32.9 35.36
KRH51683 Soybean plasma membrane 25.96 35.31
Bra027951.1-P Field mustard extracellular 31.62 35.24
CDY53576 Canola extracellular 30.33 35.22
Bra027950.1-P Field mustard extracellular 31.62 35.14
KRH55991 Soybean extracellular 32.65 35.08
KRH28831 Soybean plasma membrane 32.9 34.97
Bra012211.1-P Field mustard endoplasmic reticulum, plasma membrane 37.53 34.84
CDY57591 Canola endoplasmic reticulum, plasma membrane 37.53 34.84
VIT_18s0001g14780.t01 Wine grape plasma membrane 30.08 34.82
HORVU0Hr1G012390.2 Barley extracellular, vacuole 32.13 34.72
HORVU5Hr1G049650.2 Barley extracellular, vacuole 32.13 34.72
CDX87652 Canola golgi, plasma membrane 32.39 34.71
Zm00001d014308_P001 Maize endoplasmic reticulum 58.1 34.61
HORVU6Hr1G035230.1 Barley extracellular, golgi, mitochondrion 32.39 34.43
KRH08025 Soybean extracellular, vacuole 32.39 34.43
KRH69753 Soybean extracellular, plasma membrane, vacuole 32.13 34.25
CDX73210 Canola golgi, mitochondrion, plasma membrane 32.39 34.15
Bra003737.1-P Field mustard cytosol, plastid 28.02 33.85
CDY44206 Canola plasma membrane 33.16 33.77
AT1G75880.1 Thale cress golgi, plasma membrane 32.39 33.6
HORVU0Hr1G012230.2 Barley extracellular, vacuole 30.33 33.43
HORVU5Hr1G125000.1 Barley vacuole 31.88 33.42
AT1G20132.1 Thale cress extracellular, vacuole 32.65 33.16
CDX85928 Canola plasma membrane 31.88 33.16
CDY70534 Canola plasma membrane 31.88 33.16
Bra035295.1-P Field mustard mitochondrion 24.42 32.99
CDY69331 Canola cytosol 21.85 32.95
CDY02386 Canola golgi 33.16 32.91
Bra016475.1-P Field mustard plastid 31.62 32.45
HORVU3Hr1G087670.3 Barley extracellular 30.33 32.15
KRH08023 Soybean extracellular 23.91 31.85
HORVU7Hr1G092040.2 Barley golgi 30.08 31.71
AT1G75890.3 Thale cress plastid 32.13 31.65
HORVU2Hr1G107400.3 Barley mitochondrion 17.99 31.39
KXG38704 Sorghum endoplasmic reticulum, plasma membrane 60.67 31.38
HORVU3Hr1G088120.3 Barley cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 30.08 30.95
HORVU1Hr1G070790.1 Barley extracellular, plastid 29.82 30.37
CDY54336 Canola extracellular, golgi, plasma membrane 22.88 29.09
HORVU7Hr1G000470.1 Barley cytosol 30.85 28.71
HORVU5Hr1G124980.2 Barley plastid 30.08 28.61
CDY71376 Canola plastid 34.96 27.76
AT1G20130.1 Thale cress mitochondrion 38.05 27.72
HORVU6Hr1G035210.2 Barley cytosol, peroxisome 28.53 27.48
HORVU3Hr1G001200.2 Barley mitochondrion 25.96 24.51
CDY44205 Canola plasma membrane 33.42 23.55
CDY12974 Canola golgi, mitochondrion 32.65 23.48
HORVU0Hr1G014960.1 Barley cytosol, mitochondrion 27.76 23.33
VIT_18s0001g14770.t01 Wine grape plastid 33.93 21.02
PGSC0003DMT400025571 Potato cytosol, plasma membrane, plastid 31.62 17.47
Bra012212.1-P Field mustard plastid 33.16 16.31
CDY29371 Canola plasma membrane 36.25 16.21
Bra025794.1-P Field mustard plasma membrane 36.25 15.84
CDY67439 Canola plasma membrane 36.25 15.72
Protein Annotations
Gene3D:3.40.50.1110MapMan:35.1UniProt:A0A287THM0InterPro:GDSLGO:GO:0003674GO:GO:0003824
GO:GO:0006629GO:GO:0008150GO:GO:0008152GO:GO:0016298GO:GO:0016787GO:GO:0016788
EnsemblPlantsGene:HORVU6Hr1G018750EnsemblPlants:HORVU6Hr1G018750.1InterPro:IPR036514InterPro:Lipase_GDSL_ASPFAM:PF00657ScanProsite:PS01098
PANTHER:PTHR22835PANTHER:PTHR22835:SF217InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_likeSUPFAM:SSF52266SignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI000B47EE3ESEG:seg:::
Description
No Description!
Coordinates
chrchr6H:-:48214205..48215576
Molecular Weight (calculated)
41324.2 Da
IEP (calculated)
8.376
GRAVY (calculated)
0.080
Length
389 amino acids
Sequence
(BLAST)
001: QTLSVTHMAL ATVSGVISAL LVILAGVAAT AQPPPAVGGP PPVPSPVPAT PPPAGGATPP PAVGPPKPPP LPAGPPKFPA LLAFGDSVAD TGNNNHIRTF
101: IRANFPPYGK NFPGHKPTGR FCDGKVSVDL LASALGVKEL VPPYLKRDLS IEELKTGVTF ASAGNGYDNA TCRTMSALTM ERQLQLFEEY KQKVGGTIPD
201: KALYIVVTGS NDIVEHFTFA DGITEPRYAE IMVERAIAFV QSLADLGAKR IALVGAPPVG CLPSQRMIAG GLKKQCATDR NQLALLFNHR VGQEMAKLGA
301: RLPGVTLVNI DLYTIFADVV HRPEAYGLKN THDACCGYIG LAAAVLCNFA SPLCKEPSSY LFWDSYHPTE NGYKILIDAI VAKYFRFMH
Best Arabidopsis Sequence Match ( AT1G06990.1 )
(BLAST)
001: MLIHVIIFMI ITTMQFSTTC HAYVINVTNV NVSMFPAILV FGDSTIDTGN NNYIKTYIRA NFPPYGCNFP GHNATGRFSN GKLIPDFIAS LMGIKDTVPP
101: FLDPHLSDSD IITGVCFASA GSGYDNLTDR ATSTLSVDKQ ADMLRSYVER LSQIVGDEKA ASIVSEALVI VSSGTNDFNL NLYDTPSRRQ KLGVDGYQSF
201: ILSNVHNFVQ ELYDIGCRKI MVLGLPPVGC LPIQMTMAMQ KQNERRCIDK QNSDSQEFNQ KLKNSLTEMQ SNLTGSVIFY GDIYGALFDM ATNPQRYGLK
301: ETTRGCCGTG EIELAYLCNA LTRICPNPNQ YLFWDDIHPS QIAYIVISLS LVEQIFHVLS
Arabidopsis Description
GDSL esterase/lipase At1g06990 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMJ3]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.