Skip to main content
crop-pal logo
Barley
Search for another protein from :
Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • plastid 1
  • extracellular 5
  • endoplasmic reticulum 3
  • vacuole 4
  • plasma membrane 3
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:vacuole
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU1Hr1G076010.1
HORVU3Hr1G026980.2
HORVU3Hr1G071060.1
HORVU7Hr1G003870.3
HORVU7Hr1G003880.2
HORVU7Hr1G088900.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G75880.1 HORVU1Hr1G076010.1 AT3G16310.1 21798944
AT1G75880.1 HORVU3Hr1G026980.2 AT3G16310.1 21798944
AT1G75880.1 HORVU3Hr1G071060.1 AT3G16310.1 21798944
AT1G75880.1 HORVU7Hr1G088900.1 AT4G19030.1 21798944
AT1G75880.1 HORVU7Hr1G003870.3 AT5G24290.1 21798944
AT1G75880.1 HORVU7Hr1G003880.2 AT5G24290.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7B01G250700.1 Wheat extracellular, vacuole 91.27 91.78
TraesCS7D01G346700.1 Wheat extracellular 91.55 91.55
TraesCS7A01G339300.1 Wheat cytosol 56.34 73.26
HORVU7Hr1G083530.2 Barley golgi 75.21 70.45
Os06t0351500-01 Rice endoplasmic reticulum, golgi, mitochondrion, plastid 62.25 58.47
Solyc04g081790.2.1 Tomato extracellular, plasma membrane 44.79 45.43
KRH17461 Soybean nucleus 45.35 43.75
VIT_18s0001g14810.t01 Wine grape cytosol 42.54 43.64
VIT_18s0001g14790.t01 Wine grape endoplasmic reticulum, golgi 43.94 43.45
KRH55991 Soybean extracellular 43.94 43.09
KRH28831 Soybean plasma membrane 44.23 42.9
KRH55993 Soybean extracellular 43.66 42.82
CDX87653 Canola cytosol 36.9 42.81
VIT_18s0001g14760.t01 Wine grape extracellular 33.52 42.65
Bra015804.1-P Field mustard cytosol 36.62 42.48
KRH05977 Soybean nucleus 44.51 42.47
KRH55990 Soybean extracellular, plasma membrane, vacuole 43.66 42.47
KRH17460 Soybean nucleus 43.1 42.27
KRH17462 Soybean extracellular, plasma membrane, plastid 43.66 42.23
KRH17463 Soybean endoplasmic reticulum, golgi 42.82 41.87
PGSC0003DMT400070969 Potato extracellular 25.07 41.59
KRH51682 Soybean extracellular, golgi 42.54 41.48
KRH69753 Soybean extracellular, plasma membrane, vacuole 42.54 41.37
Solyc04g081770.2.1 Tomato cytosol 39.72 41.35
KRH05980 Soybean endoplasmic reticulum, golgi 42.25 41.32
VIT_18s0001g14800.t01 Wine grape extracellular, golgi 42.25 41.21
KRH05976 Soybean nucleus 43.1 41.13
KRH05978 Soybean plastid 43.66 41.11
Bra015803.1-P Field mustard cytosol 40.0 41.04
KRH61020 Soybean endoplasmic reticulum, golgi, plastid 41.97 40.93
KRH51683 Soybean plasma membrane 32.96 40.91
Solyc04g081800.1.1 Tomato extracellular, plasma membrane 41.13 40.78
Solyc12g089350.1.1 Tomato extracellular, golgi 39.15 40.29
PGSC0003DMT400025569 Potato extracellular 40.0 40.23
VIT_18s0001g14780.t01 Wine grape plasma membrane 38.03 40.18
KRH08025 Soybean extracellular, vacuole 41.41 40.16
CDY36116 Canola extracellular, plasma membrane 36.06 40.13
CDY51993 Canola plasma membrane 36.06 40.13
KRH61019 Soybean extracellular, plasma membrane 40.28 40.06
PGSC0003DMT400025568 Potato extracellular 39.44 40.0
Solyc06g048670.2.1 Tomato extracellular 39.72 39.94
KRH51681 Soybean extracellular, plasma membrane 40.0 39.78
CDY09420 Canola extracellular 35.77 39.69
CDY64565 Canola extracellular 35.77 39.69
CDX87652 Canola golgi, plasma membrane 40.56 39.67
Bra010987.1-P Field mustard plasma membrane 38.87 39.66
Solyc04g081780.2.1 Tomato extracellular 38.31 39.65
CDY42062 Canola cytosol 32.11 39.58
Bra003736.1-P Field mustard extracellular, plasma membrane 40.28 39.5
CDX85929 Canola endoplasmic reticulum, plasma membrane 40.28 39.5
Bra003737.1-P Field mustard cytosol, plastid 35.77 39.44
HORVU5Hr1G125000.1 Barley vacuole 41.13 39.35
CDY41727 Canola extracellular 36.06 39.26
Solyc04g081760.2.1 Tomato extracellular 29.3 39.25
AT3G43550.1 Thale cress extracellular 31.83 39.24
CDX68113 Canola endoplasmic reticulum, plasma membrane 40.0 39.23
AT1G75880.1 Thale cress golgi, plasma membrane 41.41 39.2
PGSC0003DMT400075642 Potato extracellular 39.72 39.17
AT3G43570.1 Thale cress extracellular 35.21 39.06
CDX73210 Canola golgi, mitochondrion, plasma membrane 40.56 39.02
HORVU1Hr1G036440.1 Barley endoplasmic reticulum, extracellular, plastid 40.85 38.98
CDY53577 Canola extracellular 35.77 38.96
AT1G58525.1 Thale cress extracellular 37.46 38.89
AT1G58725.1 Thale cress extracellular 38.03 38.68
AT1G59030.1 Thale cress extracellular, plasma membrane 38.03 38.68
AT1G59406.1 Thale cress extracellular 38.03 38.68
Bra026636.1-P Field mustard extracellular 38.03 38.68
Bra015802.1-P Field mustard extracellular 39.44 38.67
CDX87651 Canola extracellular 39.44 38.67
KRH69760 Soybean extracellular 39.44 38.67
CDY41728 Canola extracellular 35.49 38.65
CDX85928 Canola plasma membrane 40.28 38.24
CDY70534 Canola plasma membrane 40.28 38.24
CDY48852 Canola extracellular 34.93 38.04
CDY65553 Canola extracellular 35.21 37.88
CDX73211 Canola extracellular 38.59 37.85
Bra027951.1-P Field mustard extracellular 37.18 37.82
AT5G42170.1 Thale cress extracellular 39.15 37.67
CDY53576 Canola extracellular 35.21 37.31
Bra027858.1-P Field mustard extracellular 36.62 37.25
Bra027859.1-P Field mustard extracellular 36.62 37.25
HORVU2Hr1G107400.3 Barley mitochondrion 23.38 37.22
Bra027950.1-P Field mustard extracellular 36.62 37.14
HORVU6Hr1G001510.1 Barley endoplasmic reticulum, vacuole 40.28 37.14
CDY53562 Canola extracellular 25.92 37.1
AT3G14820.1 Thale cress extracellular, plasma membrane 36.62 37.04
CDY20086 Canola extracellular, plasma membrane 36.06 36.68
AT1G75900.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 37.46 36.54
CDY32339 Canola extracellular, plasma membrane 36.06 36.47
KRH08023 Soybean extracellular 29.58 35.96
HORVU0Hr1G012230.2 Barley extracellular, vacuole 35.21 35.41
HORVU6Hr1G018750.1 Barley endoplasmic reticulum, plasma membrane 38.59 35.22
HORVU2Hr1G068430.1 Barley endoplasmic reticulum, mitochondrion, plasma membrane 37.46 35.19
AT1G75890.3 Thale cress plastid 38.87 34.94
AT1G20120.1 Thale cress plasma membrane 39.15 34.58
HORVU5Hr1G124980.2 Barley plastid 39.72 34.47
HORVU3Hr1G088120.3 Barley cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 36.06 33.86
CDY02386 Canola golgi 36.9 33.42
Bra035295.1-P Field mustard mitochondrion 27.04 33.33
CDY44206 Canola plasma membrane 35.49 32.98
HORVU3Hr1G087670.3 Barley extracellular 34.08 32.97
AT1G20132.1 Thale cress extracellular, vacuole 35.21 32.64
Bra012211.1-P Field mustard endoplasmic reticulum, plasma membrane 38.03 32.22
CDY57591 Canola endoplasmic reticulum, plasma membrane 38.03 32.22
HORVU6Hr1G035230.1 Barley extracellular, golgi, mitochondrion 32.96 31.97
HORVU0Hr1G012390.2 Barley extracellular, vacuole 32.11 31.67
HORVU5Hr1G049650.2 Barley extracellular, vacuole 32.11 31.67
Bra016475.1-P Field mustard plastid 33.24 31.13
HORVU7Hr1G092040.2 Barley golgi 32.11 30.89
HORVU1Hr1G070790.1 Barley extracellular, plastid 33.24 30.89
CDY69331 Canola cytosol 22.25 30.62
CDY71031 Canola cytosol 8.17 29.0
HORVU7Hr1G000470.1 Barley cytosol 32.96 27.99
CDY71376 Canola plastid 38.31 27.76
HORVU6Hr1G035210.2 Barley cytosol, peroxisome 30.42 26.73
HORVU3Hr1G001200.2 Barley mitochondrion 29.58 25.49
AT1G20130.1 Thale cress mitochondrion 38.31 25.47
CDY54336 Canola extracellular, golgi, plasma membrane 21.41 24.84
CDY12974 Canola golgi, mitochondrion 36.34 23.84
HORVU0Hr1G014960.1 Barley cytosol, mitochondrion 30.42 23.33
VIT_18s0001g14770.t01 Wine grape plastid 41.13 23.25
CDY44205 Canola plasma membrane 35.49 22.83
PGSC0003DMT400025571 Potato cytosol, plasma membrane, plastid 40.56 20.45
Bra012212.1-P Field mustard plastid 37.18 16.69
CDY29371 Canola plasma membrane 37.75 15.4
CDY67439 Canola plasma membrane 38.59 15.27
Bra025794.1-P Field mustard plasma membrane 37.75 15.06
Protein Annotations
EnsemblPlants:HORVU7Hr1G083440.4EnsemblPlantsGene:HORVU7Hr1G083440Gene3D:3.40.50.1110GO:GO:0003674GO:GO:0003824GO:GO:0016787
GO:GO:0016788InterPro:GDSLInterPro:IPR036514InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_likePANTHER:PTHR22835
PANTHER:PTHR22835:SF242PFAM:PF00657SEG:segSignalP:SignalP-noTMSUPFAM:SSF52266TMHMM:TMhelix
UniParc:UPI000B4620BBUniProt:A0A287X4F1MapMan:35.1:::
Description
No Description!
Coordinates
chrchr7H:+:503321894..503338822
Molecular Weight (calculated)
39013.5 Da
IEP (calculated)
4.936
GRAVY (calculated)
-0.018
Length
355 amino acids
Sequence
(BLAST)
001: MPGHALLLVG SVLLVVLAPL SCADAAVGTG KSKISAVFMF GDSLVDPGNN NNRLTEARAN FPPYGQDFPG GKATGRFSNG RVPGDMLASK LGVKEFLPPY
101: IGDDLELSEL LTGVAFASGG SGYDPLTSIP AIATSSTGQL ELFLEYKEKL ISLVGEEEAS RVISRGIYFT AMGANDIANN YFSIPLRRHQ YDLPSYVKFL
201: ISSAVNFTIK LNDIGAKRIG FFGIPPIGCC PSQRKHGSRE CDALQNQAAE LFNSGIEKEI ERLNVERSVN DSRFVYLDIY YNLLDLVQQH DFYGFKEVTE
301: GCCGSTVLNA AVFIQYHPPC PNACDYIFWD SFHCTEKAYN IVIDEIFQQN MHYLM
Best Arabidopsis Sequence Match ( AT1G20120.1 )
(BLAST)
001: MLQDRVSGSL SSSKISRCVL FLSLFCFFLL TMHASANRLQ RVPNPGPSPA PEPKPCPSPG PNPAPATTKR THNTTFPAIF AFGDSILDTG NNDYILTLIK
101: ANFLPYGMNF PDKVPTGRFC NGKIPSDFIA DYIGVKPVVP AYLRPGLTQE DLLTGVSFAS GGSGYDPLTP IVVSAIPMSK QLTYFQEYIE KVKGFVGKEK
201: AEHIISKGLA IVVAGSDDLA NTYYGEHLEE FLYDIDTYTS FMASSAASFA MQLYESGAKK IGFIGVSPIG CIPIQRTTRG GLKRKCADEL NFAAQLFNSK
301: LSTSLNELAK TMKNTTLVYI DIYSSFNDMI QNPKKYGFDE IDRGCCGTGL LELGPLCNKY TSLLCKNVSS FMFWDSYHPT ERAYKILSQK FVENDMGPFY
401: DN
Arabidopsis Description
GDSL esterase/lipase At1g20120 [Source:UniProtKB/Swiss-Prot;Acc:P0DKJ6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.