Factsheet for PGSC0003DMT400075642

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400001535
PGSC0003DMT400006495
PGSC0003DMT400071510
PGSC0003DMT400071835
PGSC0003DMT400073246

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G75880.1	PGSC0003DMT400006495	AT3G16310.1	21798944
AT1G75880.1	PGSC0003DMT400071510	AT4G19030.1	21798944
AT1G75880.1	PGSC0003DMT400073246	AT4G19030.1	21798944
AT1G75880.1	PGSC0003DMT400001535	AT5G24290.1	21798944
AT1G75880.1	PGSC0003DMT400071835	AT5G24290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g089350.1.1	Tomato	extracellular, golgi	89.72	93.62
PGSC0003DMT400025568	Potato	extracellular	68.89	70.86
PGSC0003DMT400025569	Potato	extracellular	69.44	70.82
PGSC0003DMT400070969	Potato	extracellular	35.28	59.35
VIT_18s0001g14810.t01	Wine grape	cytosol	55.56	57.8
KRH51682	Soybean	extracellular, golgi	57.22	56.59
VIT_18s0001g14790.t01	Wine grape	endoplasmic reticulum, golgi	56.39	56.55
KRH17463	Soybean	endoplasmic reticulum, golgi	56.94	56.47
KRH05980	Soybean	endoplasmic reticulum, golgi	56.67	56.2
KRH61020	Soybean	endoplasmic reticulum, golgi, plastid	56.11	55.49
VIT_18s0001g14760.t01	Wine grape	extracellular	42.5	54.84
CDX85929	Canola	endoplasmic reticulum, plasma membrane	55.0	54.7
Bra003736.1-P	Field mustard	extracellular, plasma membrane	54.72	54.42
CDX73211	Canola	extracellular	54.72	54.42
KRH61019	Soybean	extracellular, plasma membrane	53.89	54.34
Bra015802.1-P	Field mustard	extracellular	54.44	54.14
CDX87651	Canola	extracellular	54.44	54.14
AT1G75900.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	54.72	54.12
CDX68113	Canola	endoplasmic reticulum, plasma membrane	54.17	53.87
KRH51681	Soybean	extracellular, plasma membrane	53.33	53.78
VIT_18s0001g14780.t01	Wine grape	plasma membrane	49.72	53.27
CDX87653	Canola	cytosol	45.28	53.27
Bra015804.1-P	Field mustard	cytosol	45.0	52.94
VIT_18s0001g14800.t01	Wine grape	extracellular, golgi	53.33	52.75
CDY42062	Canola	cytosol	41.11	51.39
KRH17460	Soybean	nucleus	51.39	51.1
KRH05976	Soybean	nucleus	52.78	51.08
Bra015803.1-P	Field mustard	cytosol	48.89	50.87
CDY69331	Canola	cytosol	36.11	50.39
KRH17461	Soybean	nucleus	51.39	50.27
KRH05977	Soybean	nucleus	51.94	50.27
Bra035295.1-P	Field mustard	mitochondrion	39.72	49.65
AT1G75880.1	Thale cress	golgi, plasma membrane	51.67	49.6
Bra003737.1-P	Field mustard	cytosol, plastid	44.17	49.38
KRH17462	Soybean	extracellular, plasma membrane, plastid	50.28	49.32
CDY65553	Canola	extracellular	45.0	49.09
KRH51683	Soybean	plasma membrane	38.89	48.95
CDY53562	Canola	extracellular	33.61	48.79
CDX87652	Canola	golgi, plasma membrane	49.17	48.76
KRH05978	Soybean	plastid	50.83	48.54
CDX73210	Canola	golgi, mitochondrion, plasma membrane	49.72	48.51
GSMUA_Achr5P11240_001	Banana	extracellular, golgi	48.61	48.48
CDY48852	Canola	extracellular	43.89	48.47
AT5G42170.1	Thale cress	extracellular	49.44	48.24
Bra027858.1-P	Field mustard	extracellular	46.67	48.14
CDY70534	Canola	plasma membrane	50.0	48.13
CDX85928	Canola	plasma membrane	49.72	47.86
CDY53577	Canola	extracellular	43.33	47.85
Bra027859.1-P	Field mustard	extracellular	46.39	47.85
AT3G43570.1	Thale cress	extracellular	42.5	47.81
CDY64565	Canola	extracellular	42.5	47.81
AT1G58725.1	Thale cress	extracellular	46.11	47.56
AT1G59030.1	Thale cress	extracellular, plasma membrane	46.11	47.56
AT1G59406.1	Thale cress	extracellular	46.11	47.56
CDY41727	Canola	extracellular	43.06	47.55
AT3G43550.1	Thale cress	extracellular	37.78	47.22
CDY09420	Canola	extracellular	41.94	47.19
GSMUA_Achr4P25550_001	Banana	extracellular, golgi, vacuole	47.5	47.11
CDY36116	Canola	extracellular, plasma membrane	41.67	47.02
Bra026636.1-P	Field mustard	extracellular	45.56	46.99
CDY41728	Canola	extracellular	42.5	46.93
AT1G58525.1	Thale cress	extracellular	44.44	46.78
AT3G14820.1	Thale cress	extracellular, plasma membrane	45.56	46.72
Os10t0438600-01	Rice	plasma membrane	46.39	46.65
GSMUA_Achr4P25560_001	Banana	extracellular, golgi	47.5	46.59
GSMUA_Achr11P...	Banana	endoplasmic reticulum, vacuole	42.78	46.53
Bra027951.1-P	Field mustard	extracellular	45.0	46.42
Zm00001d032888_P001	Maize	mitochondrion	46.94	46.3
Bra010987.1-P	Field mustard	plasma membrane	44.72	46.26
CDY32339	Canola	extracellular, plasma membrane	45.0	46.15
CDY20086	Canola	extracellular, plasma membrane	44.72	46.13
CDY51993	Canola	plasma membrane	40.83	46.08
EER99270	Sorghum	extracellular, plasma membrane	45.83	45.83
AT1G20120.1	Thale cress	plasma membrane	50.83	45.52
CDY53576	Canola	extracellular	42.22	45.37
AT1G20132.1	Thale cress	extracellular, vacuole	47.78	44.91
CDY02386	Canola	golgi	48.89	44.9
TraesCS1D01G138700.1	Wheat	endoplasmic reticulum, vacuole	46.39	44.77
TraesCS1A01G135900.1	Wheat	plastid	46.11	44.62
Bra016475.1-P	Field mustard	plastid	46.94	44.59
HORVU1Hr1G036440.1	Barley	endoplasmic reticulum, extracellular, plastid	45.83	44.35
Bra027950.1-P	Field mustard	extracellular	43.06	44.29
CDY71031	Canola	cytosol	12.22	44.0
Os09t0540400-02	Rice	extracellular, plasma membrane	44.72	43.99
Os02t0101400-01	Rice	cytosol	34.44	43.97
TraesCS1B01G156300.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	45.28	43.82
Os03t0859100-01	Rice	golgi	44.17	43.56
Bra012211.1-P	Field mustard	endoplasmic reticulum, plasma membrane	50.56	43.44
CDY57591	Canola	endoplasmic reticulum, plasma membrane	50.56	43.44
GSMUA_Achr4P25720_001	Banana	vacuole	43.61	43.37
AT1G75890.3	Thale cress	plastid	47.5	43.29
TraesCS2A01G477400.1	Wheat	golgi, vacuole	43.61	43.25
EER90469	Sorghum	extracellular, vacuole	45.28	43.12
CDY44206	Canola	plasma membrane	45.56	42.93
TraesCS7A01G339400.1	Wheat	extracellular	41.39	42.57
TraesCS7B01G250800.1	Wheat	extracellular	41.39	42.57
TraesCS6A01G111000.1	Wheat	extracellular, golgi	41.11	42.17
TraesCS5D01G566800.1	Wheat	endoplasmic reticulum, golgi	43.33	42.05
TraesCS7D01G347000.1	Wheat	extracellular	40.83	42.0
TraesCS2B01G500500.1	Wheat	mitochondrion	43.61	41.98
TraesCS4B01G010200.1	Wheat	endoplasmic reticulum	43.06	41.89
TraesCS6B01G139100.1	Wheat	extracellular, golgi	40.83	41.88
HORVU5Hr1G125000.1	Barley	vacuole	43.06	41.78
TraesCS5B01G562600.1	Wheat	golgi, mitochondrion	43.06	41.78
TraesCS2D01G476600.1	Wheat	mitochondrion	43.33	41.71
TraesCS4A01G316500.1	Wheat	golgi	42.78	41.29
CDY54336	Canola	extracellular, golgi, plasma membrane	35.0	41.18
PGSC0003DMT400001826	Potato	endoplasmic reticulum, extracellular, vacuole	40.56	41.01
Zm00001d034917_P001	Maize	mitochondrion	42.78	40.96
TraesCS7B01G250700.1	Wheat	extracellular, vacuole	40.0	40.79
HORVU6Hr1G001510.1	Barley	endoplasmic reticulum, vacuole	43.61	40.78
Zm00001d022615_P001	Maize	mitochondrion, plasma membrane	46.39	40.73
PGSC0003DMT400068453	Potato	cytosol	38.89	40.58
TraesCS7D01G346700.1	Wheat	extracellular	40.0	40.56
TraesCS1A01G322600.1	Wheat	mitochondrion	44.17	40.36
TraesCS4A01G303600.1	Wheat	cytosol	23.61	40.28
KXG38464	Sorghum	cytosol	47.5	40.14
TraesCS5A01G327300.1	Wheat	cytosol	24.72	40.09
TraesCS1D01G322600.1	Wheat	mitochondrion, plastid	43.61	39.85
HORVU7Hr1G083440.4	Barley	extracellular	39.17	39.72
Os06t0351500-01	Rice	endoplasmic reticulum, golgi, mitochondrion, plastid	41.67	39.68
TraesCS2B01G297300.1	Wheat	plasma membrane	38.61	39.6
Os10t0140300-01	Rice	plasma membrane	38.33	39.54
EER97970	Sorghum	plastid	41.94	39.32
TraesCS2D01G278500.1	Wheat	plasma membrane, vacuole	38.33	39.32
HORVU7Hr1G083530.2	Barley	golgi	41.39	39.31
PGSC0003DMT400058744	Potato	plasma membrane	39.44	39.01
PGSC0003DMT400001828	Potato	extracellular	38.06	38.81
HORVU2Hr1G107400.3	Barley	mitochondrion	23.89	38.56
TraesCS6D01G093000.1	Wheat	extracellular, plasma membrane	39.17	38.52
TraesCS6D01G002800.1	Wheat	mitochondrion	43.61	38.39
EER88779	Sorghum	extracellular, golgi, mitochondrion, plastid	40.56	38.32
Zm00001d018791_P001	Maize	plastid	41.39	38.3
TraesCS6B01G133500.1	Wheat	extracellular	38.61	38.29
PGSC0003DMT400086168	Potato	extracellular	33.61	38.17
TraesCS5B01G562700.1	Wheat	golgi	40.28	37.86
TraesCS6B01G007700.1	Wheat	plastid	43.89	37.8
TraesCS6A01G104300.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	39.17	37.7
TraesCS1B01G334900.1	Wheat	plastid	44.44	37.65
PGSC0003DMT400038808	Potato	golgi, plasma membrane	37.22	37.64
KXG34395	Sorghum	plastid	40.83	37.5
TraesCS4A01G316400.1	Wheat	mitochondrion	40.28	37.47
PGSC0003DMT400038810	Potato	extracellular	36.11	36.72
HORVU2Hr1G068430.1	Barley	endoplasmic reticulum, mitochondrion, plasma membrane	38.06	36.24
TraesCS5D01G566700.1	Wheat	mitochondrion	40.28	35.98
HORVU5Hr1G124980.2	Barley	plastid	40.83	35.94
TraesCS7D01G346900.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	23.89	35.83
HORVU6Hr1G018750.1	Barley	endoplasmic reticulum, plasma membrane	38.61	35.73
TraesCS7A01G339300.1	Wheat	cytosol	25.83	34.07
TraesCS6A01G002700.1	Wheat	mitochondrion	43.89	33.69
PGSC0003DMT400027838	Potato	extracellular	33.33	33.52
Zm00001d014918_P001	Maize	mitochondrion	43.06	32.7
CDY71376	Canola	plastid	44.17	32.45
CDY12974	Canola	golgi, mitochondrion	48.33	32.16
VIT_18s0001g14770.t01	Wine grape	plastid	54.72	31.37
OQU84135	Sorghum	plasma membrane	42.78	29.5
AT1G20130.1	Thale cress	mitochondrion	43.33	29.21
CDY44205	Canola	plasma membrane	42.5	27.72
PGSC0003DMT400025571	Potato	cytosol, plasma membrane, plastid	45.0	23.01
Zm00001d014308_P001	Maize	endoplasmic reticulum	37.78	20.83
Bra012212.1-P	Field mustard	plastid	42.78	19.47
CDY29371	Canola	plasma membrane	44.44	18.39
CDY67439	Canola	plasma membrane	45.0	18.06
KXG38704	Sorghum	endoplasmic reticulum, plasma membrane	37.5	17.95
Bra025794.1-P	Field mustard	plasma membrane	44.17	17.87
PGSC0003DMT400091356	Potato	cytosol, nucleus, plasma membrane	34.44	15.74

Protein Annotations

EnsemblPlants:PGSC0003DMT400075642	EnsemblPlantsGene:PGSC0003DMG400029420	EntrezGene:102586779	Gene3D:3.40.50.1110	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like
PANTHER:PTHR22835	PANTHER:PTHR22835:SF330	PFAM:PF00657	PGSC:PGSC0003DMG400029420	RefSeq:XP_015162092.1	SignalP:SignalP-noTM
SUPFAM:SSF52266	UniParc:UPI000296DA6A	UniProt:M1CVJ2	MapMan:35.1	:	:

Description

Zinc finger protein [Source:PGSC_GENE;Acc:PGSC0003DMG400029420]

Coordinates

chr12:+:57157076..57162030

Molecular Weight (calculated)

40076.4 Da

IEP (calculated)

6.282

GRAVY (calculated)

-0.077

Length

360 amino acids

Sequence
(BLAST)

001: MLYSCSSLLF SLHYVMFLYL LCEGKTQLLS KNSTIKAVFA FGDSIVDQGN NNNITTIVKC NFSPYGKDFV DGKATGRFTN AKTPADLIVE ELGIKELMPA
101: YRDPNLQVED LKTGVSFASG ASGYDPQTAS IVSVIPLSTQ LNYFEEYIGK LKGLVGEKEA NKIVNNSLYL VVAGSNDLAN TYYTIGLRQK QYDIDSYTDL
201: MVDKAEDFIQ ELYKLGARKI GVFGIPPIGC MPCQRTLSGG LGRLCVEEHN QAAQLANTKI SLALNGSLSK KLPQSKLVFI DIYDPMLDLI LNPQKYGFEV
301: VDKGCCGTGN IEVVILCNRY MSSTCEDGSK YLFWDSYHPT ERGYRILVDQ MIKKYINRFM

Best Arabidopsis Sequence Match ( AT1G75900.1 )
(BLAST)

001: MKDNSSWSCS CSWSSWKICL LSVLFLTETI TAVKLPPKLI IPAVIAFGDS IVDTGMNNNV KTVVKCDFLP YGINFQSGVA TGRFCDGRVP ADLLAEELGI
101: KSIVPAYLDP NLKSKDLLTG VSFASGGSGY DPITPKLVAV ISLEDQLSYF EEYIEKVKNI VGEARKDFIV ANSLFLLVAG SDDIANTYYT LRARPEYDVD
201: SYTTLMSDSA SEFVTKLYGY GVRRVAVFGA PPIGCVPSQR TLGGGILRDC ADNYNEAAKL FNSKLSPKLD SLRKTLPGIK PIYINIYDPL FDIIQNPANY
301: GFEVSNKGCC GTGAIEVAVL CNKITSSVCP DVSTHVFWDS YHPTEKTYKV LVSLLINKFV NQFV

Arabidopsis Description

EXL3GDSL esterase/lipase EXL3 [Source:UniProtKB/Swiss-Prot;Acc:Q94CH6]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.