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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, golgi, plastid, extracellular

Predictor Summary:
  • plastid 2
  • nucleus 1
  • mitochondrion 2
  • extracellular 3
  • plasma membrane 2
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, golgi, mitochondrion, plastid
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:plastid
EpiLoc:nucleus
iPSORT:mitochondrion
MultiLoc:extracellular
Plant-mPloc:extracellular, plasma membrane
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:golgi
PPI

Inferred distinct locusB in Crop

locusBlocations
EES02290
EES19830
OQU75676

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G75880.1 EES02290 AT3G16310.1 21798944
AT1G75880.1 EES19830 AT3G16310.1 21798944
AT1G75880.1 OQU75676 AT5G24290.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER97970 Sorghum plastid 72.44 71.88
KXG34395 Sorghum plastid 69.55 67.6
VIT_18s0001g14810.t01 Wine grape cytosol 42.52 46.82
KRH55993 Soybean extracellular 43.83 46.13
VIT_18s0001g14790.t01 Wine grape endoplasmic reticulum, golgi 43.31 45.96
KRH55991 Soybean extracellular 43.57 45.86
Solyc04g081790.2.1 Tomato extracellular, plasma membrane 41.73 45.43
CDX87653 Canola cytosol 36.48 45.42
KRH28831 Soybean plasma membrane 43.57 45.36
VIT_18s0001g14760.t01 Wine grape extracellular 33.07 45.16
Bra015804.1-P Field mustard cytosol 36.22 45.1
Solyc04g081770.2.1 Tomato cytosol 40.16 44.87
Bra015803.1-P Field mustard cytosol 40.42 44.51
KRH55990 Soybean extracellular, plasma membrane, vacuole 42.52 44.38
EER99270 Sorghum extracellular, plasma membrane 41.73 44.17
VIT_18s0001g14780.t01 Wine grape plasma membrane 38.85 44.05
VIT_18s0001g14800.t01 Wine grape extracellular, golgi 41.99 43.96
Bra015802.1-P Field mustard extracellular 41.73 43.92
CDX85929 Canola endoplasmic reticulum, plasma membrane 41.73 43.92
CDX87651 Canola extracellular 41.73 43.92
KRH17462 Soybean extracellular, plasma membrane, plastid 42.26 43.87
CDY42062 Canola cytosol 33.07 43.75
KRH61019 Soybean extracellular, plasma membrane 40.94 43.7
CDX73211 Canola extracellular 41.47 43.65
KRH17460 Soybean nucleus 41.47 43.65
Bra003736.1-P Field mustard extracellular, plasma membrane 41.21 43.37
CDX68113 Canola endoplasmic reticulum, plasma membrane 41.21 43.37
PGSC0003DMT400025569 Potato extracellular 40.16 43.34
CDX87652 Canola golgi, plasma membrane 41.21 43.25
KRH17461 Soybean nucleus 41.73 43.21
KRH51681 Soybean extracellular, plasma membrane 40.42 43.14
KRH51682 Soybean extracellular, golgi 41.21 43.13
KRH61020 Soybean endoplasmic reticulum, golgi, plastid 40.94 42.86
CDY64565 Canola extracellular 35.96 42.81
KRH17463 Soybean endoplasmic reticulum, golgi 40.68 42.7
PGSC0003DMT400025568 Potato extracellular 39.11 42.57
KRH05978 Soybean plastid 41.99 42.44
KRH05980 Soybean endoplasmic reticulum, golgi 40.42 42.42
CDY20086 Canola extracellular, plasma membrane 38.85 42.41
CDY53577 Canola extracellular 36.22 42.33
CDY36116 Canola extracellular, plasma membrane 35.43 42.32
CDY51993 Canola plasma membrane 35.43 42.32
CDX73210 Canola golgi, mitochondrion, plasma membrane 40.94 42.28
KRH05976 Soybean nucleus 41.21 42.2
KRH05977 Soybean nucleus 41.21 42.2
CDY09420 Canola extracellular 35.43 42.19
AT3G14820.1 Thale cress extracellular, plasma membrane 38.85 42.17
CDY32339 Canola extracellular, plasma membrane 38.85 42.17
PGSC0003DMT400070969 Potato extracellular 23.62 42.06
AT1G75900.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 40.16 42.03
CDY41727 Canola extracellular 35.96 42.02
KRH69753 Soybean extracellular, plasma membrane, vacuole 40.16 41.92
CDY65553 Canola extracellular 36.22 41.82
Solyc12g089350.1.1 Tomato extracellular, golgi 37.8 41.74
CDY48852 Canola extracellular 35.7 41.72
KRH51683 Soybean plasma membrane 31.23 41.61
AT3G43570.1 Thale cress extracellular 34.91 41.56
CDY53562 Canola extracellular 27.03 41.53
KRH08025 Soybean extracellular, vacuole 39.9 41.53
AT5G42170.1 Thale cress extracellular 40.16 41.46
KRH69760 Soybean extracellular 39.37 41.44
CDY41728 Canola extracellular 35.43 41.41
Bra010987.1-P Field mustard plasma membrane 37.8 41.38
Solyc04g081800.1.1 Tomato extracellular, plasma membrane 38.85 41.34
Bra027858.1-P Field mustard extracellular 37.8 41.26
Solyc06g048670.2.1 Tomato extracellular 38.06 41.08
EER90469 Sorghum extracellular, vacuole 40.68 41.01
Bra003737.1-P Field mustard cytosol, plastid 34.65 40.99
AT1G58725.1 Thale cress extracellular 37.53 40.97
AT1G59030.1 Thale cress extracellular, plasma membrane 37.53 40.97
AT1G59406.1 Thale cress extracellular 37.53 40.97
Bra026636.1-P Field mustard extracellular 37.53 40.97
Bra027859.1-P Field mustard extracellular 37.53 40.97
AT3G43550.1 Thale cress extracellular 30.97 40.97
AT1G58525.1 Thale cress extracellular 36.75 40.94
Solyc04g081760.2.1 Tomato extracellular 28.35 40.75
PGSC0003DMT400075642 Potato extracellular 38.32 40.56
Solyc04g081780.2.1 Tomato extracellular 36.48 40.52
Bra027951.1-P Field mustard extracellular 37.01 40.4
CDY70534 Canola plasma membrane 39.37 40.11
AT1G75880.1 Thale cress golgi, plasma membrane 39.37 40.0
CDY53576 Canola extracellular 35.17 40.0
CDX85928 Canola plasma membrane 39.11 39.84
Bra027950.1-P Field mustard extracellular 36.22 39.43
AT1G20132.1 Thale cress extracellular, vacuole 38.58 38.38
EES03823 Sorghum plasma membrane 34.91 38.11
CDY44206 Canola plasma membrane 37.53 37.43
KRH08023 Soybean extracellular 28.61 37.33
CDY69331 Canola cytosol 25.2 37.21
AT1G75890.3 Thale cress plastid 38.32 36.96
AT1G20120.1 Thale cress plasma membrane 38.85 36.82
KXG38464 Sorghum cytosol 40.94 36.62
EER96404 Sorghum extracellular, vacuole 34.12 35.81
Bra035295.1-P Field mustard mitochondrion 27.03 35.76
Bra012211.1-P Field mustard endoplasmic reticulum, plasma membrane 39.11 35.56
CDY57591 Canola endoplasmic reticulum, plasma membrane 39.11 35.56
CDY02386 Canola golgi 36.48 35.46
Bra016475.1-P Field mustard plastid 35.17 35.36
OQU76903 Sorghum plastid 32.81 34.44
CDY71031 Canola cytosol 8.92 34.0
EER94394 Sorghum extracellular 30.97 33.05
OQU84537 Sorghum endoplasmic reticulum, extracellular 30.18 32.3
EES16382 Sorghum extracellular, golgi 30.71 32.05
EER90082 Sorghum golgi 30.71 31.79
CDY54336 Canola extracellular, golgi, plasma membrane 24.15 30.07
EES04670 Sorghum extracellular 29.4 29.71
OQU78161 Sorghum extracellular 29.66 29.12
AT1G20130.1 Thale cress mitochondrion 39.11 27.9
CDY71376 Canola plastid 35.7 27.76
KXG26546 Sorghum mitochondrion, plastid 32.55 27.62
OQU84135 Sorghum plasma membrane 37.8 27.59
EER87686 Sorghum extracellular 29.92 25.68
CDY12974 Canola golgi, mitochondrion 36.22 25.51
VIT_18s0001g14770.t01 Wine grape plastid 41.99 25.48
CDY44205 Canola plasma membrane 33.07 22.83
PGSC0003DMT400025571 Potato cytosol, plasma membrane, plastid 37.27 20.17
KXG38704 Sorghum endoplasmic reticulum, plasma membrane 37.01 18.75
Bra012212.1-P Field mustard plastid 33.6 16.18
CDY29371 Canola plasma membrane 35.96 15.75
CDY67439 Canola plasma membrane 36.48 15.5
Bra025794.1-P Field mustard plasma membrane 35.96 15.39
Protein Annotations
Gene3D:3.40.50.1110MapMan:35.1EntrezGene:8069384UniProt:C5Z7B9EnsemblPlants:EER88779ProteinID:EER88779
ProteinID:EER88779.1InterPro:GDSLGO:GO:0003674GO:GO:0003824GO:GO:0016787GO:GO:0016788
InterPro:IPR036514PFAM:PF00657PANTHER:PTHR22835PANTHER:PTHR22835:SF242InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_like
EnsemblPlantsGene:SORBI_3010G218800SUPFAM:SSF52266SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0001A88ED6RefSeq:XP_002437412.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr10:+:56141769..56146351
Molecular Weight (calculated)
41268.5 Da
IEP (calculated)
5.373
GRAVY (calculated)
0.076
Length
381 amino acids
Sequence
(BLAST)
001: MASSSPLACC MGRNGGGYAR CQQVVLLLLA LAVVVLLPPS AAVHGSGGGE SGGFEDISAI FMFGDSIVDP GNNNHRLTEA RANFPPYGQD FPGGVATGRF
101: SNGLVPGDLL ASKLGVKELL PPYLADDLQP NDLLTGVAFA SGGSGYDPLT STLSTARSSA EQLELFHDYK EKVAAIVGEE KMTHIISKAI FFTIMGANDI
201: VNNYFAVPLR RHEYDLPSYM DFLVSSAINF TMTLNNMGAK KIGIVGVPPL GCCPSQIILG GSPSRECEPQ RNQASILFNL KISKEIDRLN AEWNGYGSKF
301: VYIDIYYNLL DLIQNPAFYG FKEVKEGCCG STVLSAAVFI AYHNACPNVI DYIFWDGFHP TEKAYNIVVD KLIQQNRKYL V
Best Arabidopsis Sequence Match ( AT1G75880.2 )
(BLAST)
001: MERCRSGHHR IISYYLSSSL ILFWCIFVLV LLSTTSTTNA LVKIPKNTTV PAVIVFGDSI VDAGNNDDMI TEARCDYAPY GIDFDGGVAT GRFSNGKVPG
101: DIVAEELGIK PNIPAYRNPN LKPEELLTGV TFASGGAGYV PLTTKIAGGI PLPQQLIYFE EYIEKLKQMV GEKRTKFIIK NSLFVVICGS NDIANDFFTL
201: PPVRLHYTVA SFTALMADNA RSFAQTLYGY GARRILVFGA PPIGCVPSQR TVAGGPTRDC VARFNDAAKL FNTKLSANID VLSRTLQDPT IIYIDIYSPL
301: LDLILNPHQY GFKVANKGCC GTGLIEVTAL CNNYTASVCP IRSDYVFWDS FHPTEKAYRI IVAKLLDRYL NRFF
Arabidopsis Description
EXL1GDSL esterase/lipase EXL1 [Source:UniProtKB/Swiss-Prot;Acc:Q94CH8]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.