Skip to main content
crop-pal logo
Sorghum
Search for another protein from :
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 6
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:mitochondrion
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d036770_P001 Maize mitochondrion 87.77 86.83
Zm00001d046642_P001 Maize extracellular, golgi 90.49 85.6
Os06t0636700-01 Rice extracellular 74.46 71.73
TraesCS7D01G384600.1 Wheat endoplasmic reticulum, extracellular, golgi 69.02 69.78
HORVU7Hr1G092040.2 Barley golgi 69.84 69.65
TraesCS7A01G388700.1 Wheat extracellular 69.02 69.59
TraesCS7B01G290600.1 Wheat golgi 68.48 68.85
OQU84537 Sorghum endoplasmic reticulum, extracellular 66.03 68.26
GSMUA_Achr7P05490_001 Banana endoplasmic reticulum, extracellular 62.77 65.62
GSMUA_Achr3P13030_001 Banana endoplasmic reticulum, golgi 60.05 62.61
KRH14826 Soybean endoplasmic reticulum, extracellular 50.82 54.05
KRH73314 Soybean endoplasmic reticulum, extracellular 51.36 54.0
AT4G26790.1 Thale cress extracellular, golgi 50.54 52.99
VIT_19s0090g01160.t01 Wine grape extracellular, golgi 49.46 52.91
Bra026402.1-P Field mustard extracellular 50.0 52.42
CDX89302 Canola extracellular 49.73 52.14
CDY29250 Canola extracellular 49.73 52.14
Bra004735.1-P Field mustard extracellular 46.74 51.04
KRH46013 Soybean extracellular 48.1 50.57
PGSC0003DMT400001828 Potato extracellular 48.37 50.42
CDY53653 Canola extracellular, plasma membrane 47.83 50.29
PGSC0003DMT400038808 Potato golgi, plasma membrane 48.64 50.28
CDY55498 Canola extracellular, plasma membrane 47.55 50.0
KRG98969 Soybean extracellular 47.83 49.72
AT2G42990.1 Thale cress extracellular 47.28 49.71
Solyc05g043330.2.1 Tomato plasma membrane 47.83 49.3
Solyc07g049430.2.1 Tomato extracellular 47.28 49.29
Solyc07g049440.2.1 Tomato extracellular 46.74 48.59
PGSC0003DMT400001826 Potato endoplasmic reticulum, extracellular, vacuole 46.47 48.03
PGSC0003DMT400038810 Potato extracellular 46.2 48.02
AT2G04570.1 Thale cress extracellular 45.38 47.71
KRH14825 Soybean nucleus 45.65 46.93
EES04670 Sorghum extracellular 47.83 46.68
Bra013200.1-P Field mustard extracellular 44.57 46.59
CDX93056 Canola extracellular 44.57 46.59
OQU76903 Sorghum plastid 45.92 46.56
KRH73315 Soybean nucleus 45.11 46.37
CDY15057 Canola extracellular 44.29 46.31
EER96404 Sorghum extracellular, vacuole 45.38 46.01
KRH17906 Soybean endoplasmic reticulum, extracellular 42.93 45.27
EES16382 Sorghum extracellular, golgi 44.57 44.93
EER94394 Sorghum extracellular 43.48 44.82
EER99270 Sorghum extracellular, plasma membrane 41.03 41.94
Solyc05g043320.1.1 Tomato cytosol 25.54 41.23
KXG26546 Sorghum mitochondrion, plastid 48.64 39.87
EER90469 Sorghum extracellular, vacuole 34.78 33.86
EES03823 Sorghum plasma membrane 32.07 33.81
OQU78161 Sorghum extracellular 35.6 33.76
EER97970 Sorghum plastid 33.15 31.77
EER88779 Sorghum extracellular, golgi, mitochondrion, plastid 31.79 30.71
KXG34395 Sorghum plastid 31.52 29.59
KXG38464 Sorghum cytosol 34.24 29.58
EER87686 Sorghum extracellular 34.78 28.83
VIT_12s0059g01590.t01 Wine grape extracellular 51.09 28.57
OQU84135 Sorghum plasma membrane 36.96 26.05
KXG38704 Sorghum endoplasmic reticulum, plasma membrane 29.62 14.49
Protein Annotations
Gene3D:3.40.50.1110MapMan:35.1EntrezGene:8083493UniProt:C5Z6B4EnsemblPlants:EER90082ProteinID:EER90082
ProteinID:EER90082.1InterPro:GDSLGO:GO:0003674GO:GO:0003824GO:GO:0016787GO:GO:0016788
InterPro:IPR036514PFAM:PF00657PFscan:PS51257PANTHER:PTHR22835PANTHER:PTHR22835:SF193InterPro:SGNH_hydro_sf
InterPro:SGNH_plant_lipase_likeEnsemblPlantsGene:SORBI_3010G200900SUPFAM:SSF52266SignalP:SignalP-noTMUniParc:UPI0001A89A41RefSeq:XP_002438715.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr10:-:54376817..54380917
Molecular Weight (calculated)
40363.5 Da
IEP (calculated)
7.544
GRAVY (calculated)
-0.045
Length
368 amino acids
Sequence
(BLAST)
001: MASPRGAHRR ASVAALLLAL SCCFCCRAGA RADPSSSGEP KAVPAVIVFG DSTVDTGNNN GIGTILKSDF PPYGRDMAGG AKPTGRFCNG RLPPDFISEA
101: LGLPPLVPAY LDPAYGIQDF AQGVCFASAG TGLDNKTAGV LSVIPLWKEV EYFKEYKRRL RRHVGRATAR RIVSDALYVV SIGTNDFLEN YFLLVTGRFA
201: EFTVGEFEDF LVAQAEWFLG QIHALGARRV TFAGLSPIGC LPLERTLNAL RGGCVEEYNQ VARDYNAKVL DMLRRVMAAR PGLKVAYIDV YKNMLDLITN
301: PSTLGLENVE EGCCATGKVE MSYLCNDKSP HTCQDADKYF FWDSFHPTQK VNQFFAKKTL DLCYQELL
Best Arabidopsis Sequence Match ( AT4G26790.2 )
(BLAST)
001: MQRNRVLAFL LLAAQLLVKI PETCAKFPAL IVFGDSTVDS GNNNQISTVL KSNFQPYGRD YFDGKATGRF SNGRIAPDFI SEGLGLKNAV PAYLDPAYNI
101: ADFATGVCFA SAGTGLDNAT SAVLSVMPLW KEVEYYKEYQ TRLRSYLGEE KANEIISESL YLISIGTNDF LENYYLLPRK LRKYSVNEYQ YFLIGIAADF
201: VTDIYRLGAR KMSLSGLSPF GCLPLERTTQ LFYGSKCIEE YNIVARDFNI KMEEKVFQLN RDLNGIQLVF SNPYDLVSEI IYHPEAFGFE NVRSACCGTG
301: YYEMSYLCDK MNPFTCSDAS KYVFWDSFHP TEKTNAIVAN HVLKYDLSRF Q
Arabidopsis Description
GDSL esterase/lipase At4g26790 [Source:UniProtKB/Swiss-Prot;Acc:Q8VY93]
SUBAcon: [golgi,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.