CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 4
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d053252_P001	Maize	extracellular, golgi, mitochondrion	68.6	89.02
TraesCSU01G187000.1	Wheat	extracellular	55.46	72.17
TraesCSU01G210200.1	Wheat	extracellular	56.57	72.16
TraesCSU01G186900.1	Wheat	extracellular	56.57	72.16
TraesCS3A01G007800.1	Wheat	endoplasmic reticulum, extracellular	56.57	72.16
TraesCS3D01G002900.1	Wheat	plastid	56.35	70.67
HORVU3Hr1G001200.2	Barley	mitochondrion	53.9	58.74
GSMUA_Achr4P09480_001	Banana	endoplasmic reticulum, golgi	41.87	53.71
GSMUA_Achr2P05280_001	Banana	extracellular	37.19	52.68
OQU84537	Sorghum	endoplasmic reticulum, extracellular	40.76	51.4
Bra004735.1-P	Field mustard	extracellular	37.86	50.45
KRH46013	Soybean	extracellular	39.2	50.29
CDY53653	Canola	extracellular, plasma membrane	38.53	49.43
AT2G42990.1	Thale cress	extracellular	38.31	49.14
CDX89302	Canola	extracellular	38.31	49.0
Bra026402.1-P	Field mustard	extracellular	38.31	49.0
CDY29250	Canola	extracellular	38.31	49.0
PGSC0003DMT400001826	Potato	endoplasmic reticulum, extracellular, vacuole	38.75	48.88
KRG98969	Soybean	extracellular	38.53	48.87
CDY55498	Canola	extracellular, plasma membrane	38.08	48.86
OQU76903	Sorghum	plastid	39.42	48.76
EER90082	Sorghum	golgi	39.87	48.64
Solyc07g049440.2.1	Tomato	extracellular	38.31	48.59
KRH73314	Soybean	endoplasmic reticulum, extracellular	37.86	48.57
VIT_19s0090g01160.t01	Wine grape	extracellular, golgi	37.19	48.55
PGSC0003DMT400038810	Potato	extracellular	37.86	48.02
KRH14826	Soybean	endoplasmic reticulum, extracellular	36.75	47.69
EER94394	Sorghum	extracellular	37.42	47.06
AT4G26790.1	Thale cress	extracellular, golgi	36.53	46.72
PGSC0003DMT400038808	Potato	golgi, plasma membrane	36.97	46.63
Solyc05g043330.2.1	Tomato	plasma membrane	36.97	46.5
EES04670	Sorghum	extracellular	38.98	46.42
EES16382	Sorghum	extracellular, golgi	37.64	46.3
EER96404	Sorghum	extracellular, vacuole	37.42	46.28
KRH14825	Soybean	nucleus	36.53	45.81
KRH73315	Soybean	nucleus	36.53	45.81
Solyc07g049430.2.1	Tomato	extracellular	35.86	45.61
PGSC0003DMT400001828	Potato	extracellular	35.86	45.61
KRH17906	Soybean	endoplasmic reticulum, extracellular	35.41	45.56
AT2G04570.1	Thale cress	extracellular	35.41	45.43
CDX93056	Canola	extracellular	35.19	44.89
CDY15057	Canola	extracellular	35.19	44.89
Bra013200.1-P	Field mustard	extracellular	35.19	44.89
Solyc05g043320.1.1	Tomato	cytosol	20.27	39.91
EER99270	Sorghum	extracellular, plasma membrane	31.18	38.89
EES03823	Sorghum	plasma membrane	29.62	38.11
EER90469	Sorghum	extracellular, vacuole	29.18	34.66
OQU78161	Sorghum	extracellular	29.84	34.54
EER97970	Sorghum	plastid	28.95	33.85
EER88779	Sorghum	extracellular, golgi, mitochondrion, plastid	27.62	32.55
KXG34395	Sorghum	plastid	28.06	32.14
KXG38464	Sorghum	cytosol	30.07	31.69
EER87686	Sorghum	extracellular	27.39	27.7
VIT_12s0059g01590.t01	Wine grape	extracellular	37.19	25.38
OQU84135	Sorghum	plasma membrane	29.4	25.29
KXG38704	Sorghum	endoplasmic reticulum, plasma membrane	27.17	16.22

Protein Annotations

Gene3D:3.40.50.1110	MapMan:35.1	EntrezGene:8073577	UniProt:A0A1B6PLJ5	InterPro:GDSL	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016788
InterPro:IPR036514	EnsemblPlants:KXG26546	ProteinID:KXG26546	ProteinID:KXG26546.1	PFAM:PF00657	PANTHER:PTHR22835
PANTHER:PTHR22835:SF336	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	EnsemblPlantsGene:SORBI_3006G118800	SUPFAM:SSF52266	TMHMM:TMhelix
UniParc:UPI00081AE89A	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:48600961..48605010

Molecular Weight (calculated)

48488.0 Da

IEP (calculated)

8.115

GRAVY (calculated)

0.110

Length

449 amino acids

Sequence
(BLAST)

001: MAAACCCSSC SKRHPSFRFR LACPAYYQKN RIIGPEPTSS MVAAAAAAVV HGRRRRRLHF LPAALLHLHL LLVPLPVPAV QAAARVTALI VFGDSTVDAG
101: NNNAIATAVR SNFPPYGRDF PFPPGRATGR FSNGRVATDF YSEALGLGRA FVPAYLDPDY GIRDMAVGVC FASAGSGLDV ATSRVFDSRC TFAGMQANPR
201: VLLRNPSFIE YLPVSGVNAT QRVIPLWKQV DMFREYKSRL ADHLGAAEAH AVVAGAVYAV SIGTNDFIEN YFALTTTRFL EFTLPEYTDY LVALARGFLA
301: ELYALGARKV GFTGLAPMGC LPLERARAGA LGRCADEYNA AARAFNAALA DMVRELGGEL PGADIRVAEV YDFFEDMVRD PGRHGFARAD VGCCGTGTYE
401: MGYACGAWAA AGTCPDADRY VFWDAVHPTE RASRLVADHL INTTFGRFV

Best Arabidopsis Sequence Match ( AT2G04570.1 )
(BLAST)

001: MGHLKSLFTI LFLIAMSSTV TFAGKIPAII VFGDSSVDAG NNNYIPTVAR SNFEPYGRDF VGGKPTGRFC NGKIATDFMS EALGLKPIIP AYLDPSYNIS
101: DFATGVTFAS AATGYDNATS DVLSVLPLWK QLEYYKEYQT KLKAYQGKDR GTETIESSLY LISIGTNDFL ENYFAFPGRS SQYSVSLYQD FLAGIAKEFV
201: KKLHGLGARK ISLGGLPPMG CMPLERATNI GTGGECVGRY NDIAVQFNSK LDKMVEKLSK ELPGSNLVFS NPYEPFMRII KNPSSFGFEV VGAACCATGM
301: FEMGYGCQRN NPFTCTNADK YVFWDSFHPT QKTNHIMANA LMNSTFPHFL

Arabidopsis Description

GDSL esterase/lipase At2g04570 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJB4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.