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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, plastid, secretory
BaCelLo:plastid
ChloroP:plastid
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
EES02290
EES19830
OQU75676

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G75880.1 EES02290 AT3G16310.1 21798944
AT1G75880.1 EES19830 AT3G16310.1 21798944
AT1G75880.1 OQU75676 AT5G24290.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d032888_P001 Maize mitochondrion 77.93 90.96
Os10t0438600-01 Rice plasma membrane 67.61 80.45
TraesCS1A01G135900.1 Wheat plastid 65.26 74.73
TraesCS1B01G156300.1 Wheat endoplasmic reticulum, plasma membrane, plastid 65.26 74.73
TraesCS1D01G138700.1 Wheat endoplasmic reticulum, vacuole 65.26 74.53
HORVU1Hr1G036440.1 Barley endoplasmic reticulum, extracellular, plastid 64.79 74.19
GSMUA_Achr5P11240_001 Banana extracellular, golgi 51.88 61.22
EER99270 Sorghum extracellular, plasma membrane 41.78 49.44
VIT_18s0001g14810.t01 Wine grape cytosol 39.67 48.84
KRH17463 Soybean endoplasmic reticulum, golgi 41.55 48.76
Solyc12g089350.1.1 Tomato extracellular, golgi 39.44 48.7
VIT_18s0001g14760.t01 Wine grape extracellular 31.69 48.39
PGSC0003DMT400025568 Potato extracellular 39.67 48.29
Solyc04g081770.2.1 Tomato cytosol 38.5 48.09
VIT_18s0001g14780.t01 Wine grape plasma membrane 37.79 47.92
CDX87653 Canola cytosol 34.27 47.71
PGSC0003DMT400075642 Potato extracellular 40.14 47.5
Solyc04g081790.2.1 Tomato extracellular, plasma membrane 38.97 47.43
KRH69753 Soybean extracellular, plasma membrane, vacuole 40.61 47.4
Bra015804.1-P Field mustard cytosol 34.04 47.39
KRH05980 Soybean endoplasmic reticulum, golgi 40.38 47.38
PGSC0003DMT400025569 Potato extracellular 39.2 47.31
KRH51682 Soybean extracellular, golgi 40.38 47.25
Solyc04g081760.2.1 Tomato extracellular 29.34 47.17
VIT_18s0001g14790.t01 Wine grape endoplasmic reticulum, golgi 39.67 47.08
KRH05977 Soybean nucleus 41.08 47.04
KRH17461 Soybean nucleus 40.61 47.01
KRH61019 Soybean extracellular, plasma membrane 39.2 46.78
Solyc06g048670.2.1 Tomato extracellular 38.73 46.74
PGSC0003DMT400070969 Potato extracellular 23.47 46.73
Bra015802.1-P Field mustard extracellular 39.67 46.69
CDX73211 Canola extracellular 39.67 46.69
CDX87651 Canola extracellular 39.67 46.69
KRH51681 Soybean extracellular, plasma membrane 38.97 46.5
KRH08025 Soybean extracellular, vacuole 39.91 46.45
KRH61020 Soybean endoplasmic reticulum, golgi, plastid 39.67 46.43
Solyc04g081780.2.1 Tomato extracellular 37.32 46.36
KRH55990 Soybean extracellular, plasma membrane, vacuole 39.67 46.3
AT1G75900.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 39.2 45.88
VIT_18s0001g14800.t01 Wine grape extracellular, golgi 39.2 45.88
AT1G75880.1 Thale cress golgi, plasma membrane 40.14 45.6
CDX85929 Canola endoplasmic reticulum, plasma membrane 38.73 45.58
Bra003736.1-P Field mustard extracellular, plasma membrane 38.5 45.3
Bra015803.1-P Field mustard cytosol 36.62 45.09
KRH28831 Soybean plasma membrane 38.73 45.08
CDX68113 Canola endoplasmic reticulum, plasma membrane 38.03 44.75
AT3G14820.1 Thale cress extracellular, plasma membrane 36.15 43.87
CDY42062 Canola cytosol 29.58 43.75
CDX85928 Canola plasma membrane 38.26 43.58
CDY70534 Canola plasma membrane 38.26 43.58
CDX87652 Canola golgi, plasma membrane 37.09 43.53
Bra003737.1-P Field mustard cytosol, plastid 32.86 43.48
AT3G43550.1 Thale cress extracellular 29.34 43.4
EER90469 Sorghum extracellular, vacuole 38.5 43.39
KRH17460 Soybean nucleus 36.85 43.37
KRH55991 Soybean extracellular 36.85 43.37
CDY20086 Canola extracellular, plasma membrane 35.45 43.27
CDY51993 Canola plasma membrane 32.39 43.26
KRH55993 Soybean extracellular 36.62 43.09
KRH17462 Soybean extracellular, plasma membrane, plastid 37.09 43.05
CDY32339 Canola extracellular, plasma membrane 35.45 43.02
AT5G42170.1 Thale cress extracellular 37.09 42.82
Bra010987.1-P Field mustard plasma membrane 34.98 42.82
KRH05978 Soybean plastid 37.79 42.71
CDY09420 Canola extracellular 31.92 42.5
CDY64565 Canola extracellular 31.92 42.5
KRH05976 Soybean nucleus 37.09 42.47
CDY36116 Canola extracellular, plasma membrane 31.69 42.32
AT3G43570.1 Thale cress extracellular 31.69 42.19
Solyc04g081800.1.1 Tomato extracellular, plasma membrane 35.45 42.18
AT1G58725.1 Thale cress extracellular 34.51 42.12
AT1G59030.1 Thale cress extracellular, plasma membrane 34.51 42.12
AT1G59406.1 Thale cress extracellular 34.51 42.12
CDY41727 Canola extracellular 32.16 42.02
CDX73210 Canola golgi, mitochondrion, plasma membrane 36.38 42.01
Bra026636.1-P Field mustard extracellular 34.27 41.83
CDY48852 Canola extracellular 31.92 41.72
CDY53577 Canola extracellular 31.92 41.72
Bra027858.1-P Field mustard extracellular 34.04 41.55
AT1G58525.1 Thale cress extracellular 33.33 41.52
CDY65553 Canola extracellular 32.16 41.52
KRH69760 Soybean extracellular 35.21 41.44
CDY41728 Canola extracellular 31.69 41.41
EER97970 Sorghum plastid 37.32 41.41
Bra027859.1-P Field mustard extracellular 33.57 40.97
Bra027951.1-P Field mustard extracellular 33.57 40.97
Bra035295.1-P Field mustard mitochondrion 27.7 40.97
EER88779 Sorghum extracellular, golgi, mitochondrion, plastid 36.62 40.94
CDY53576 Canola extracellular 31.69 40.3
KRH51683 Soybean plasma membrane 27.0 40.21
KRH08023 Soybean extracellular 27.23 39.73
AT1G20120.1 Thale cress plasma membrane 37.09 39.3
Bra027950.1-P Field mustard extracellular 32.16 39.14
CDY53562 Canola extracellular 22.77 39.11
CDY02386 Canola golgi 35.92 39.03
KXG34395 Sorghum plastid 35.92 39.03
AT1G75890.3 Thale cress plastid 35.92 38.73
EER94394 Sorghum extracellular 32.39 38.66
CDY69331 Canola cytosol 23.0 37.98
Bra012211.1-P Field mustard endoplasmic reticulum, plasma membrane 37.32 37.95
CDY57591 Canola endoplasmic reticulum, plasma membrane 37.32 37.95
EES03823 Sorghum plasma membrane 30.75 37.54
Bra016475.1-P Field mustard plastid 33.33 37.47
OQU76903 Sorghum plastid 31.92 37.47
CDY44206 Canola plasma membrane 33.33 37.17
CDY71031 Canola cytosol 8.69 37.0
EER96404 Sorghum extracellular, vacuole 31.46 36.91
AT1G20132.1 Thale cress extracellular, vacuole 33.1 36.81
OQU84537 Sorghum endoplasmic reticulum, extracellular 30.52 36.52
EES16382 Sorghum extracellular, golgi 30.05 35.07
EER90082 Sorghum golgi 29.58 34.24
OQU78161 Sorghum extracellular 30.52 33.51
EES04670 Sorghum extracellular 29.58 33.42
CDY54336 Canola extracellular, golgi, plasma membrane 23.0 32.03
OQU84135 Sorghum plasma membrane 38.5 31.42
KXG26546 Sorghum mitochondrion, plastid 31.69 30.07
VIT_18s0001g14770.t01 Wine grape plastid 42.49 28.82
EER87686 Sorghum extracellular 29.81 28.6
CDY12974 Canola golgi, mitochondrion 36.15 28.47
CDY71376 Canola plastid 32.63 28.37
AT1G20130.1 Thale cress mitochondrion 33.1 26.4
CDY44205 Canola plasma membrane 30.99 23.91
PGSC0003DMT400025571 Potato cytosol, plasma membrane, plastid 36.62 22.16
KXG38704 Sorghum endoplasmic reticulum, plasma membrane 32.39 18.35
Bra012212.1-P Field mustard plastid 31.92 17.19
CDY29371 Canola plasma membrane 32.86 16.09
Bra025794.1-P Field mustard plasma membrane 32.86 15.73
CDY67439 Canola plasma membrane 33.1 15.72
Protein Annotations
Gene3D:3.40.50.1110MapMan:35.1UniProt:A0A1B6QKL5InterPro:GDSLGO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016788InterPro:IPR036514
EnsemblPlants:KXG38464ProteinID:KXG38464ProteinID:KXG38464.1PFAM:PF00657PANTHER:PTHR22835PANTHER:PTHR22835:SF119
InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_likeEnsemblPlantsGene:SORBI_3001G238800SUPFAM:SSF52266TMHMM:TMhelixUniParc:UPI00081AD956
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr1:+:24537849..24539993
Molecular Weight (calculated)
46799.3 Da
IEP (calculated)
8.401
GRAVY (calculated)
-0.088
Length
426 amino acids
Sequence
(BLAST)
001: MIKIMLCKKR RGDHTSHDHK SLSNFGFPFS CNLIFAAPPA TATTMQEHHR ADRARAPKMA MSKRTASRAL LVMTATVLIL HRILCAAASA VVAAPPATKQ
101: TTRTPALFVF GDSIVDPGNN NAIMTTVRCN FAPYGQDFPG HNATGRFSNG KVPGDILASQ LGIKEYVPAY LGTELSDFDL LTGVSFASGG CGFDPLTAEL
201: VSVLTMDNQL DLFKEYKEKL KRVAGAHRAA DIVSSSLYMV VTGTDDLANT YFTTPFRRDY DLESYIEFVV QCASDFIKKL YGQGARRINI AGAPPIGCVP
301: SQRTNAGGLE RECVPLYNQA AVVFNTALEK EIKRLNGSEA LPGSVLKYID LYTPLLDMIQ RPDAYGFNVT NRGCCGTGVF EVTLTCNRYT AEPCRDPSKF
401: LFWDTYHLTE RGYNLLMAQI INRYGL
Best Arabidopsis Sequence Match ( AT1G75900.1 )
(BLAST)
001: MKDNSSWSCS CSWSSWKICL LSVLFLTETI TAVKLPPKLI IPAVIAFGDS IVDTGMNNNV KTVVKCDFLP YGINFQSGVA TGRFCDGRVP ADLLAEELGI
101: KSIVPAYLDP NLKSKDLLTG VSFASGGSGY DPITPKLVAV ISLEDQLSYF EEYIEKVKNI VGEARKDFIV ANSLFLLVAG SDDIANTYYT LRARPEYDVD
201: SYTTLMSDSA SEFVTKLYGY GVRRVAVFGA PPIGCVPSQR TLGGGILRDC ADNYNEAAKL FNSKLSPKLD SLRKTLPGIK PIYINIYDPL FDIIQNPANY
301: GFEVSNKGCC GTGAIEVAVL CNKITSSVCP DVSTHVFWDS YHPTEKTYKV LVSLLINKFV NQFV
Arabidopsis Description
EXL3GDSL esterase/lipase EXL3 [Source:UniProtKB/Swiss-Prot;Acc:Q94CH6]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.