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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • golgi 4
  • plasma membrane 4
  • endoplasmic reticulum 4
  • vacuole 4
  • nucleus 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:nucleus, plastid, secretory
BaCelLo:secretory
EpiLoc:nucleus
iPSORT:plastid
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI

Inferred distinct locusB in Crop

locusBlocations
Solyc02g071920.2.1
Solyc03g005980.2.1
Solyc03g096800.2.1
Solyc03g120880.2.1
Solyc09g059460.2.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G75880.1 Solyc03g120880.2.1 AT3G16310.1 21798944
AT1G75880.1 Solyc02g071920.2.1 AT4G19030.1 21798944
AT1G75880.1 Solyc03g005980.2.1 AT4G19030.1 21798944
AT1G75880.1 Solyc03g096800.2.1 AT5G24290.1 21798944
AT1G75880.1 Solyc09g059460.2.1 AT5G24290.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400070969 Potato extracellular 55.52 91.59
Solyc04g081770.2.1 Tomato cytosol 62.89 65.1
Solyc12g089350.1.1 Tomato extracellular, golgi 62.04 63.48
Solyc04g081760.2.1 Tomato extracellular 45.61 60.75
VIT_18s0001g14760.t01 Wine grape extracellular 43.63 55.2
VIT_18s0001g14790.t01 Wine grape endoplasmic reticulum, golgi 54.11 53.2
Solyc04g081780.2.1 Tomato extracellular 51.56 53.06
VIT_18s0001g14810.t01 Wine grape cytosol 51.27 52.31
Solyc04g081790.2.1 Tomato extracellular, plasma membrane 51.56 52.0
KRH51682 Soybean extracellular, golgi 53.54 51.92
KRH05980 Soybean endoplasmic reticulum, golgi 53.26 51.79
KRH17463 Soybean endoplasmic reticulum, golgi 53.26 51.79
KRH61020 Soybean endoplasmic reticulum, golgi, plastid 52.97 51.37
KRH61019 Soybean extracellular, plasma membrane 50.99 50.42
VIT_18s0001g14780.t01 Wine grape plasma membrane 47.88 50.3
KRH17461 Soybean nucleus 52.41 50.27
KRH05977 Soybean nucleus 52.69 50.0
VIT_18s0001g14800.t01 Wine grape extracellular, golgi 51.27 49.73
Bra015802.1-P Field mustard extracellular 50.99 49.72
CDX87651 Canola extracellular 50.99 49.72
Solyc04g081800.1.1 Tomato extracellular, plasma membrane 50.14 49.44
CDX73211 Canola extracellular 50.42 49.17
KRH17460 Soybean nucleus 50.42 49.17
KRH51681 Soybean extracellular, plasma membrane 49.58 49.02
KRH51683 Soybean plasma membrane 39.66 48.95
Bra015803.1-P Field mustard cytosol 47.88 48.84
Bra003736.1-P Field mustard extracellular, plasma membrane 49.29 48.07
CDX85929 Canola endoplasmic reticulum, plasma membrane 49.29 48.07
GSMUA_Achr11P... Banana endoplasmic reticulum, vacuole 45.04 48.04
AT1G75900.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 49.01 47.53
CDX68113 Canola endoplasmic reticulum, plasma membrane 48.73 47.51
CDX87652 Canola golgi, plasma membrane 48.44 47.11
CDX87653 Canola cytosol 40.79 47.06
KRH05976 Soybean nucleus 49.58 47.04
Bra015804.1-P Field mustard cytosol 40.51 46.73
CDX73210 Canola golgi, mitochondrion, plasma membrane 48.73 46.61
KRH17462 Soybean extracellular, plasma membrane, plastid 48.44 46.59
CDY42062 Canola cytosol 37.96 46.53
EER99270 Sorghum extracellular, plasma membrane 47.31 46.39
CDY20086 Canola extracellular, plasma membrane 45.61 46.13
GSMUA_Achr4P25550_001 Banana extracellular, golgi, vacuole 47.03 45.73
CDY32339 Canola extracellular, plasma membrane 45.33 45.58
GSMUA_Achr5P11240_001 Banana extracellular, golgi 46.46 45.43
KRH05978 Soybean plastid 48.44 45.36
Os10t0438600-01 Rice plasma membrane 45.61 44.97
GSMUA_Achr4P25560_001 Banana extracellular, golgi 46.74 44.96
CDY36116 Canola extracellular, plasma membrane 40.51 44.83
CDY51993 Canola plasma membrane 40.51 44.83
Zm00001d032888_P001 Maize mitochondrion 46.18 44.66
CDY70534 Canola plasma membrane 47.31 44.65
AT3G14820.1 Thale cress extracellular, plasma membrane 44.19 44.44
CDY65553 Canola extracellular 41.36 44.24
CDY69331 Canola cytosol 32.29 44.19
AT5G42170.1 Thale cress extracellular 46.18 44.17
CDY48852 Canola extracellular 40.79 44.17
CDX85928 Canola plasma membrane 46.74 44.12
Bra035295.1-P Field mustard mitochondrion 35.98 44.1
Os09t0540400-02 Rice extracellular, plasma membrane 45.61 43.99
Bra010987.1-P Field mustard plasma membrane 43.34 43.97
Bra027858.1-P Field mustard extracellular 43.34 43.84
Bra003737.1-P Field mustard cytosol, plastid 39.94 43.79
AT3G43550.1 Thale cress extracellular 35.69 43.75
AT1G75880.1 Thale cress golgi, plasma membrane 46.18 43.47
AT3G43570.1 Thale cress extracellular 39.38 43.44
CDY41727 Canola extracellular 39.94 43.25
CDY53577 Canola extracellular 39.94 43.25
CDY09420 Canola extracellular 39.09 43.12
CDY64565 Canola extracellular 39.09 43.12
HORVU1Hr1G036440.1 Barley endoplasmic reticulum, extracellular, plastid 45.33 43.01
Bra027859.1-P Field mustard extracellular 42.49 42.98
CDY53562 Canola extracellular 30.03 42.74
Os03t0859100-01 Rice golgi 44.19 42.74
AT1G58725.1 Thale cress extracellular 42.21 42.69
AT1G59030.1 Thale cress extracellular, plasma membrane 42.21 42.69
AT1G59406.1 Thale cress extracellular 42.21 42.69
CDY41728 Canola extracellular 39.38 42.64
Os02t0101400-01 Rice cytosol 33.99 42.55
TraesCS1A01G135900.1 Wheat plastid 44.76 42.47
AT1G58525.1 Thale cress extracellular 41.08 42.4
TraesCS1B01G156300.1 Wheat endoplasmic reticulum, plasma membrane, plastid 44.48 42.2
Bra026636.1-P Field mustard extracellular 41.64 42.12
TraesCS1D01G138700.1 Wheat endoplasmic reticulum, vacuole 44.48 42.09
HORVU6Hr1G001510.1 Barley endoplasmic reticulum, vacuole 45.89 42.08
AT1G20120.1 Thale cress plasma membrane 47.88 42.04
AT1G75890.3 Thale cress plastid 46.74 41.77
TraesCS7A01G339400.1 Wheat extracellular 41.36 41.71
TraesCS2A01G477400.1 Wheat golgi, vacuole 42.78 41.6
Bra027951.1-P Field mustard extracellular 41.08 41.55
CDY53576 Canola extracellular 39.38 41.49
AT1G20132.1 Thale cress extracellular, vacuole 44.76 41.25
GSMUA_Achr4P25720_001 Banana vacuole 42.21 41.16
TraesCS7B01G250800.1 Wheat extracellular 40.79 41.14
Bra012211.1-P Field mustard endoplasmic reticulum, plasma membrane 48.73 41.05
CDY57591 Canola endoplasmic reticulum, plasma membrane 48.73 41.05
TraesCS6A01G111000.1 Wheat extracellular, golgi 40.79 41.03
Zm00001d022615_P001 Maize mitochondrion, plasma membrane 47.59 40.98
Bra016475.1-P Field mustard plastid 43.91 40.9
CDY02386 Canola golgi 45.33 40.82
EER90469 Sorghum extracellular, vacuole 43.63 40.74
TraesCS6B01G139100.1 Wheat extracellular, golgi 40.51 40.74
Bra027950.1-P Field mustard extracellular 40.23 40.57
TraesCS7D01G347000.1 Wheat extracellular 40.23 40.57
TraesCS7B01G250700.1 Wheat extracellular, vacuole 40.51 40.51
CDY44206 Canola plasma membrane 43.63 40.31
Solyc09g030370.2.1 Tomato extracellular 40.23 40.23
TraesCS2B01G500500.1 Wheat mitochondrion 42.49 40.11
TraesCS2D01G476600.1 Wheat mitochondrion 42.49 40.11
TraesCS1A01G322600.1 Wheat mitochondrion 44.76 40.1
TraesCS1D01G322600.1 Wheat mitochondrion, plastid 44.76 40.1
CDY71031 Canola cytosol 11.33 40.0
HORVU7Hr1G083440.4 Barley extracellular 39.94 39.72
TraesCS4A01G316500.1 Wheat golgi 41.64 39.41
Solyc10g008820.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 39.94 39.39
TraesCS5D01G566800.1 Wheat endoplasmic reticulum, golgi 41.36 39.35
Solyc10g008810.2.1 Tomato extracellular 39.94 39.28
Solyc07g049440.2.1 Tomato extracellular 39.38 39.27
TraesCS4B01G010200.1 Wheat endoplasmic reticulum 41.08 39.19
TraesCS7D01G346700.1 Wheat extracellular 39.38 39.15
Os06t0351500-01 Rice endoplasmic reticulum, golgi, mitochondrion, plastid 41.93 39.15
TraesCS6D01G002800.1 Wheat mitochondrion 45.33 39.12
Zm00001d034917_P001 Maize mitochondrion 41.64 39.1
TraesCS5B01G562600.1 Wheat golgi, mitochondrion 41.08 39.08
EER97970 Sorghum plastid 42.21 38.8
HORVU7Hr1G083530.2 Barley golgi 41.64 38.79
TraesCS5A01G327300.1 Wheat cytosol 24.36 38.74
KXG38464 Sorghum cytosol 46.74 38.73
HORVU5Hr1G125000.1 Barley vacuole 40.51 38.54
Os10t0140300-01 Rice plasma membrane 37.96 38.4
TraesCS4A01G303600.1 Wheat cytosol 22.95 38.39
Zm00001d018791_P001 Maize plastid 42.21 38.3
TraesCS6B01G007700.1 Wheat plastid 45.33 38.28
Solyc05g043330.2.1 Tomato plasma membrane 38.53 38.1
EER88779 Sorghum extracellular, golgi, mitochondrion, plastid 41.08 38.06
TraesCS6B01G133500.1 Wheat extracellular 39.09 38.02
KXG34395 Sorghum plastid 42.21 38.01
TraesCS6D01G093000.1 Wheat extracellular, plasma membrane 39.38 37.98
Solyc07g049430.2.1 Tomato extracellular 37.96 37.96
TraesCS2B01G297300.1 Wheat plasma membrane 37.68 37.89
TraesCS2D01G278500.1 Wheat plasma membrane, vacuole 37.68 37.89
TraesCS6A01G104300.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 39.94 37.7
Solyc04g007440.1.1 Tomato extracellular, golgi, vacuole 38.53 37.67
TraesCS1B01G334900.1 Wheat plastid 45.33 37.65
TraesCS7D01G346900.1 Wheat endoplasmic reticulum, plasma membrane, plastid 25.21 37.08
TraesCS5B01G562700.1 Wheat golgi 39.94 36.81
HORVU2Hr1G107400.3 Barley mitochondrion 22.95 36.32
TraesCS4A01G316400.1 Wheat mitochondrion 39.66 36.18
CDY54336 Canola extracellular, golgi, plasma membrane 30.88 35.62
HORVU6Hr1G018750.1 Barley endoplasmic reticulum, plasma membrane 39.09 35.48
Solyc02g077340.1.1 Tomato golgi, plasma membrane, vacuole 37.11 35.03
Solyc12g010560.1.1 Tomato extracellular 32.29 34.97
HORVU2Hr1G068430.1 Barley endoplasmic reticulum, mitochondrion, plasma membrane 37.39 34.92
TraesCS5D01G566700.1 Wheat mitochondrion 39.66 34.74
Solyc02g077330.2.1 Tomato extracellular, golgi 35.13 34.44
TraesCS6A01G002700.1 Wheat mitochondrion 45.33 34.12
HORVU5Hr1G124980.2 Barley plastid 39.38 33.99
Solyc05g043320.1.1 Tomato cytosol 21.81 33.77
TraesCS7A01G339300.1 Wheat cytosol 26.06 33.7
Zm00001d014918_P001 Maize mitochondrion 45.04 33.54
OQU84135 Sorghum plasma membrane 45.33 30.65
VIT_18s0001g14770.t01 Wine grape plastid 52.41 29.46
CDY12974 Canola golgi, mitochondrion 45.04 29.39
CDY71376 Canola plastid 40.23 28.98
AT1G20130.1 Thale cress mitochondrion 42.49 28.09
CDY44205 Canola plasma membrane 37.96 24.28
Zm00001d014308_P001 Maize endoplasmic reticulum 37.11 20.06
Bra012212.1-P Field mustard plastid 40.23 17.95
KXG38704 Sorghum endoplasmic reticulum, plasma membrane 37.11 17.42
CDY29371 Canola plasma membrane 40.79 16.55
CDY67439 Canola plasma membrane 41.36 16.28
Bra025794.1-P Field mustard plasma membrane 40.51 16.07
Protein Annotations
EnsemblPlants:Solyc06g048670.2.1EnsemblPlantsGene:Solyc06g048670.2Gene3D:3.40.50.1110GO:GO:0003674GO:GO:0003824GO:GO:0016787
GO:GO:0016788InterPro:GDSLInterPro:IPR036514InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_likePANTHER:PTHR22835
PANTHER:PTHR22835:SF330PFAM:PF00657SignalP:SignalP-noTMSUPFAM:SSF52266UniParc:UPI000276655CUniProt:K4C5B3
MapMan:35.1:::::
Description
No Description!
Coordinates
chr6:-:31441105..31445069
Molecular Weight (calculated)
39604.5 Da
IEP (calculated)
5.911
GRAVY (calculated)
-0.039
Length
353 amino acids
Sequence
(BLAST)
001: MWYVVVCHVL LFSVWMSEAK VKLPEKVVVP AVYAFGDSIV DQGNNNYIAT TIKCNFPPYG KDLRDGIPTG RFSNAKTPPD LIAEELGIKG LIPAYLDPNL
101: KDEDLKTGVS FASGGCGYDP LTGSAFSILH LSDQLTLFQE YIEKLKRLVG KQETTHILNN SFYMVVAGSN DFLNNYYVTG FRKHQYDINS YIDHIVSWAS
201: NFVQELYELG ARRIGIMGLP PLGCVPFQRT LQGGIISRVC VDEYNQDAQL ANTKFAVAFG LLSKSLPQSK LVFIDIYNLV TDFIVNNTKY GFEEVDKGCC
301: GTGTIEVSTL CNKYSAICED DTKYLFWDSF HPTEKGYKVL IDHIFKTQMK NLL
Best Arabidopsis Sequence Match ( AT1G75900.1 )
(BLAST)
001: MKDNSSWSCS CSWSSWKICL LSVLFLTETI TAVKLPPKLI IPAVIAFGDS IVDTGMNNNV KTVVKCDFLP YGINFQSGVA TGRFCDGRVP ADLLAEELGI
101: KSIVPAYLDP NLKSKDLLTG VSFASGGSGY DPITPKLVAV ISLEDQLSYF EEYIEKVKNI VGEARKDFIV ANSLFLLVAG SDDIANTYYT LRARPEYDVD
201: SYTTLMSDSA SEFVTKLYGY GVRRVAVFGA PPIGCVPSQR TLGGGILRDC ADNYNEAAKL FNSKLSPKLD SLRKTLPGIK PIYINIYDPL FDIIQNPANY
301: GFEVSNKGCC GTGAIEVAVL CNKITSSVCP DVSTHVFWDS YHPTEKTYKV LVSLLINKFV NQFV
Arabidopsis Description
EXL3GDSL esterase/lipase EXL3 [Source:UniProtKB/Swiss-Prot;Acc:Q94CH6]
SUBAcon: [extracellular,plasma membrane,endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.