Factsheet for Solyc04g007440.1.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 6
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g010560.1.1	Tomato	extracellular	53.46	59.2
VIT_06s0004g07450.t01	Wine grape	extracellular	55.12	54.82
Solyc09g030370.2.1	Tomato	extracellular	51.8	52.97
KRH72763	Soybean	extracellular	52.35	51.92
AT1G58430.1	Thale cress	vacuole	48.48	48.61
CDY19082	Canola	endoplasmic reticulum, extracellular, vacuole	42.11	48.56
AT2G24560.1	Thale cress	extracellular, vacuole	48.75	48.48
Bra022848.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	44.32	48.48
Bra031550.1-P	Field mustard	cytosol, nucleus, peroxisome	43.77	48.32
KRH72761	Soybean	extracellular	47.65	48.31
Bra015541.1-P	Field mustard	extracellular	48.2	48.2
CDY10238	Canola	extracellular	47.92	47.92
AT2G30310.1	Thale cress	vacuole	47.65	47.91
CDX84777	Canola	extracellular, plasma membrane	38.5	47.77
AT2G30220.1	Thale cress	extracellular	47.37	47.77
AT2G31540.1	Thale cress	endoplasmic reticulum, extracellular	47.37	47.5
CDY23934	Canola	plastid	42.66	47.09
CDY34491	Canola	endoplasmic reticulum, extracellular, vacuole	46.81	46.94
GSMUA_Achr5P14310_001	Banana	extracellular, plasma membrane, vacuole	46.81	46.81
Bra021626.1-P	Field mustard	endoplasmic reticulum, extracellular	46.54	46.8
CDY29681	Canola	endoplasmic reticulum, extracellular, vacuole	45.98	46.24
Os01t0827700-00	Rice	plasma membrane	44.6	46.0
CDY09942	Canola	extracellular, plasma membrane	44.88	45.63
CDY10239	Canola	endoplasmic reticulum, extracellular	45.15	45.53
Bra015542.1-P	Field mustard	endoplasmic reticulum, extracellular	44.88	45.25
CDY06666	Canola	endoplasmic reticulum, extracellular	44.6	44.97
CDY59061	Canola	plasma membrane	44.88	44.88
CDY54004	Canola	endoplasmic reticulum, plasma membrane, vacuole	42.94	44.8
AT1G06990.1	Thale cress	extracellular, plasma membrane, vacuole	44.6	44.72
EES03823	Sorghum	plasma membrane	42.11	43.55
TraesCS3B01G380200.1	Wheat	plasma membrane	42.11	43.3
Solyc10g008810.2.1	Tomato	extracellular	42.11	42.34
Zm00001d012476_P001	Maize	plasma membrane	41.27	42.33
Bra021725.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	49.03	41.07
Solyc10g008820.2.1	Tomato	endoplasmic reticulum, extracellular, vacuole	40.44	40.78
Solyc12g089350.1.1	Tomato	extracellular, golgi	38.23	40.0
HORVU3Hr1G088120.3	Barley	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	41.55	39.68
Solyc04g081760.2.1	Tomato	extracellular	29.09	39.62
Bra018234.1-P	Field mustard	endoplasmic reticulum, vacuole	47.65	39.54
CDY10810	Canola	endoplasmic reticulum, vacuole	47.37	39.31
Solyc04g081790.2.1	Tomato	extracellular, plasma membrane	37.67	38.86
TraesCS3D01G341900.1	Wheat	mitochondrion, plasma membrane	42.94	38.75
Solyc04g081770.2.1	Tomato	cytosol	36.57	38.71
Solyc05g043330.2.1	Tomato	plasma membrane	38.23	38.66
Solyc06g048670.2.1	Tomato	extracellular	37.67	38.53
Solyc02g077340.1.1	Tomato	golgi, plasma membrane, vacuole	39.34	37.97
Solyc07g049430.2.1	Tomato	extracellular	36.84	37.68
Solyc07g049440.2.1	Tomato	extracellular	36.84	37.57
TraesCS3A01G348300.1	Wheat	mitochondrion	42.94	37.08
PGSC0003DMT400091356	Potato	cytosol, nucleus, plasma membrane	78.67	36.04
Solyc04g081800.1.1	Tomato	extracellular, plasma membrane	35.46	35.75
Solyc04g081780.2.1	Tomato	extracellular	32.41	34.11
Solyc05g043320.1.1	Tomato	cytosol	21.33	33.77
Solyc02g077330.2.1	Tomato	extracellular, golgi	32.41	32.5

Protein Annotations

EnsemblPlants:Solyc04g007440.1.1	EnsemblPlantsGene:Solyc04g007440.1	Gene3D:3.40.50.1110	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787
GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	PANTHER:PTHR22835
PANTHER:PTHR22835:SF152	PFAM:PF00657	SEG:seg	SignalP:SignalP-TM	SUPFAM:SSF52266	TMHMM:TMhelix
UniParc:UPI00027669B9	UniProt:K4BNQ1	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr4:+:1108529..1111896

Molecular Weight (calculated)

41287.8 Da

IEP (calculated)

8.005

GRAVY (calculated)

-0.183

Length

361 amino acids

Sequence
(BLAST)

001: MAPKVFSLLF FIFLFLALFL FNTIKTQSMP KFTSILVFGD STVDTGNNNY IFTLFKGNHI PYGKDYFNHV STGRFSNGKI VPDILANLLK LKKYGVPPYL
101: NPNLLENDYR SGVSFGSAGS GYDDLTSLIS GVISMRKQLE HFKEYLKKLN DFFGEKEKKR IVKGALVMVS SGSNDFIFNF YDVPTRRVEF SLEEYQDFLL
201: DKMQCFVKEL YELGCRNIIV NGLPPIGCLP IQMTAKSPLH RTCIEKENSD SQSYNKKLEE LLPHLQAQLR GSKIFYSDIY TPLSHLINNP HEYGFEETKR
301: GCCGSGLLET GPLCTKKSHV CSHTSQYVFF DSIHPTESAY YHISEYFMKE LLPKFSIIDN F

Best Arabidopsis Sequence Match ( AT1G58430.1 )
(BLAST)

001: MWTSKTISFT LFITTTLLGS CNASAKAKTQ PLFPAILIFG DSTVDTGNNN YPSQTIFRAK HVPYGIDLPN HSPNGRFSNG KIFSDIIATK LNIKQFVPPF
101: LQPNLTDQEI VTGVCFASAG AGYDDQTSLT TQAIRVSEQP NMFKSYIARL KSIVGDKKAM KIINNALVVV SAGPNDFILN YYEVPSWRRM YPSISDYQDF
201: VLSRLNNFVK ELYSLGCRKI LVGGLPPMGC LPIQMTAQFR NVLRFCLEQE NRDSVLYNQK LQKLLPQTQA SLTGSKILYS DVYDPMMEML QNPSKYGFKE
301: TTRGCCGTGF LETSFMCNAY SSMCQNRSEF LFFDSIHPSE ATYNYIGNVL DTKIRGWLKA

Arabidopsis Description

RXF26GDSL esterase/lipase At1g58430 [Source:UniProtKB/Swiss-Prot;Acc:Q9C648]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.