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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra021626.1-P Field mustard endoplasmic reticulum, extracellular 99.16 99.16
CDY54004 Canola endoplasmic reticulum, plasma membrane, vacuole 91.09 94.51
AT2G30310.1 Thale cress vacuole 86.63 86.63
AT2G30220.1 Thale cress extracellular 86.35 86.59
CDY19082 Canola endoplasmic reticulum, extracellular, vacuole 61.56 70.61
CDY34491 Canola endoplasmic reticulum, extracellular, vacuole 69.92 69.72
CDY23934 Canola plastid 62.95 69.11
CDX84777 Canola extracellular, plasma membrane 55.43 68.38
CDY10238 Canola extracellular 66.02 65.65
CDY10239 Canola endoplasmic reticulum, extracellular 64.35 64.53
CDY06666 Canola endoplasmic reticulum, extracellular 63.79 63.97
CDY10810 Canola endoplasmic reticulum, vacuole 70.47 58.16
VIT_06s0004g07450.t01 Wine grape extracellular 52.37 51.79
Solyc09g030370.2.1 Tomato extracellular 48.75 49.58
CDY09942 Canola extracellular, plasma membrane 48.47 49.01
KRH72763 Soybean extracellular 49.58 48.9
CDY59061 Canola plasma membrane 48.47 48.2
PGSC0003DMT400086168 Potato extracellular 42.34 47.95
Solyc04g007440.1.1 Tomato extracellular, golgi, vacuole 46.24 45.98
KRH72761 Soybean extracellular 45.13 45.51
GSMUA_Achr5P14310_001 Banana extracellular, plasma membrane, vacuole 45.13 44.88
EES03823 Sorghum plasma membrane 42.34 43.55
Os01t0827700-00 Rice plasma membrane 42.34 43.43
TraesCS3B01G380200.1 Wheat plasma membrane 42.34 43.3
Solyc12g010560.1.1 Tomato extracellular 38.72 42.64
CDY07069 Canola plasma membrane 42.06 42.06
CDY70930 Canola endoplasmic reticulum, vacuole 41.78 41.78
Zm00001d012476_P001 Maize plasma membrane 40.67 41.48
HORVU3Hr1G088120.3 Barley cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 41.78 39.68
CDY41727 Canola extracellular 35.65 39.26
CDY41728 Canola extracellular 35.65 39.26
CDY64565 Canola extracellular 34.82 39.06
CDY53577 Canola extracellular 35.38 38.96
CDY42062 Canola cytosol 31.2 38.89
CDY09420 Canola extracellular 34.54 38.75
TraesCS3D01G341900.1 Wheat mitochondrion, plasma membrane 42.62 38.25
CDY36116 Canola extracellular, plasma membrane 33.7 37.93
CDY53576 Canola extracellular 35.38 37.91
CDY51993 Canola plasma membrane 33.43 37.62
CDX87653 Canola cytosol 32.03 37.58
CDX73211 Canola extracellular 37.88 37.57
CDY48852 Canola extracellular 33.98 37.42
CDX87651 Canola extracellular 37.6 37.29
CDX85929 Canola endoplasmic reticulum, plasma membrane 37.6 37.29
CDY65553 Canola extracellular 33.98 36.97
TraesCS3A01G348300.1 Wheat mitochondrion 42.9 36.84
CDY69331 Canola cytosol 26.46 36.82
CDX68113 Canola endoplasmic reticulum, plasma membrane 37.05 36.74
CDX87748 Canola endoplasmic reticulum, golgi, vacuole 38.44 36.51
CDY55498 Canola extracellular, plasma membrane 35.1 36.0
CDY53653 Canola extracellular, plasma membrane 34.82 35.71
CDX89302 Canola extracellular 34.82 35.61
CDY15057 Canola extracellular 34.82 35.51
CDX93056 Canola extracellular 34.82 35.51
CDY29250 Canola extracellular 34.54 35.33
CDX85928 Canola plasma membrane 36.21 34.76
CDY70534 Canola plasma membrane 35.93 34.49
CDY32339 Canola extracellular, plasma membrane 33.43 34.19
CDY20086 Canola extracellular, plasma membrane 33.15 34.1
CDY71031 Canola cytosol 9.47 34.0
CDX87652 Canola golgi, plasma membrane 34.26 33.88
CDY44206 Canola plasma membrane 35.93 33.77
CDY50488 Canola endoplasmic reticulum, golgi, vacuole 31.48 33.43
CDX73210 Canola golgi, mitochondrion, plasma membrane 33.98 33.06
CDX87749 Canola extracellular 32.03 32.21
CDY50487 Canola extracellular 31.48 31.65
CDY02386 Canola golgi 34.26 31.38
CDY53562 Canola extracellular 21.45 31.05
CDY57591 Canola endoplasmic reticulum, plasma membrane 35.93 30.79
CDY54336 Canola extracellular, golgi, plasma membrane 25.63 30.07
CDY71376 Canola plastid 34.82 25.51
CDY12974 Canola golgi, mitochondrion 33.98 22.55
CDY44205 Canola plasma membrane 32.31 21.01
PGSC0003DMT400091356 Potato cytosol, nucleus, plasma membrane 42.34 19.29
CDY29371 Canola plasma membrane 35.1 14.48
CDY67439 Canola plasma membrane 35.1 14.05
Protein Annotations
EnsemblPlants:CDY29681EnsemblPlantsGene:GSBRNA2T00043450001Gene3D:3.40.50.1110GO:A0A078GW01GO:GO:0003674GO:GO:0003824
GO:GO:0016787GO:GO:0016788InterPro:GDSLInterPro:IPR036514InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_like
PANTHER:PTHR22835PANTHER:PTHR22835:SF152PFAM:PF00657ProteinID:CDY29681ProteinID:CDY29681.1SignalP:SignalP-noTM
SUPFAM:SSF52266UniParc:UPI0004EEB87FUniProt:A0A078GW01MapMan:35.1::
Description
BnaA04g17460DBnaA04g17460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GW01]
Coordinates
chrLK032241:-:286247..287513
Molecular Weight (calculated)
39818.1 Da
IEP (calculated)
8.513
GRAVY (calculated)
-0.087
Length
359 amino acids
Sequence
(BLAST)
001: MCMSKTIVLA LFVATLRASC NAVTNARPQP PFPAILIFGD STADTGNNNY HSQAVFKATH LPYGVDLPGH EANGRFSNGK LISDVIASKL NIKEFVPPFL
101: QPNISDQDIV TGVCFASAGA GYDDRTSLSS KAIPVSKQPS MFKDYIARLK GIVGDKKAME IINNALVVIS AGSNDFIWNF YDIPTRRLEY PDIYGYQEFV
201: LKRLDGFVRE LYSLGCRNIV VGGLPPMGCL PVQMTTKMRN VMRFCVEQEN TDSVLYNQKL VKKLPEIEAS LPGSKFLYAN VYDAVMDMIQ KPSKYGFKVT
301: KKGCCGTGYL ETGFMCNVIS KTCPNHSDHL FWDSIHPSEA AYKYLGNFVD AQIRGWLKT
Best Arabidopsis Sequence Match ( AT2G30310.1 )
(BLAST)
001: MSTSKTIVFG LFVATLLVSC NVAANATTQP LFPAILIFGD STVDTGNNNY HSQTIFKAKH LPYGVDLPGH EANGRYSNGK VISDVIASKL NIKELVPPFL
101: QPNISHQDIV TGVSFASAGA GYDDRSSLSS KAIPVSQQPS MFKNYIARLK GIVGDKKAME IINNALVVIS AGPNDFILNF YDIPTRRLEY PTIHGYQEFI
201: LKRLDGFVRE LYSLGCRNIV VGGLPPMGCL PIQMTAKMRN ILRFCVEQEN KDSVLYNQKL VKKLPEIQAS LPGSNFLYAN VYDPLMDMIQ NPSKYGFKET
301: KKGCCGTGYL ETTFMCNPLT KTCPNHSDHL FWDSIHPSEA AYNYIGNFVD AQIRGWIKA
Arabidopsis Description
GDSL esterase/lipase At2g30310 [Source:UniProtKB/Swiss-Prot;Acc:O22927]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.