Factsheet for VIT_06s0004g07450.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g007440.1.1	Tomato	extracellular, golgi, vacuole	54.82	55.12
Solyc09g030370.2.1	Tomato	extracellular	53.17	54.67
PGSC0003DMT400086168	Potato	extracellular	47.38	54.26
Bra015541.1-P	Field mustard	extracellular	53.17	53.46
AT2G30220.1	Thale cress	extracellular	52.62	53.35
AT2G30310.1	Thale cress	vacuole	52.34	52.92
CDY10238	Canola	extracellular	52.62	52.91
AT2G31540.1	Thale cress	endoplasmic reticulum, extracellular	52.34	52.78
Bra021626.1-P	Field mustard	endoplasmic reticulum, extracellular	52.07	52.65
CDY10239	Canola	endoplasmic reticulum, extracellular	51.79	52.51
CDY34491	Canola	endoplasmic reticulum, extracellular, vacuole	52.07	52.5
CDY29681	Canola	endoplasmic reticulum, extracellular, vacuole	51.79	52.37
Bra015542.1-P	Field mustard	endoplasmic reticulum, extracellular	51.24	51.96
KRH72763	Soybean	extracellular	52.07	51.92
Bra031550.1-P	Field mustard	cytosol, nucleus, peroxisome	46.56	51.68
CDY06666	Canola	endoplasmic reticulum, extracellular	50.96	51.68
CDY19082	Canola	endoplasmic reticulum, extracellular, vacuole	44.35	51.44
AT1G58430.1	Thale cress	vacuole	50.96	51.39
CDY54004	Canola	endoplasmic reticulum, plasma membrane, vacuole	48.21	50.58
AT2G24560.1	Thale cress	extracellular, vacuole	50.14	50.14
CDX84777	Canola	extracellular, plasma membrane	39.94	49.83
Bra022848.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	45.18	49.7
Solyc12g010560.1.1	Tomato	extracellular	44.35	49.39
GSMUA_Achr5P14310_001	Banana	extracellular, plasma membrane, vacuole	49.04	49.31
CDY23934	Canola	plastid	44.08	48.93
CDY09942	Canola	extracellular, plasma membrane	47.38	48.45
AT1G06990.1	Thale cress	extracellular, plasma membrane, vacuole	47.11	47.5
Os01t0827700-00	Rice	plasma membrane	45.73	47.43
CDY59061	Canola	plasma membrane	47.11	47.37
EES03823	Sorghum	plasma membrane	45.45	47.28
Zm00001d012476_P001	Maize	plasma membrane	45.73	47.16
TraesCS3B01G380200.1	Wheat	plasma membrane	44.63	46.15
KRH72761	Soybean	extracellular	44.9	45.79
Bra018234.1-P	Field mustard	endoplasmic reticulum, vacuole	52.89	44.14
Bra021725.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	52.34	44.08
CDY10810	Canola	endoplasmic reticulum, vacuole	52.62	43.91
HORVU3Hr1G088120.3	Barley	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	43.8	42.06
VIT_18s0001g14810.t01	Wine grape	cytosol	38.84	40.75
TraesCS3D01G341900.1	Wheat	mitochondrion, plasma membrane	44.9	40.75
VIT_18s0001g14790.t01	Wine grape	endoplasmic reticulum, golgi	39.39	39.83
VIT_18s0001g14760.t01	Wine grape	extracellular	30.3	39.43
TraesCS3A01G348300.1	Wheat	mitochondrion	45.18	39.23
VIT_10s0003g00600.t01	Wine grape	extracellular, vacuole	38.57	38.25
VIT_18s0001g14800.t01	Wine grape	extracellular, golgi	38.02	37.91
VIT_18s0001g14780.t01	Wine grape	plasma membrane	34.99	37.8
VIT_19s0090g01160.t01	Wine grape	extracellular, golgi	35.26	37.21
VIT_10s0003g00620.t01	Wine grape	mitochondrion	37.19	32.37
PGSC0003DMT400091356	Potato	cytosol, nucleus, plasma membrane	47.93	22.08
VIT_18s0001g14770.t01	Wine grape	plastid	37.47	21.66
VIT_12s0059g01590.t01	Wine grape	extracellular	36.36	20.06

Protein Annotations

Gene3D:3.40.50.1110	MapMan:35.1	EMBL:AM450229	ProteinID:CAN59817	ProteinID:CAN59817.1	ProteinID:CCB43436
ProteinID:CCB43436.1	UniProt:F6GUI2	EMBL:FN594951	InterPro:GDSL	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	GO:GO:0016788	InterPro:IPR036514	PFAM:PF00657	PANTHER:PTHR22835	PANTHER:PTHR22835:SF152
InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	SUPFAM:SSF52266	SignalP:SignalP-noTM	UniParc:UPI00015C7532	ArrayExpress:VIT_06s0004g07450
EnsemblPlantsGene:VIT_06s0004g07450	EnsemblPlants:VIT_06s0004g07450.t01	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6:-:8249119..8250415

Molecular Weight (calculated)

40024.2 Da

IEP (calculated)

5.771

GRAVY (calculated)

-0.084

Length

363 amino acids

Sequence
(BLAST)

001: MAISANTLFL LSLACSTTIH ICNAQINITF TAVLIFGDST MDTGNNNYVN TPFKGNHIPY GQDFPGKVPT GRFSDGKLVP DMVASLLKIK ETVPPFLDPK
101: ITDNELKTGV TFASAASGYD DLTSVLSQAI PVSKQPKMFK KYIERLKGVV GELEAMRIVN GALVVVSSGT NDFCFNFYDV PSRRIEFSSN GYQDFLLKKV
201: EDLLKKLYNL GGRTMVIAGL PPMGCLPIQM STRFELPGIF RVCLEDQNSD AQSYNSKLEK LLPQIQNSLP GSKILYVDIY TPLDDMINNP EKYGFVETKR
301: GCCGTGLVEA GPLCNSLTPV CENASQYVFW DSIHPTEAAY RVLVEYLEKD LSTKIHNSVG EKN

Best Arabidopsis Sequence Match ( AT2G31540.1 )
(BLAST)

001: MSTSKAITLT LFIATTLLAP CNAAANATTK PLFPAILIFG DSTVDTGNNN YPLPTIFRAE HFPYGMDLPD GKANGRFSNG KLISDIIATK LNIKEFIPPF
101: LQPNLSDQDI LTGVCFASAG AGYDDLTSLS TQAIRVSEQP NMFKSYIARL KGIVGDKKAM EIINNAFVVV SAGPNDFILN YYEIPSRRLE YPFISGYQDF
201: ILKRLENFVR ELYSLGVRNV LVGGLPPMGC LPIHMTAKFR NIFRFCLEHH NKDSVLYNEK LQNLLPQIEA SLPGSKFLYA DVYNPMMEMI QNPSKYGFKE
301: TKRGCCGTGF LETSFMCNVF SPVCQNRSEF LFFDSIHPSE ATYNVIGNLL DPLIRGKFQA

Arabidopsis Description

GDSL esterase/lipase At2g31540 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIQ3]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.