Factsheet for VIT_10s0003g00600.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400068453	Potato	cytosol	57.65	61.16
KRH10964	Soybean	endoplasmic reticulum, plasma membrane	59.29	59.29
KRH21336	Soybean	extracellular	59.02	59.02
KRH20355	Soybean	extracellular, plasma membrane	58.74	58.27
Solyc10g008810.2.1	Tomato	extracellular	57.1	58.22
KRH50140	Soybean	extracellular, golgi, plasma membrane	57.1	56.79
AT5G45960.1	Thale cress	endoplasmic reticulum, golgi, vacuole	57.38	56.0
CDX87748	Canola	endoplasmic reticulum, golgi, vacuole	57.1	55.29
Bra022003.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	56.83	54.88
Solyc10g008820.2.1	Tomato	endoplasmic reticulum, extracellular, vacuole	50.82	51.96
CDY50488	Canola	endoplasmic reticulum, golgi, vacuole	46.45	50.3
VIT_18s0001g14810.t01	Wine grape	cytosol	38.8	41.04
VIT_18s0001g14760.t01	Wine grape	extracellular	31.15	40.86
VIT_18s0001g14790.t01	Wine grape	endoplasmic reticulum, golgi	39.34	40.11
VIT_18s0001g14800.t01	Wine grape	extracellular, golgi	39.89	40.11
VIT_19s0090g01160.t01	Wine grape	extracellular, golgi	36.89	39.24
VIT_18s0001g14780.t01	Wine grape	plasma membrane	35.79	38.99
VIT_06s0004g07450.t01	Wine grape	extracellular	38.25	38.57
VIT_10s0003g00620.t01	Wine grape	mitochondrion	37.7	33.09
VIT_18s0001g14770.t01	Wine grape	plastid	39.89	23.25
VIT_12s0059g01590.t01	Wine grape	extracellular	37.16	20.67

Protein Annotations

EntrezGene:100252058	wikigene:100252058	Gene3D:3.40.50.1110	MapMan:35.1	ProteinID:CBI30638	ProteinID:CBI30638.3
UniProt:D7TJG6	EMBL:FN595992	InterPro:GDSL	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787
GO:GO:0016788	InterPro:IPR036514	EntrezGene:LOC100252058	wikigene:LOC100252058	PFAM:PF00657	PANTHER:PTHR22835
PANTHER:PTHR22835:SF261	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	SUPFAM:SSF52266	SignalP:SignalP-noTM	UniParc:UPI0001984110
ArrayExpress:VIT_10s0003g00600	EnsemblPlantsGene:VIT_10s0003g00600	EnsemblPlants:VIT_10s0003g00600.t01	RefSeq:XP_002273045	RefSeq:XP_002273045.2	SEG:seg

Description

No Description!

Coordinates

chr10:+:1838202..1840711

Molecular Weight (calculated)

41327.8 Da

IEP (calculated)

8.245

GRAVY (calculated)

-0.085

Length

366 amino acids

Sequence
(BLAST)

001: MKSNVCRHSV SLLLLFLSAF FFPRAEALTK QRGSNLSVSA VLVFGDSTVD PGNNNYIQTP FRSNFPPYGR EFENQEATGR YTDGRLATDF IVSYVGLKEY
101: VPPYLDPTLS LEELMTGVSF ASGGSGFDPL TPRISNTIEI PKQVEYFKEY RKRLELAIGK ERTDNLIKKA IFVISAGTND LVVNYFTLPV RRKSYTISGY
201: QHFLMQHVEQ LIQSLWDQGA RRIAFVGMPP IGCLPMVITL NSDNAFLQRG CIEELSLVAK DYNLKLQNKL KAIHKNLAHL GGKIFYVDIY GPVTNMIRGY
301: DKFGFEEVAN GCCGSGIIEV SFLCNPNSYV CPDASKYIFW DSIHPTEKTY YIVFKTLRHI IDMISN

Best Arabidopsis Sequence Match ( AT5G45960.1 )
(BLAST)

001: MRSHHRHFSS YVSFILFLFL FFISFSSSTS KLEPAKSEPK RKHSVSAILV FGDSTVDPGN NNYIDTVFKC NFPPYGLDFR NKTPTGRFCN GRLVTDFIAS
101: YIGVKENVPP YLDPNLGINE LISGVSFASA GSGYDPLTPT ITNVIDIPTQ LEYFREYKRK LEGKMGKQEM EKHIEEAMFC VSAGTNDFVI NYFTIPIRRK
201: TFTIEAYQQF VISNLKQFIQ GLWKEGARKI TVAGLPPIGC LPIVITLFSG EALTNRRCID RFSTVATNYN FLLQKQLALM QVGLAHLGSK IFYLDVYNPV
301: YEVIRDPRKF GFEEVFSGCC GSGYLEASFL CNPKSYVCPN TSAYVFFDSI HPSEKTYFSL FRSLRPIYDS ILGSF

Arabidopsis Description

GDSL esterase/lipase At5g45960 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ40]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.