Factsheet for Bra022003.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 6
plasma membrane 6
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87748	Canola	endoplasmic reticulum, golgi, vacuole	98.68	98.94
CDY50488	Canola	endoplasmic reticulum, golgi, vacuole	84.43	94.67
AT5G45960.1	Thale cress	endoplasmic reticulum, golgi, vacuole	82.59	83.47
VIT_10s0003g00600.t01	Wine grape	extracellular, vacuole	54.88	56.83
KRH20355	Soybean	extracellular, plasma membrane	52.77	54.2
KRH10964	Soybean	endoplasmic reticulum, plasma membrane	52.24	54.1
KRH50140	Soybean	extracellular, golgi, plasma membrane	52.51	54.08
KRH21336	Soybean	extracellular	51.98	53.83
PGSC0003DMT400068453	Potato	cytosol	47.76	52.46
Solyc10g008810.2.1	Tomato	extracellular	49.08	51.81
Solyc10g008820.2.1	Tomato	endoplasmic reticulum, extracellular, vacuole	45.12	47.77
Bra031550.1-P	Field mustard	cytosol, nucleus, peroxisome	37.2	43.12
Bra015541.1-P	Field mustard	extracellular	38.79	40.72
Bra017022.1-P	Field mustard	plasma membrane	37.99	40.11
Bra015542.1-P	Field mustard	endoplasmic reticulum, extracellular	37.73	39.94
Bra004974.1-P	Field mustard	endoplasmic reticulum, vacuole	37.47	39.55
Bra015803.1-P	Field mustard	cytosol	35.62	39.02
Bra021626.1-P	Field mustard	endoplasmic reticulum, extracellular	36.41	38.44
Bra004735.1-P	Field mustard	extracellular	34.04	38.28
Bra022848.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	33.25	38.18
Bra022002.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	34.56	37.97
Bra015802.1-P	Field mustard	extracellular	36.15	37.85
Bra015804.1-P	Field mustard	cytosol	30.34	37.58
Bra013200.1-P	Field mustard	extracellular	34.83	37.5
Bra003736.1-P	Field mustard	extracellular, plasma membrane	35.36	37.02
Bra026402.1-P	Field mustard	extracellular	33.51	36.18
Bra027858.1-P	Field mustard	extracellular	32.45	35.24
Bra027859.1-P	Field mustard	extracellular	32.45	35.24
Bra010987.1-P	Field mustard	plasma membrane	31.93	34.77
Bra018234.1-P	Field mustard	endoplasmic reticulum, vacuole	39.84	34.71
Bra003737.1-P	Field mustard	cytosol, plastid	29.02	34.16
Bra026636.1-P	Field mustard	extracellular	31.4	34.1
Bra035295.1-P	Field mustard	mitochondrion	25.59	33.68
Bra016475.1-P	Field mustard	plastid	33.51	33.51
Bra021725.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	37.99	33.41
Bra027951.1-P	Field mustard	extracellular	30.61	33.24
Bra027950.1-P	Field mustard	extracellular	30.61	33.14
Bra012211.1-P	Field mustard	endoplasmic reticulum, plasma membrane	35.36	31.98
Bra012212.1-P	Field mustard	plastid	30.61	14.66
Bra025794.1-P	Field mustard	plasma membrane	33.25	14.16

Protein Annotations

EnsemblPlants:Bra022003.1	EnsemblPlants:Bra022003.1-P	EnsemblPlantsGene:Bra022003	Gene3D:3.40.50.1110	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like
PANTHER:PTHR22835	PANTHER:PTHR22835:SF261	PFAM:PF00657	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52266
TMHMM:TMhelix	UniParc:UPI0002545B71	UniProt:M4DZQ6	MapMan:35.1	:	:

Description

AT5G45960 (E=7e-165) | GDSL-motif lipase/hydrolase family protein

Coordinates

chrA02:-:18398936..18403166

Molecular Weight (calculated)

42957.7 Da

IEP (calculated)

7.963

GRAVY (calculated)

0.029

Length

379 amino acids

Sequence
(BLAST)

001: MRSHHTHSSF SLSFIFLFLF FNIFSLSTPK LEPLKPSPLG SYHQRKQPVS AILVFGDSTV DPGNNNYIET AFKCNFPPYG LDFKNSIPTG RFCNGRLVTD
101: FIGSYIGVKE FVPAYLDPNL GINDLMSGVS FASAGSGFDP LTPTIGNVID IPTQLEHFRE YKRKLESKIG KQNMEKHIKE AIFCVSAGTN DFVINYFTIP
201: IRRKSFTIEA YQHFVTYNLK QFIQDLWHEG ARIITVAGLP PIGCLPIVIT VFSGEPLTNR RCIDRFSTVA INYNFYLQKE LDLMQTSLAH LGSKIFYLDV
301: YNPVYEIILD HRRFGFEEVS RGCCGIGYLE ASVLCNPKSY VCPNTSAYVF FDSIHPSEKT YFILFKALRP IIDSFLGSF

Best Arabidopsis Sequence Match ( AT5G45960.1 )
(BLAST)

001: MRSHHRHFSS YVSFILFLFL FFISFSSSTS KLEPAKSEPK RKHSVSAILV FGDSTVDPGN NNYIDTVFKC NFPPYGLDFR NKTPTGRFCN GRLVTDFIAS
101: YIGVKENVPP YLDPNLGINE LISGVSFASA GSGYDPLTPT ITNVIDIPTQ LEYFREYKRK LEGKMGKQEM EKHIEEAMFC VSAGTNDFVI NYFTIPIRRK
201: TFTIEAYQQF VISNLKQFIQ GLWKEGARKI TVAGLPPIGC LPIVITLFSG EALTNRRCID RFSTVATNYN FLLQKQLALM QVGLAHLGSK IFYLDVYNPV
301: YEVIRDPRKF GFEEVFSGCC GSGYLEASFL CNPKSYVCPN TSAYVFFDSI HPSEKTYFSL FRSLRPIYDS ILGSF

Arabidopsis Description

GDSL esterase/lipase At5g45960 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ40]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.