Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 6
- golgi 6
- extracellular 5
- plastid 1
- vacuole 5
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022003.1-P | Field mustard | endoplasmic reticulum, golgi, vacuole | 83.47 | 82.59 |
| CDX87748 | Canola | endoplasmic reticulum, golgi, vacuole | 82.67 | 82.01 |
| CDY50488 | Canola | endoplasmic reticulum, golgi, vacuole | 69.87 | 77.51 |
| VIT_10s0003g00600.t01 | Wine grape | extracellular, vacuole | 56.0 | 57.38 |
| KRH10964 | Soybean | endoplasmic reticulum, plasma membrane | 54.13 | 55.46 |
| KRH20355 | Soybean | extracellular, plasma membrane | 54.13 | 55.01 |
| KRH50140 | Soybean | extracellular, golgi, plasma membrane | 53.87 | 54.89 |
| KRH21336 | Soybean | extracellular | 53.33 | 54.64 |
| PGSC0003DMT400068453 | Potato | cytosol | 48.8 | 53.04 |
| Solyc10g008810.2.1 | Tomato | extracellular | 50.13 | 52.37 |
| Solyc10g008820.2.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 46.13 | 48.32 |
| AT1G58430.1 | Thale cress | vacuole | 40.0 | 41.67 |
| AT2G30220.1 | Thale cress | extracellular | 39.2 | 41.06 |
| AT2G31540.1 | Thale cress | endoplasmic reticulum, extracellular | 39.2 | 40.83 |
| AT1G06990.1 | Thale cress | extracellular, plasma membrane, vacuole | 38.67 | 40.28 |
| AT2G24560.1 | Thale cress | extracellular, vacuole | 38.93 | 40.22 |
| AT2G30310.1 | Thale cress | vacuole | 37.33 | 39.0 |
| AT2G40250.1 | Thale cress | vacuole | 37.33 | 38.78 |
| AT5G45950.1 | Thale cress | extracellular, plasma membrane | 36.8 | 38.66 |
| AT2G04570.1 | Thale cress | extracellular | 35.47 | 38.0 |
| AT3G43570.1 | Thale cress | extracellular | 32.0 | 37.5 |
| AT1G75900.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 36.0 | 37.09 |
| AT1G59406.1 | Thale cress | extracellular | 33.87 | 36.39 |
| AT1G59030.1 | Thale cress | extracellular, plasma membrane | 33.87 | 36.39 |
| AT1G58725.1 | Thale cress | extracellular | 33.87 | 36.39 |
| AT2G42990.1 | Thale cress | extracellular | 33.87 | 36.29 |
| AT4G26790.1 | Thale cress | extracellular, golgi | 33.87 | 36.18 |
| AT1G75880.1 | Thale cress | golgi, plasma membrane | 36.0 | 36.0 |
| AT1G58525.1 | Thale cress | extracellular | 32.8 | 35.96 |
| AT3G14820.1 | Thale cress | extracellular, plasma membrane | 33.33 | 35.61 |
| AT3G43550.1 | Thale cress | extracellular | 26.93 | 35.07 |
| AT1G75890.3 | Thale cress | plastid | 36.8 | 34.94 |
| AT5G42170.1 | Thale cress | extracellular | 34.13 | 34.69 |
| AT1G20120.1 | Thale cress | plasma membrane | 37.07 | 34.58 |
| AT1G20132.1 | Thale cress | extracellular, vacuole | 34.67 | 33.94 |
| AT1G20130.1 | Thale cress | mitochondrion | 32.0 | 22.47 |
Protein Annotations
| Gene3D:3.40.50.1110 | MapMan:35.1 | EntrezGene:834636 | ProteinID:AED95320.1 | ArrayExpress:AT5G45960 | EnsemblPlantsGene:AT5G45960 |
| RefSeq:AT5G45960 | TAIR:AT5G45960 | RefSeq:AT5G45960-TAIR-G | EnsemblPlants:AT5G45960.1 | TAIR:AT5G45960.1 | EMBL:AY084721 |
| Unigene:At.29984 | ProteinID:BAB09324.1 | InterPro:GDSL | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005576 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0016042 |
| GO:GO:0016787 | GO:GO:0016788 | InterPro:IPR036514 | RefSeq:NP_199408.1 | PFAM:PF00657 | PO:PO:0000037 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009052 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR22835 | PANTHER:PTHR22835:SF261 |
| UniProt:Q9FJ40 | InterPro:SGNH_hydro_sf | InterPro:SGNH_plant_lipase_like | SUPFAM:SSF52266 | SignalP:SignalP-noTM | TMHMM:TMhelix |
| UniParc:UPI0000048C17 | SEG:seg | : | : | : | : |
Description
GDSL esterase/lipase At5g45960 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ40]
Coordinates
chr5:-:18636928..18640401
Molecular Weight (calculated)
42484.1 Da
IEP (calculated)
8.576
GRAVY (calculated)
-0.040
Length
375 amino acids
Sequence
(BLAST)
(BLAST)
001: MRSHHRHFSS YVSFILFLFL FFISFSSSTS KLEPAKSEPK RKHSVSAILV FGDSTVDPGN NNYIDTVFKC NFPPYGLDFR NKTPTGRFCN GRLVTDFIAS
101: YIGVKENVPP YLDPNLGINE LISGVSFASA GSGYDPLTPT ITNVIDIPTQ LEYFREYKRK LEGKMGKQEM EKHIEEAMFC VSAGTNDFVI NYFTIPIRRK
201: TFTIEAYQQF VISNLKQFIQ GLWKEGARKI TVAGLPPIGC LPIVITLFSG EALTNRRCID RFSTVATNYN FLLQKQLALM QVGLAHLGSK IFYLDVYNPV
301: YEVIRDPRKF GFEEVFSGCC GSGYLEASFL CNPKSYVCPN TSAYVFFDSI HPSEKTYFSL FRSLRPIYDS ILGSF
101: YIGVKENVPP YLDPNLGINE LISGVSFASA GSGYDPLTPT ITNVIDIPTQ LEYFREYKRK LEGKMGKQEM EKHIEEAMFC VSAGTNDFVI NYFTIPIRRK
201: TFTIEAYQQF VISNLKQFIQ GLWKEGARKI TVAGLPPIGC LPIVITLFSG EALTNRRCID RFSTVATNYN FLLQKQLALM QVGLAHLGSK IFYLDVYNPV
301: YEVIRDPRKF GFEEVFSGCC GSGYLEASFL CNPKSYVCPN TSAYVFFDSI HPSEKTYFSL FRSLRPIYDS ILGSF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.