Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031550.1-P | Field mustard | cytosol, nucleus, peroxisome | 76.94 | 84.71 |
| CDY09942 | Canola | extracellular, plasma membrane | 82.22 | 83.38 |
| CDY59061 | Canola | plasma membrane | 82.78 | 82.55 |
| AT1G58430.1 | Thale cress | vacuole | 49.44 | 49.44 |
| AT2G24560.1 | Thale cress | extracellular, vacuole | 49.17 | 48.76 |
| AT2G30310.1 | Thale cress | vacuole | 48.06 | 48.19 |
| Solyc09g030370.2.1 | Tomato | extracellular | 47.22 | 48.16 |
| AT2G30220.1 | Thale cress | extracellular | 47.78 | 48.04 |
| AT2G31540.1 | Thale cress | endoplasmic reticulum, extracellular | 47.78 | 47.78 |
| VIT_06s0004g07450.t01 | Wine grape | extracellular | 47.5 | 47.11 |
| KRH72763 | Soybean | extracellular | 46.94 | 46.43 |
| PGSC0003DMT400086168 | Potato | extracellular | 40.83 | 46.37 |
| GSMUA_Achr5P14310_001 | Banana | extracellular, plasma membrane, vacuole | 45.28 | 45.15 |
| Solyc04g007440.1.1 | Tomato | extracellular, golgi, vacuole | 44.72 | 44.6 |
| EES03823 | Sorghum | plasma membrane | 41.94 | 43.27 |
| Zm00001d012476_P001 | Maize | plasma membrane | 41.39 | 42.33 |
| Os01t0827700-00 | Rice | plasma membrane | 40.83 | 42.0 |
| TraesCS3B01G380200.1 | Wheat | plasma membrane | 40.56 | 41.6 |
| AT2G40250.1 | Thale cress | vacuole | 40.83 | 40.72 |
| KRH72761 | Soybean | extracellular | 39.72 | 40.17 |
| Solyc12g010560.1.1 | Tomato | extracellular | 36.11 | 39.88 |
| HORVU3Hr1G088120.3 | Barley | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 41.39 | 39.42 |
| AT5G45960.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 40.28 | 38.67 |
| AT3G43570.1 | Thale cress | extracellular | 33.89 | 38.12 |
| AT2G42990.1 | Thale cress | extracellular | 36.94 | 38.0 |
| TraesCS3D01G341900.1 | Wheat | mitochondrion, plasma membrane | 41.39 | 37.25 |
| AT1G59406.1 | Thale cress | extracellular | 35.83 | 36.96 |
| AT1G59030.1 | Thale cress | extracellular, plasma membrane | 35.83 | 36.96 |
| AT1G58725.1 | Thale cress | extracellular | 35.83 | 36.96 |
| AT3G43550.1 | Thale cress | extracellular | 29.44 | 36.81 |
| AT3G14820.1 | Thale cress | extracellular, plasma membrane | 35.83 | 36.75 |
| AT1G20120.1 | Thale cress | plasma membrane | 40.83 | 36.57 |
| AT1G58525.1 | Thale cress | extracellular | 34.72 | 36.55 |
| TraesCS3A01G348300.1 | Wheat | mitochondrion | 41.39 | 35.65 |
| AT1G20132.1 | Thale cress | extracellular, vacuole | 37.5 | 35.25 |
| AT4G26790.1 | Thale cress | extracellular, golgi | 33.89 | 34.76 |
| AT5G42170.1 | Thale cress | extracellular | 35.56 | 34.69 |
| AT1G75900.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 34.72 | 34.34 |
| AT2G04570.1 | Thale cress | extracellular | 33.06 | 34.0 |
| AT5G45950.1 | Thale cress | extracellular, plasma membrane | 33.61 | 33.89 |
| AT1G75880.1 | Thale cress | golgi, plasma membrane | 35.0 | 33.6 |
| AT1G75890.3 | Thale cress | plastid | 35.56 | 32.41 |
| AT1G20130.1 | Thale cress | mitochondrion | 36.39 | 24.53 |
| PGSC0003DMT400091356 | Potato | cytosol, nucleus, plasma membrane | 39.44 | 18.02 |
Protein Annotations
| Gene3D:3.40.50.1110 | MapMan:35.1 | EntrezGene:837209 | ProteinID:AAF82220.1 | ProteinID:AEE28063.1 | ArrayExpress:AT1G06990 |
| EnsemblPlantsGene:AT1G06990 | RefSeq:AT1G06990 | TAIR:AT1G06990 | RefSeq:AT1G06990-TAIR-G | EnsemblPlants:AT1G06990.1 | TAIR:AT1G06990.1 |
| EMBL:AY086055 | Unigene:At.42318 | InterPro:GDSL | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005576 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0016042 |
| GO:GO:0016787 | GO:GO:0016788 | InterPro:IPR036514 | RefSeq:NP_563774.1 | PFAM:PF00657 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0025022 | PANTHER:PTHR22835 |
| PANTHER:PTHR22835:SF152 | UniProt:Q9LMJ3 | InterPro:SGNH_hydro_sf | InterPro:SGNH_plant_lipase_like | SUPFAM:SSF52266 | SignalP:SignalP-noTM |
| UniParc:UPI0000162C99 | : | : | : | : | : |
Description
GDSL esterase/lipase At1g06990 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMJ3]
Coordinates
chr1:+:2148342..2150152
Molecular Weight (calculated)
39984.0 Da
IEP (calculated)
5.322
GRAVY (calculated)
0.009
Length
360 amino acids
Sequence
(BLAST)
(BLAST)
001: MLIHVIIFMI ITTMQFSTTC HAYVINVTNV NVSMFPAILV FGDSTIDTGN NNYIKTYIRA NFPPYGCNFP GHNATGRFSN GKLIPDFIAS LMGIKDTVPP
101: FLDPHLSDSD IITGVCFASA GSGYDNLTDR ATSTLSVDKQ ADMLRSYVER LSQIVGDEKA ASIVSEALVI VSSGTNDFNL NLYDTPSRRQ KLGVDGYQSF
201: ILSNVHNFVQ ELYDIGCRKI MVLGLPPVGC LPIQMTMAMQ KQNERRCIDK QNSDSQEFNQ KLKNSLTEMQ SNLTGSVIFY GDIYGALFDM ATNPQRYGLK
301: ETTRGCCGTG EIELAYLCNA LTRICPNPNQ YLFWDDIHPS QIAYIVISLS LVEQIFHVLS
101: FLDPHLSDSD IITGVCFASA GSGYDNLTDR ATSTLSVDKQ ADMLRSYVER LSQIVGDEKA ASIVSEALVI VSSGTNDFNL NLYDTPSRRQ KLGVDGYQSF
201: ILSNVHNFVQ ELYDIGCRKI MVLGLPPVGC LPIQMTMAMQ KQNERRCIDK QNSDSQEFNQ KLKNSLTEMQ SNLTGSVIFY GDIYGALFDM ATNPQRYGLK
301: ETTRGCCGTG EIELAYLCNA LTRICPNPNQ YLFWDDIHPS QIAYIVISLS LVEQIFHVLS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.