Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 3
- golgi 2
- plasma membrane 3
- endoplasmic reticulum 2
- vacuole 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71376 | Canola | plastid | 63.11 | 68.78 |
| CDY44205 | Canola | plasma membrane | 66.67 | 64.49 |
| AT1G20132.1 | Thale cress | extracellular, vacuole | 41.57 | 57.96 |
| AT1G20120.1 | Thale cress | plasma membrane | 37.64 | 50.0 |
| VIT_18s0001g14760.t01 | Wine grape | extracellular | 24.53 | 46.95 |
| AT1G75900.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 29.96 | 43.96 |
| VIT_18s0001g14810.t01 | Wine grape | cytosol | 28.46 | 43.93 |
| VIT_18s0001g14780.t01 | Wine grape | plasma membrane | 27.53 | 43.75 |
| PGSC0003DMT400070969 | Potato | extracellular | 17.42 | 43.46 |
| VIT_18s0001g14800.t01 | Wine grape | extracellular, golgi | 29.59 | 43.41 |
| PGSC0003DMT400075642 | Potato | extracellular | 29.21 | 43.33 |
| VIT_18s0001g14790.t01 | Wine grape | endoplasmic reticulum, golgi | 28.84 | 42.9 |
| AT3G43570.1 | Thale cress | extracellular | 25.66 | 42.81 |
| AT3G43550.1 | Thale cress | extracellular | 23.03 | 42.71 |
| Solyc12g089350.1.1 | Tomato | extracellular, golgi | 27.53 | 42.61 |
| KRH51682 | Soybean | extracellular, golgi | 29.03 | 42.58 |
| Solyc06g048670.2.1 | Tomato | extracellular | 28.09 | 42.49 |
| AT1G75880.1 | Thale cress | golgi, plasma membrane | 29.78 | 42.4 |
| KRH61020 | Soybean | endoplasmic reticulum, golgi, plastid | 28.84 | 42.31 |
| Solyc04g081770.2.1 | Tomato | cytosol | 26.97 | 42.23 |
| AT1G58525.1 | Thale cress | extracellular | 26.97 | 42.11 |
| CDY29371 | Canola | plasma membrane | 68.54 | 42.07 |
| KRH51683 | Soybean | plasma membrane | 22.47 | 41.96 |
| PGSC0003DMT400025569 | Potato | extracellular | 27.72 | 41.93 |
| KRH17463 | Soybean | endoplasmic reticulum, golgi | 28.46 | 41.87 |
| Bra025794.1-P | Field mustard | plasma membrane | 69.48 | 41.69 |
| KRH17461 | Soybean | nucleus | 28.65 | 41.58 |
| KRH05977 | Soybean | nucleus | 28.84 | 41.4 |
| KRH05980 | Soybean | endoplasmic reticulum, golgi | 28.09 | 41.32 |
| AT1G58725.1 | Thale cress | extracellular | 26.97 | 41.26 |
| AT1G59030.1 | Thale cress | extracellular, plasma membrane | 26.97 | 41.26 |
| AT1G59406.1 | Thale cress | extracellular | 26.97 | 41.26 |
| PGSC0003DMT400025568 | Potato | extracellular | 26.97 | 41.14 |
| Solyc04g081760.2.1 | Tomato | extracellular | 20.41 | 41.13 |
| AT5G42170.1 | Thale cress | extracellular | 28.28 | 40.92 |
| Bra012212.1-P | Field mustard | plastid | 60.3 | 40.71 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, vacuole | 25.09 | 40.48 |
| GSMUA_Achr5P11240_001 | Banana | extracellular, golgi | 27.15 | 40.17 |
| KRH17462 | Soybean | extracellular, plasma membrane, plastid | 27.53 | 40.05 |
| Solyc04g081780.2.1 | Tomato | extracellular | 25.66 | 39.94 |
| CDY67439 | Canola | plasma membrane | 66.67 | 39.69 |
| AT1G75890.3 | Thale cress | plastid | 29.03 | 39.24 |
| EER88779 | Sorghum | extracellular, golgi, mitochondrion, plastid | 27.9 | 39.11 |
| GSMUA_Achr4P25550_001 | Banana | extracellular, golgi, vacuole | 26.4 | 38.84 |
| TraesCS7A01G339400.1 | Wheat | extracellular | 25.28 | 38.57 |
| TraesCS7B01G250800.1 | Wheat | extracellular | 25.28 | 38.57 |
| TraesCS6D01G093000.1 | Wheat | extracellular, plasma membrane | 26.4 | 38.52 |
| KRH05978 | Soybean | plastid | 27.15 | 38.46 |
| HORVU7Hr1G083440.4 | Barley | extracellular | 25.47 | 38.31 |
| TraesCS7D01G347000.1 | Wheat | extracellular | 25.09 | 38.29 |
| Os10t0438600-01 | Rice | plasma membrane | 25.66 | 38.27 |
| TraesCS7B01G250700.1 | Wheat | extracellular, vacuole | 25.28 | 38.24 |
| TraesCS6A01G104300.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 26.78 | 38.24 |
| Zm00001d032888_P001 | Maize | mitochondrion | 26.03 | 38.08 |
| HORVU6Hr1G018750.1 | Barley | endoplasmic reticulum, plasma membrane | 27.72 | 38.05 |
| TraesCS7D01G346700.1 | Wheat | extracellular | 25.28 | 38.03 |
| TraesCS5D01G566800.1 | Wheat | endoplasmic reticulum, golgi | 26.4 | 38.01 |
| AT3G14820.1 | Thale cress | extracellular, plasma membrane | 24.91 | 37.89 |
| TraesCS6B01G139100.1 | Wheat | extracellular, golgi | 24.91 | 37.89 |
| Os03t0859100-01 | Rice | golgi | 25.84 | 37.81 |
| TraesCS5B01G562600.1 | Wheat | golgi, mitochondrion | 26.22 | 37.74 |
| GSMUA_Achr4P25720_001 | Banana | vacuole | 25.47 | 37.57 |
| TraesCS6B01G133500.1 | Wheat | extracellular | 25.47 | 37.47 |
| KRH05976 | Soybean | nucleus | 26.03 | 37.37 |
| TraesCS6A01G111000.1 | Wheat | extracellular, golgi | 24.53 | 37.32 |
| EER97970 | Sorghum | plastid | 26.78 | 37.24 |
| EER99270 | Sorghum | extracellular, plasma membrane | 25.09 | 37.22 |
| AT2G30310.1 | Thale cress | vacuole | 24.91 | 37.05 |
| KRH17460 | Soybean | nucleus | 25.09 | 37.02 |
| TraesCS4A01G316500.1 | Wheat | golgi | 25.84 | 37.0 |
| KXG34395 | Sorghum | plastid | 27.15 | 36.99 |
| HORVU5Hr1G125000.1 | Barley | vacuole | 25.66 | 36.93 |
| TraesCS2A01G477400.1 | Wheat | golgi, vacuole | 25.09 | 36.91 |
| Os02t0101400-01 | Rice | cytosol | 19.48 | 36.88 |
| AT2G30220.1 | Thale cress | extracellular | 24.72 | 36.87 |
| TraesCS4B01G010200.1 | Wheat | endoplasmic reticulum | 25.47 | 36.76 |
| TraesCS1D01G138700.1 | Wheat | endoplasmic reticulum, vacuole | 25.66 | 36.73 |
| Os09t0540400-02 | Rice | extracellular, plasma membrane | 25.09 | 36.61 |
| Zm00001d018791_P001 | Maize | plastid | 26.59 | 36.5 |
| TraesCS2B01G297300.1 | Wheat | plasma membrane | 23.97 | 36.47 |
| TraesCS2D01G278500.1 | Wheat | plasma membrane, vacuole | 23.97 | 36.47 |
| AT1G06990.1 | Thale cress | extracellular, plasma membrane, vacuole | 24.53 | 36.39 |
| HORVU1Hr1G036440.1 | Barley | endoplasmic reticulum, extracellular, plastid | 25.28 | 36.29 |
| TraesCS1B01G156300.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 25.28 | 36.29 |
| AT2G40250.1 | Thale cress | vacuole | 24.53 | 36.29 |
| Os06t0351500-01 | Rice | endoplasmic reticulum, golgi, mitochondrion, plastid | 25.66 | 36.24 |
| TraesCS2D01G476600.1 | Wheat | mitochondrion | 25.28 | 36.1 |
| TraesCS1A01G135900.1 | Wheat | plastid | 25.09 | 36.02 |
| AT2G31540.1 | Thale cress | endoplasmic reticulum, extracellular | 24.16 | 35.83 |
| TraesCS2B01G500500.1 | Wheat | mitochondrion | 25.09 | 35.83 |
| HORVU7Hr1G083530.2 | Barley | golgi | 25.28 | 35.62 |
| EER90469 | Sorghum | extracellular, vacuole | 25.09 | 35.45 |
| GSMUA_Achr4P25560_001 | Banana | extracellular, golgi | 24.34 | 35.42 |
| HORVU6Hr1G001510.1 | Barley | endoplasmic reticulum, vacuole | 25.28 | 35.06 |
| HORVU2Hr1G068430.1 | Barley | endoplasmic reticulum, mitochondrion, plasma membrane | 24.72 | 34.92 |
| Os10t0140300-01 | Rice | plasma membrane | 22.66 | 34.67 |
| TraesCS4A01G303600.1 | Wheat | cytosol | 13.67 | 34.6 |
| AT2G24560.1 | Thale cress | extracellular, vacuole | 23.41 | 34.44 |
| AT4G26790.1 | Thale cress | extracellular, golgi | 22.47 | 34.19 |
| Zm00001d034917_P001 | Maize | mitochondrion | 23.97 | 34.04 |
| TraesCS1D01G322600.1 | Wheat | mitochondrion, plastid | 24.91 | 33.76 |
| TraesCS7D01G346900.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 15.17 | 33.75 |
| TraesCS6D01G002800.1 | Wheat | mitochondrion | 25.84 | 33.74 |
| AT1G58430.1 | Thale cress | vacuole | 22.66 | 33.61 |
| AT2G04570.1 | Thale cress | extracellular | 21.91 | 33.43 |
| TraesCS5A01G327300.1 | Wheat | cytosol | 13.86 | 33.33 |
| TraesCS1A01G322600.1 | Wheat | mitochondrion | 24.53 | 33.25 |
| KXG38464 | Sorghum | cytosol | 26.4 | 33.1 |
| HORVU2Hr1G107400.3 | Barley | mitochondrion | 13.67 | 32.74 |
| Zm00001d022615_P001 | Maize | mitochondrion, plasma membrane | 25.09 | 32.68 |
| TraesCS5B01G562700.1 | Wheat | golgi | 23.03 | 32.11 |
| TraesCS4A01G316400.1 | Wheat | mitochondrion | 23.22 | 32.04 |
| AT5G45960.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 22.47 | 32.0 |
| TraesCS6B01G007700.1 | Wheat | plastid | 24.91 | 31.82 |
| TraesCS1B01G334900.1 | Wheat | plastid | 25.28 | 31.76 |
| HORVU5Hr1G124980.2 | Barley | plastid | 23.97 | 31.3 |
| AT2G42990.1 | Thale cress | extracellular | 20.22 | 30.86 |
| TraesCS5D01G566700.1 | Wheat | mitochondrion | 23.22 | 30.77 |
| TraesCS7A01G339300.1 | Wheat | cytosol | 15.73 | 30.77 |
| AT5G45950.1 | Thale cress | extracellular, plasma membrane | 20.41 | 30.53 |
| TraesCS6A01G002700.1 | Wheat | mitochondrion | 25.84 | 29.42 |
| Zm00001d014308_P001 | Maize | endoplasmic reticulum | 35.58 | 29.1 |
| Zm00001d014918_P001 | Maize | mitochondrion | 24.34 | 27.43 |
| OQU84135 | Sorghum | plasma membrane | 25.09 | 25.67 |
| VIT_18s0001g14770.t01 | Wine grape | plastid | 29.59 | 25.16 |
| KXG38704 | Sorghum | endoplasmic reticulum, plasma membrane | 33.71 | 23.94 |
Protein Annotations
| Gene3D:3.40.50.1110 | MapMan:35.1 | EntrezGene:838602 | ProteinID:AAF79900.1 | ProteinID:AEE29939.1 | ArrayExpress:AT1G20130 |
| EnsemblPlantsGene:AT1G20130 | RefSeq:AT1G20130 | TAIR:AT1G20130 | RefSeq:AT1G20130-TAIR-G | EnsemblPlants:AT1G20130.1 | TAIR:AT1G20130.1 |
| EMBL:AY058847 | Unigene:At.5342 | EMBL:BT008301 | ProteinID:CAA42925.1 | InterPro:GDSL | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005198 | GO:GO:0005199 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016298 | GO:GO:0016787 | GO:GO:0016788 | InterPro:IPR036514 | InterPro:Lipase_GDSL_AS | RefSeq:NP_173441.2 |
| UniProt:P40602 | PFAM:PF00657 | PRINTS:PR01218 | ScanProsite:PS01098 | PANTHER:PTHR22835 | PANTHER:PTHR22835:SF330 |
| InterPro:Pistil_extensin | InterPro:SGNH_hydro_sf | InterPro:SGNH_plant_lipase_like | SUPFAM:SSF52266 | TMHMM:TMhelix | UniParc:UPI0000125C76 |
| SEG:seg | : | : | : | : | : |
Description
APGAnther-specific proline-rich protein APG [Source:UniProtKB/Swiss-Prot;Acc:P40602]
Coordinates
chr1:+:6977880..6980241
Molecular Weight (calculated)
58010.4 Da
IEP (calculated)
10.056
GRAVY (calculated)
-0.415
Length
534 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRSSLVDSC SYSRIFRSIF CLLSFCIFFL TTTNAQVMHR RLWPWPLWPR PYPQPWPMNP PTPDPSPKPV APPGPSSKPV APPGPSPCPS PPPKPQPKPP
101: PAPSPSPCPS PPPKPQPKPV PPPACPPTPP KPQPKPAPPP EPKPAPPPAP KPVPCPSPPK PPAPTPKPVP PHGPPPKPAP APTPAPSPKP APSPPKPENK
201: TIPAVFFFGD SVFDTGNNNN LETKIKSNYR PYGMDFKFRV ATGRFSNGMV ASDYLAKYMG VKEIVPAYLD PKIQPNDLLT GVSFASGGAG YNPTTSEAAN
301: AIPMLDQLTY FQDYIEKVNR LVRQEKSQYK LAGLEKTNQL ISKGVAIVVG GSNDLIITYF GSGAQRLKND IDSYTTIIAD SAASFVLQLY GYGARRIGVI
401: GTPPLGCVPS QRLKKKKICN EELNYASQLF NSKLLLILGQ LSKTLPNSTF VYMDIYTIIS QMLETPAAYG FEETKKPCCK TGLLSAGALC KKSTSKICPN
501: TSSYLFWDGV HPTQRAYKTI NKVLIKEYLH VLSK
101: PAPSPSPCPS PPPKPQPKPV PPPACPPTPP KPQPKPAPPP EPKPAPPPAP KPVPCPSPPK PPAPTPKPVP PHGPPPKPAP APTPAPSPKP APSPPKPENK
201: TIPAVFFFGD SVFDTGNNNN LETKIKSNYR PYGMDFKFRV ATGRFSNGMV ASDYLAKYMG VKEIVPAYLD PKIQPNDLLT GVSFASGGAG YNPTTSEAAN
301: AIPMLDQLTY FQDYIEKVNR LVRQEKSQYK LAGLEKTNQL ISKGVAIVVG GSNDLIITYF GSGAQRLKND IDSYTTIIAD SAASFVLQLY GYGARRIGVI
401: GTPPLGCVPS QRLKKKKICN EELNYASQLF NSKLLLILGQ LSKTLPNSTF VYMDIYTIIS QMLETPAAYG FEETKKPCCK TGLLSAGALC KKSTSKICPN
501: TSSYLFWDGV HPTQRAYKTI NKVLIKEYLH VLSK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.