Factsheet for HORVU2Hr1G107400.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G076010.1
HORVU3Hr1G026980.2
HORVU3Hr1G071060.1
HORVU7Hr1G003870.3
HORVU7Hr1G003880.2
HORVU7Hr1G088900.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G75880.1	HORVU1Hr1G076010.1	AT3G16310.1	21798944
AT1G75880.1	HORVU3Hr1G026980.2	AT3G16310.1	21798944
AT1G75880.1	HORVU3Hr1G071060.1	AT3G16310.1	21798944
AT1G75880.1	HORVU7Hr1G088900.1	AT4G19030.1	21798944
AT1G75880.1	HORVU7Hr1G003870.3	AT5G24290.1	21798944
AT1G75880.1	HORVU7Hr1G003880.2	AT5G24290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G476600.1	Wheat	mitochondrion	90.13	53.74
TraesCS2B01G500500.1	Wheat	mitochondrion	88.79	52.94
TraesCS2A01G477400.1	Wheat	golgi, vacuole	83.41	51.24
Os03t0859100-01	Rice	golgi	62.33	38.08
EER90469	Sorghum	extracellular, vacuole	64.13	37.83
Zm00001d034917_P001	Maize	mitochondrion	63.23	37.5
PGSC0003DMT400070969	Potato	extracellular	35.87	37.38
HORVU5Hr1G125000.1	Barley	vacuole	59.19	35.58
CDY53562	Canola	extracellular	37.22	33.47
HORVU5Hr1G124980.2	Barley	plastid	60.09	32.76
Solyc04g081760.2.1	Tomato	extracellular	37.22	31.32
GSMUA_Achr4P25560_001	Banana	extracellular, golgi	49.78	30.25
KRH51683	Soybean	plasma membrane	37.22	29.02
AT3G43550.1	Thale cress	extracellular	36.77	28.47
VIT_18s0001g14810.t01	Wine grape	cytosol	43.5	28.03
VIT_18s0001g14780.t01	Wine grape	plasma membrane	42.15	27.98
HORVU1Hr1G036440.1	Barley	endoplasmic reticulum, extracellular, plastid	44.84	26.88
KRH08025	Soybean	extracellular, vacuole	43.5	26.5
VIT_18s0001g14790.t01	Wine grape	endoplasmic reticulum, golgi	42.6	26.46
KRH17463	Soybean	endoplasmic reticulum, golgi	43.05	26.45
KRH05980	Soybean	endoplasmic reticulum, golgi	42.6	26.17
KRH69753	Soybean	extracellular, plasma membrane, vacuole	42.6	26.03
KRH51682	Soybean	extracellular, golgi	42.15	25.82
VIT_18s0001g14800.t01	Wine grape	extracellular, golgi	42.15	25.82
HORVU6Hr1G001510.1	Barley	endoplasmic reticulum, vacuole	44.39	25.71
KRH61020	Soybean	endoplasmic reticulum, golgi, plastid	41.7	25.55
KRH55990	Soybean	extracellular, plasma membrane, vacuole	41.7	25.48
CDY48852	Canola	extracellular	37.22	25.46
CDY53577	Canola	extracellular	37.22	25.46
KRH28831	Soybean	plasma membrane	41.7	25.41
CDY09420	Canola	extracellular	36.32	25.31
CDY64565	Canola	extracellular	36.32	25.31
CDY41727	Canola	extracellular	36.77	25.15
CDY41728	Canola	extracellular	36.77	25.15
KRH55991	Soybean	extracellular	40.81	25.14
AT3G43570.1	Thale cress	extracellular	35.87	25.0
KRH61019	Soybean	extracellular, plasma membrane	39.91	24.93
Solyc04g081790.2.1	Tomato	extracellular, plasma membrane	39.01	24.86
CDY42062	Canola	cytosol	31.84	24.65
Solyc12g089350.1.1	Tomato	extracellular, golgi	38.12	24.64
Bra015802.1-P	Field mustard	extracellular	39.91	24.59
CDX73211	Canola	extracellular	39.91	24.59
CDX87651	Canola	extracellular	39.91	24.59
KRH55993	Soybean	extracellular	39.91	24.59
Bra015803.1-P	Field mustard	cytosol	38.12	24.57
CDY65553	Canola	extracellular	36.32	24.55
CDX87652	Canola	golgi, plasma membrane	39.91	24.52
Solyc04g081780.2.1	Tomato	extracellular	37.67	24.49
KRH69760	Soybean	extracellular	39.46	24.31
PGSC0003DMT400025568	Potato	extracellular	38.12	24.29
KRH51681	Soybean	extracellular, plasma membrane	38.56	24.09
Bra026636.1-P	Field mustard	extracellular	37.67	24.07
Bra027858.1-P	Field mustard	extracellular	37.67	24.07
Bra027859.1-P	Field mustard	extracellular	37.67	24.07
Bra027951.1-P	Field mustard	extracellular	37.67	24.07
AT1G58525.1	Thale cress	extracellular	36.77	23.98
AT3G14820.1	Thale cress	extracellular, plasma membrane	37.67	23.93
PGSC0003DMT400075642	Potato	extracellular	38.56	23.89
CDY53576	Canola	extracellular	35.87	23.88
KRH17461	Soybean	nucleus	39.01	23.64
CDX73210	Canola	golgi, mitochondrion, plasma membrane	39.01	23.58
CDY51993	Canola	plasma membrane	33.63	23.51
Bra003736.1-P	Field mustard	extracellular, plasma membrane	38.12	23.48
CDX68113	Canola	endoplasmic reticulum, plasma membrane	38.12	23.48
CDX85929	Canola	endoplasmic reticulum, plasma membrane	38.12	23.48
Solyc04g081770.2.1	Tomato	cytosol	35.87	23.46
HORVU7Hr1G083440.4	Barley	extracellular	37.22	23.38
AT1G75900.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	38.12	23.35
AT1G58725.1	Thale cress	extracellular	36.32	23.21
AT1G59030.1	Thale cress	extracellular, plasma membrane	36.32	23.21
AT1G59406.1	Thale cress	extracellular	36.32	23.21
CDY20086	Canola	extracellular, plasma membrane	36.32	23.21
KRH17462	Soybean	extracellular, plasma membrane, plastid	38.12	23.16
KRH05977	Soybean	nucleus	38.56	23.12
PGSC0003DMT400025569	Potato	extracellular	36.32	22.95
Solyc06g048670.2.1	Tomato	extracellular	36.32	22.95
AT1G75880.1	Thale cress	golgi, plasma membrane	38.56	22.93
CDY36116	Canola	extracellular, plasma membrane	32.74	22.88
CDY32339	Canola	extracellular, plasma membrane	35.87	22.79
AT5G42170.1	Thale cress	extracellular	37.67	22.76
CDX85928	Canola	plasma membrane	37.67	22.46
CDY70534	Canola	plasma membrane	37.67	22.46
HORVU7Hr1G083530.2	Barley	golgi	38.12	22.43
KRH17460	Soybean	nucleus	36.32	22.38
KRH05978	Soybean	plastid	37.67	22.28
Bra010987.1-P	Field mustard	plasma membrane	34.53	22.13
Bra012211.1-P	Field mustard	endoplasmic reticulum, plasma membrane	41.26	21.96
CDY57591	Canola	endoplasmic reticulum, plasma membrane	41.26	21.96
CDX87653	Canola	cytosol	30.04	21.9
VIT_18s0001g14760.t01	Wine grape	extracellular	27.35	21.86
HORVU0Hr1G012230.2	Barley	extracellular, vacuole	34.53	21.81
Bra027950.1-P	Field mustard	extracellular	34.08	21.71
Bra015804.1-P	Field mustard	cytosol	29.6	21.57
KRH05976	Soybean	nucleus	35.87	21.51
AT1G20120.1	Thale cress	plasma membrane	38.56	21.39
Bra003737.1-P	Field mustard	cytosol, plastid	30.49	21.12
AT1G75890.3	Thale cress	plastid	36.77	20.76
CDY02386	Canola	golgi	36.32	20.66
HORVU0Hr1G012390.2	Barley	extracellular, vacuole	33.18	20.56
HORVU5Hr1G049650.2	Barley	extracellular, vacuole	33.18	20.56
Solyc04g081800.1.1	Tomato	extracellular, plasma membrane	32.74	20.39
AT1G20132.1	Thale cress	extracellular, vacuole	34.53	20.1
HORVU2Hr1G068430.1	Barley	endoplasmic reticulum, mitochondrion, plasma membrane	33.63	19.84
HORVU1Hr1G070790.1	Barley	extracellular, plastid	33.63	19.63
HORVU6Hr1G035230.1	Barley	extracellular, golgi, mitochondrion	31.39	19.13
HORVU7Hr1G092040.2	Barley	golgi	31.39	18.97
CDY44206	Canola	plasma membrane	31.84	18.59
HORVU3Hr1G087670.3	Barley	extracellular	30.49	18.53
HORVU3Hr1G088120.3	Barley	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	31.39	18.52
KRH08023	Soybean	extracellular	24.22	18.49
Bra016475.1-P	Field mustard	plastid	31.39	18.47
HORVU6Hr1G018750.1	Barley	endoplasmic reticulum, plasma membrane	31.39	17.99
Bra035295.1-P	Field mustard	mitochondrion	22.42	17.36
HORVU6Hr1G035210.2	Barley	cytosol, peroxisome	31.39	17.33
HORVU3Hr1G001200.2	Barley	mitochondrion	29.6	16.02
CDY12974	Canola	golgi, mitochondrion	35.87	14.79
VIT_18s0001g14770.t01	Wine grape	plastid	41.26	14.65
HORVU7Hr1G000470.1	Barley	cytosol	27.35	14.59
HORVU0Hr1G014960.1	Barley	cytosol, mitochondrion	30.04	14.47
CDY69331	Canola	cytosol	16.59	14.34
CDY71376	Canola	plastid	31.39	14.29
AT1G20130.1	Thale cress	mitochondrion	32.74	13.67
CDY44205	Canola	plasma membrane	30.94	12.5
PGSC0003DMT400025571	Potato	cytosol, plasma membrane, plastid	39.01	12.36
CDY54336	Canola	extracellular, golgi, plasma membrane	15.7	11.44
Bra012212.1-P	Field mustard	plastid	31.39	8.85
CDY67439	Canola	plasma membrane	32.29	8.03
CDY29371	Canola	plasma membrane	30.94	7.93
Bra025794.1-P	Field mustard	plasma membrane	30.94	7.75
CDY71031	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU2Hr1G107400.3	EnsemblPlantsGene:HORVU2Hr1G107400	Gene3D:3.40.50.1110	InterPro:IPR036514	InterPro:SGNH_hydro_sf	PANTHER:PTHR22835
PANTHER:PTHR22835:SF282	SEG:seg	SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI000B476B0B	UniProt:A0A287JCR7
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:711753966..711759262

Molecular Weight (calculated)

24165.9 Da

IEP (calculated)

8.324

GRAVY (calculated)

-0.082

Length

223 amino acids

Sequence
(BLAST)

001: RNMHTSTAMR RTCRTALVAA AVVVVALATA PAVCESQTTK QQQQRQKKKG PLVTAVIVFG DSIMDPGNNN GLHTLVKANH APYGKDFANH EPTGRFSNGL
101: IPTDFMAQGL NVKQLLPPYL GVEHTPEDLL TGVSFASGAT GFDPLTPIIV NVISLEQQLA YFDEYRGKLV GIAGEEGTRR VIDGALFVVC AGTDDIANTY
201: YTTPFRSAHY DVLRSVSWAR RCV

Best Arabidopsis Sequence Match ( AT1G20120.1 )
(BLAST)

001: MLQDRVSGSL SSSKISRCVL FLSLFCFFLL TMHASANRLQ RVPNPGPSPA PEPKPCPSPG PNPAPATTKR THNTTFPAIF AFGDSILDTG NNDYILTLIK
101: ANFLPYGMNF PDKVPTGRFC NGKIPSDFIA DYIGVKPVVP AYLRPGLTQE DLLTGVSFAS GGSGYDPLTP IVVSAIPMSK QLTYFQEYIE KVKGFVGKEK
201: AEHIISKGLA IVVAGSDDLA NTYYGEHLEE FLYDIDTYTS FMASSAASFA MQLYESGAKK IGFIGVSPIG CIPIQRTTRG GLKRKCADEL NFAAQLFNSK
301: LSTSLNELAK TMKNTTLVYI DIYSSFNDMI QNPKKYGFDE IDRGCCGTGL LELGPLCNKY TSLLCKNVSS FMFWDSYHPT ERAYKILSQK FVENDMGPFY
401: DN

Arabidopsis Description

GDSL esterase/lipase At1g20120 [Source:UniProtKB/Swiss-Prot;Acc:P0DKJ6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.