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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • nucleus 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:nucleus, plastid, secretory
BaCelLo:secretory
EpiLoc:nucleus
iPSORT:plastid
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400001535
PGSC0003DMT400006495
PGSC0003DMT400071510
PGSC0003DMT400071835
PGSC0003DMT400073246

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G75880.1 PGSC0003DMT400006495 AT3G16310.1 21798944
AT1G75880.1 PGSC0003DMT400071510 AT4G19030.1 21798944
AT1G75880.1 PGSC0003DMT400073246 AT4G19030.1 21798944
AT1G75880.1 PGSC0003DMT400001535 AT5G24290.1 21798944
AT1G75880.1 PGSC0003DMT400071835 AT5G24290.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc06g048670.2.1 Tomato extracellular 91.59 55.52
CDY53562 Canola extracellular 46.73 40.32
KRH51683 Soybean plasma membrane 50.47 37.76
TraesCS7D01G346900.1 Wheat endoplasmic reticulum, plasma membrane, plastid 42.06 37.5
PGSC0003DMT400025568 Potato extracellular 58.88 36.0
HORVU2Hr1G107400.3 Barley mitochondrion 37.38 35.87
PGSC0003DMT400075642 Potato extracellular 59.35 35.28
PGSC0003DMT400025569 Potato extracellular 56.07 33.99
KRH05980 Soybean endoplasmic reticulum, golgi 56.54 33.33
KRH17463 Soybean endoplasmic reticulum, golgi 56.54 33.33
VIT_18s0001g14780.t01 Wine grape plasma membrane 51.4 32.74
AT3G43550.1 Thale cress extracellular 43.93 32.64
KRH51682 Soybean extracellular, golgi 54.67 32.14
KRH61020 Soybean endoplasmic reticulum, golgi, plastid 54.21 31.87
VIT_18s0001g14790.t01 Wine grape endoplasmic reticulum, golgi 52.8 31.48
VIT_18s0001g14810.t01 Wine grape cytosol 50.0 30.92
KRH17461 Soybean nucleus 52.8 30.71
KRH05977 Soybean nucleus 53.27 30.65
CDX73211 Canola extracellular 51.4 30.39
GSMUA_Achr11P... Banana endoplasmic reticulum, vacuole 46.26 29.91
Bra015802.1-P Field mustard extracellular 50.47 29.83
CDX87651 Canola extracellular 50.47 29.83
VIT_18s0001g14800.t01 Wine grape extracellular, golgi 50.47 29.67
KRH17460 Soybean nucleus 50.0 29.56
CDY51993 Canola plasma membrane 43.46 29.15
KRH61019 Soybean extracellular, plasma membrane 48.6 29.13
AT3G43570.1 Thale cress extracellular 43.46 29.06
Bra015803.1-P Field mustard cytosol 46.73 28.9
CDY36116 Canola extracellular, plasma membrane 42.99 28.84
KRH51681 Soybean extracellular, plasma membrane 47.66 28.57
CDY41727 Canola extracellular 43.46 28.53
CDY41728 Canola extracellular 43.46 28.53
CDY48852 Canola extracellular 43.46 28.53
CDY53577 Canola extracellular 43.46 28.53
KRH05976 Soybean nucleus 49.53 28.49
CDY09420 Canola extracellular 42.52 28.44
CDY64565 Canola extracellular 42.52 28.44
Bra003736.1-P Field mustard extracellular, plasma membrane 47.66 28.18
CDX85929 Canola endoplasmic reticulum, plasma membrane 47.66 28.18
CDY42062 Canola cytosol 37.85 28.12
KRH17462 Soybean extracellular, plasma membrane, plastid 48.13 28.07
AT1G75900.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 47.66 28.02
CDX68113 Canola endoplasmic reticulum, plasma membrane 47.2 27.9
CDY65553 Canola extracellular 42.99 27.88
CDX87652 Canola golgi, plasma membrane 47.2 27.82
GSMUA_Achr4P25550_001 Banana extracellular, golgi, vacuole 47.2 27.82
AT1G58525.1 Thale cress extracellular 44.39 27.78
Zm00001d032888_P001 Maize mitochondrion 47.2 27.67
Os10t0438600-01 Rice plasma membrane 46.26 27.65
Os09t0540400-02 Rice extracellular, plasma membrane 47.2 27.6
CDY20086 Canola extracellular, plasma membrane 44.86 27.51
AT5G42170.1 Thale cress extracellular 47.2 27.37
CDX73210 Canola golgi, mitochondrion, plasma membrane 47.2 27.37
VIT_18s0001g14760.t01 Wine grape extracellular 35.51 27.24
Bra027858.1-P Field mustard extracellular 44.39 27.22
CDY53576 Canola extracellular 42.52 27.16
GSMUA_Achr5P11240_001 Banana extracellular, golgi 45.79 27.15
CDY32339 Canola extracellular, plasma membrane 44.39 27.07
Bra010987.1-P Field mustard plasma membrane 43.93 27.01
EER99270 Sorghum extracellular, plasma membrane 45.33 26.94
AT1G58725.1 Thale cress extracellular 43.93 26.93
AT1G59030.1 Thale cress extracellular, plasma membrane 43.93 26.93
AT1G59406.1 Thale cress extracellular 43.93 26.93
Bra027859.1-P Field mustard extracellular 43.93 26.93
Bra027951.1-P Field mustard extracellular 43.93 26.93
TraesCS7A01G339400.1 Wheat extracellular 43.93 26.86
KRH05978 Soybean plastid 47.2 26.79
AT3G14820.1 Thale cress extracellular, plasma membrane 43.93 26.78
TraesCS6A01G111000.1 Wheat extracellular, golgi 43.93 26.78
CDY70534 Canola plasma membrane 46.73 26.74
TraesCS7D01G347000.1 Wheat extracellular 43.46 26.57
TraesCS6B01G139100.1 Wheat extracellular, golgi 43.46 26.5
CDX85928 Canola plasma membrane 46.26 26.47
Bra026636.1-P Field mustard extracellular 42.99 26.36
TraesCS7B01G250800.1 Wheat extracellular 42.99 26.29
HORVU1Hr1G036440.1 Barley endoplasmic reticulum, extracellular, plastid 45.33 26.08
TraesCS7B01G250700.1 Wheat extracellular, vacuole 42.99 26.06
AT1G20120.1 Thale cress plasma membrane 48.6 25.87
EER97970 Sorghum plastid 45.79 25.52
Os06t0351500-01 Rice endoplasmic reticulum, golgi, mitochondrion, plastid 44.86 25.4
TraesCS7D01G346700.1 Wheat extracellular 42.06 25.35
GSMUA_Achr4P25560_001 Banana extracellular, golgi 43.46 25.34
Bra012211.1-P Field mustard endoplasmic reticulum, plasma membrane 49.53 25.3
CDY57591 Canola endoplasmic reticulum, plasma membrane 49.53 25.3
TraesCS1A01G135900.1 Wheat plastid 43.93 25.27
TraesCS1B01G156300.1 Wheat endoplasmic reticulum, plasma membrane, plastid 43.93 25.27
Os03t0859100-01 Rice golgi 42.99 25.21
TraesCS1D01G138700.1 Wheat endoplasmic reticulum, vacuole 43.93 25.2
Bra027950.1-P Field mustard extracellular 41.12 25.14
HORVU7Hr1G083440.4 Barley extracellular 41.59 25.07
AT1G75880.1 Thale cress golgi, plasma membrane 43.93 25.07
CDY02386 Canola golgi 45.33 24.74
Zm00001d018791_P001 Maize plastid 44.86 24.68
HORVU6Hr1G001510.1 Barley endoplasmic reticulum, vacuole 44.39 24.68
EER90469 Sorghum extracellular, vacuole 43.46 24.6
GSMUA_Achr4P25720_001 Banana vacuole 41.59 24.59
HORVU7Hr1G083530.2 Barley golgi 43.46 24.54
CDX87653 Canola cytosol 35.05 24.51
AT1G75890.3 Thale cress plastid 44.86 24.3
Bra003737.1-P Field mustard cytosol, plastid 36.45 24.22
Bra015804.1-P Field mustard cytosol 34.58 24.18
KXG34395 Sorghum plastid 43.93 23.98
TraesCS4B01G010200.1 Wheat endoplasmic reticulum 41.12 23.78
AT1G20132.1 Thale cress extracellular, vacuole 42.52 23.76
TraesCS5D01G566800.1 Wheat endoplasmic reticulum, golgi 41.12 23.72
Zm00001d022615_P001 Maize mitochondrion, plasma membrane 45.33 23.66
EER88779 Sorghum extracellular, golgi, mitochondrion, plastid 42.06 23.62
TraesCS1A01G322600.1 Wheat mitochondrion 43.46 23.6
TraesCS1D01G322600.1 Wheat mitochondrion, plastid 43.46 23.6
TraesCS4A01G316500.1 Wheat golgi 41.12 23.59
CDY44206 Canola plasma membrane 42.06 23.56
PGSC0003DMT400001828 Potato extracellular 38.78 23.51
KXG38464 Sorghum cytosol 46.73 23.47
TraesCS5B01G562600.1 Wheat golgi, mitochondrion 40.65 23.45
TraesCS7A01G339300.1 Wheat cytosol 29.91 23.44
TraesCS2A01G477400.1 Wheat golgi, vacuole 39.72 23.42
Bra016475.1-P Field mustard plastid 41.12 23.22
HORVU5Hr1G125000.1 Barley vacuole 40.19 23.18
Zm00001d034917_P001 Maize mitochondrion 40.65 23.14
TraesCS6D01G002800.1 Wheat mitochondrion 43.93 22.98
TraesCS6B01G007700.1 Wheat plastid 44.86 22.97
Os10t0140300-01 Rice plasma membrane 37.38 22.92
PGSC0003DMT400068453 Potato cytosol 36.92 22.9
TraesCS1B01G334900.1 Wheat plastid 45.33 22.82
TraesCS2B01G500500.1 Wheat mitochondrion 39.72 22.73
TraesCS2D01G476600.1 Wheat mitochondrion 39.72 22.73
TraesCS6D01G093000.1 Wheat extracellular, plasma membrane 38.78 22.68
TraesCS6B01G133500.1 Wheat extracellular 38.32 22.59
Bra035295.1-P Field mustard mitochondrion 30.37 22.57
PGSC0003DMT400001826 Potato endoplasmic reticulum, extracellular, vacuole 37.38 22.47
TraesCS6A01G104300.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 39.25 22.46
PGSC0003DMT400038810 Potato extracellular 36.92 22.32
TraesCS4A01G316400.1 Wheat mitochondrion 40.19 22.22
TraesCS5B01G562700.1 Wheat golgi 39.72 22.19
PGSC0003DMT400038808 Potato golgi, plasma membrane 36.92 22.19
PGSC0003DMT400086168 Potato extracellular 32.71 22.08
PGSC0003DMT400058744 Potato plasma membrane 37.38 21.98
TraesCS2B01G297300.1 Wheat plasma membrane 35.51 21.65
TraesCS2D01G278500.1 Wheat plasma membrane, vacuole 35.51 21.65
TraesCS5D01G566700.1 Wheat mitochondrion 39.25 20.84
PGSC0003DMT400027838 Potato extracellular 34.58 20.67
HORVU6Hr1G018750.1 Barley endoplasmic reticulum, plasma membrane 37.38 20.57
HORVU5Hr1G124980.2 Barley plastid 39.25 20.54
Os02t0101400-01 Rice cytosol 26.64 20.21
HORVU2Hr1G068430.1 Barley endoplasmic reticulum, mitochondrion, plasma membrane 35.05 19.84
TraesCS6A01G002700.1 Wheat mitochondrion 43.46 19.83
CDY69331 Canola cytosol 22.9 18.99
Zm00001d014918_P001 Maize mitochondrion 41.59 18.78
CDY12974 Canola golgi, mitochondrion 45.33 17.93
OQU84135 Sorghum plasma membrane 43.46 17.82
CDY71376 Canola plastid 40.65 17.76
AT1G20130.1 Thale cress mitochondrion 43.46 17.42
VIT_18s0001g14770.t01 Wine grape plastid 50.47 17.2
CDY44205 Canola plasma membrane 42.06 16.3
PGSC0003DMT400025571 Potato cytosol, plasma membrane, plastid 50.93 15.48
CDY54336 Canola extracellular, golgi, plasma membrane 20.56 14.38
Zm00001d014308_P001 Maize endoplasmic reticulum 39.25 12.86
Bra012212.1-P Field mustard plastid 40.65 11.0
KXG38704 Sorghum endoplasmic reticulum, plasma membrane 38.32 10.9
TraesCS4A01G303600.1 Wheat cytosol 10.75 10.9
TraesCS5A01G327300.1 Wheat cytosol 11.21 10.81
CDY67439 Canola plasma membrane 43.46 10.37
CDY29371 Canola plasma membrane 42.06 10.34
Bra025794.1-P Field mustard plasma membrane 42.06 10.11
PGSC0003DMT400091356 Potato cytosol, nucleus, plasma membrane 35.98 9.77
CDY71031 Canola cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:PGSC0003DMT400070969EnsemblPlantsGene:PGSC0003DMG400027600Gene3D:3.40.50.1110InterPro:IPR036514InterPro:SGNH_hydro_sfPANTHER:PTHR22835
PANTHER:PTHR22835:SF330PGSC:PGSC0003DMG400027600SignalP:SignalP-noTMUniParc:UPI0002956FD5UniProt:M1CN17MapMan:35.1
Description
Zinc finger protein [Source:PGSC_GENE;Acc:PGSC0003DMG400027600]
Coordinates
chr6:+:34861655..34863729
Molecular Weight (calculated)
23703.2 Da
IEP (calculated)
5.228
GRAVY (calculated)
-0.022
Length
214 amino acids
Sequence
(BLAST)
001: MLYVVVCQAL LFSACISEAK VKLPEKAVVP AVYAFGDSIV DQGNNNYLAT TVKCNFPPYG KDLRDSIPTG RFSNAKTPPD LIAEELGIKG LIPAYLDPNL
101: KDEDLKTGVS FASGGCGYDP LTGSALSILH LSDQLTLFQE YIEKLKSLVG KQEATHILNN SFYMVVAGSN DFLNNYYVTG FRKHQYDINS YIDHIVSWAS
201: NFVQTLNFDY LRFG
Best Arabidopsis Sequence Match ( AT1G20120.1 )
(BLAST)
001: MLQDRVSGSL SSSKISRCVL FLSLFCFFLL TMHASANRLQ RVPNPGPSPA PEPKPCPSPG PNPAPATTKR THNTTFPAIF AFGDSILDTG NNDYILTLIK
101: ANFLPYGMNF PDKVPTGRFC NGKIPSDFIA DYIGVKPVVP AYLRPGLTQE DLLTGVSFAS GGSGYDPLTP IVVSAIPMSK QLTYFQEYIE KVKGFVGKEK
201: AEHIISKGLA IVVAGSDDLA NTYYGEHLEE FLYDIDTYTS FMASSAASFA MQLYESGAKK IGFIGVSPIG CIPIQRTTRG GLKRKCADEL NFAAQLFNSK
301: LSTSLNELAK TMKNTTLVYI DIYSSFNDMI QNPKKYGFDE IDRGCCGTGL LELGPLCNKY TSLLCKNVSS FMFWDSYHPT ERAYKILSQK FVENDMGPFY
401: DN
Arabidopsis Description
GDSL esterase/lipase At1g20120 [Source:UniProtKB/Swiss-Prot;Acc:P0DKJ6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.