Factsheet for PGSC0003DMT400038810

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g043320.1.1	Tomato	cytosol	62.71	97.37
PGSC0003DMT400038808	Potato	golgi, plasma membrane	77.12	76.69
PGSC0003DMT400001828	Potato	extracellular	65.54	65.72
VIT_19s0090g01160.t01	Wine grape	extracellular, golgi	57.63	59.3
PGSC0003DMT400001826	Potato	endoplasmic reticulum, extracellular, vacuole	57.06	56.74
AT4G26790.1	Thale cress	extracellular, golgi	55.08	55.56
Bra026402.1-P	Field mustard	extracellular	54.52	54.99
CDX89302	Canola	extracellular	54.52	54.99
CDY29250	Canola	extracellular	54.52	54.99
GSMUA_Achr2P05280_001	Banana	extracellular	48.31	53.94
GSMUA_Achr4P09480_001	Banana	endoplasmic reticulum, golgi	53.11	53.71
GSMUA_Achr7P05490_001	Banana	endoplasmic reticulum, extracellular	52.54	52.84
TraesCS6A01G172800.1	Wheat	extracellular, vacuole	50.56	52.49
GSMUA_Achr3P13030_001	Banana	endoplasmic reticulum, golgi	51.69	51.84
TraesCS6B01G200400.1	Wheat	extracellular, plastid	50.28	51.74
TraesCS6D01G161900.1	Wheat	endoplasmic reticulum	50.56	49.58
TraesCS3A01G007800.1	Wheat	endoplasmic reticulum, extracellular	48.87	49.15
TraesCSU01G186900.1	Wheat	extracellular	48.87	49.15
TraesCSU01G210200.1	Wheat	extracellular	48.87	49.15
GSMUA_Achr4P09470_001	Banana	extracellular	48.31	49.14
TraesCSU01G187000.1	Wheat	extracellular	47.74	48.99
Zm00001d015636_P001	Maize	extracellular	49.15	48.2
TraesCS6D01G162000.3	Wheat	extracellular, vacuole	48.31	48.03
OQU84537	Sorghum	endoplasmic reticulum, extracellular	48.31	48.03
Zm00001d015637_P001	Maize	extracellular	48.59	47.91
TraesCS6B01G200500.1	Wheat	extracellular, golgi	48.02	47.75
Zm00001d036770_P001	Maize	mitochondrion	50.0	47.58
TraesCS6A01G172900.1	Wheat	extracellular, golgi	48.02	47.49
TraesCS3D01G002900.1	Wheat	plastid	48.02	47.49
HORVU6Hr1G035230.1	Barley	extracellular, golgi, mitochondrion	48.59	46.99
Os06t0636700-01	Rice	extracellular	50.56	46.86
Os09t0132900-02	Rice	extracellular	46.33	46.59
EER90082	Sorghum	golgi	48.02	46.2
Os02t0189300-01	Rice	endoplasmic reticulum, extracellular	47.46	46.15
TraesCS5A01G164200.1	Wheat	extracellular	46.33	45.94
TraesCS7D01G384600.1	Wheat	endoplasmic reticulum, extracellular, golgi	47.18	45.88
HORVU7Hr1G092040.2	Barley	golgi	47.74	45.8
Zm00001d019855_P001	Maize	extracellular, golgi	45.48	45.74
TraesCS7B01G290600.1	Wheat	golgi	47.18	45.63
Os02t0189200-01	Rice	extracellular	48.59	45.62
TraesCS7A01G388700.1	Wheat	extracellular	46.89	45.48
HORVU5Hr1G049650.2	Barley	extracellular, vacuole	46.05	45.28
HORVU0Hr1G012390.2	Barley	extracellular, vacuole	46.05	45.28
EES04670	Sorghum	extracellular	48.02	45.09
Os09t0132200-01	Rice	extracellular	44.63	45.01
TraesCS5D01G169100.1	Wheat	extracellular, golgi	45.48	44.97
EES16382	Sorghum	extracellular, golgi	46.33	44.93
HORVU6Hr1G035210.2	Barley	cytosol, peroxisome	51.13	44.8
Zm00001d046642_P001	Maize	extracellular, golgi	49.15	44.73
TraesCS5B01G161700.1	Wheat	golgi	45.2	44.57
Zm00001d014487_P001	Maize	plastid	44.92	43.68
Zm00001d053252_P001	Maize	extracellular, golgi, mitochondrion	42.66	43.64
OQU76903	Sorghum	plastid	44.35	43.25
HORVU0Hr1G012230.2	Barley	extracellular, vacuole	42.94	43.06
TraesCS5B01G161500.1	Wheat	extracellular	42.66	42.66
TraesCS5A01G164000.1	Wheat	extracellular, vacuole	42.66	42.66
TraesCS5D01G169000.1	Wheat	extracellular	42.37	42.37
Zm00001d000061_P001	Maize	extracellular, golgi	41.53	41.88
EER96404	Sorghum	extracellular, vacuole	42.66	41.6
TraesCS5D01G171800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	42.37	41.32
Os09t0247600-01	Rice	extracellular, golgi	41.24	41.01
TraesCS5B01G164400.1	Wheat	endoplasmic reticulum, vacuole	42.09	40.93
TraesCS5A01G167400.1	Wheat	endoplasmic reticulum, extracellular, vacuole	42.09	40.93
EER94394	Sorghum	extracellular	40.96	40.62
HORVU3Hr1G001200.2	Barley	mitochondrion	44.92	38.59
PGSC0003DMT400027838	Potato	extracellular	38.98	38.55
PGSC0003DMT400068453	Potato	cytosol	37.29	38.26
KXG26546	Sorghum	mitochondrion, plastid	48.02	37.86
PGSC0003DMT400025569	Potato	extracellular	37.57	37.68
PGSC0003DMT400025568	Potato	extracellular	36.72	37.14
PGSC0003DMT400070969	Potato	extracellular	22.32	36.92
PGSC0003DMT400075642	Potato	extracellular	36.72	36.11
PGSC0003DMT400086168	Potato	extracellular	30.51	34.07
PGSC0003DMT400058744	Potato	plasma membrane	34.46	33.52
VIT_12s0059g01590.t01	Wine grape	extracellular	60.73	32.67
PGSC0003DMT400025571	Potato	cytosol, plasma membrane, plastid	31.36	15.77
PGSC0003DMT400091356	Potato	cytosol, nucleus, plasma membrane	32.49	14.59

Protein Annotations

EnsemblPlants:PGSC0003DMT400038810	EnsemblPlantsGene:PGSC0003DMG402014997	Gene3D:3.40.50.1110	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787
GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	PANTHER:PTHR22835
PANTHER:PTHR22835:SF276	PFAM:PF00657	PGSC:PGSC0003DMG402014997	SignalP:SignalP-noTM	SUPFAM:SSF52266	UniParc:UPI000295FE63
UniProt:M1B7D9	MapMan:35.1	:	:	:	:

Description

Zinc finger protein [Source:PGSC_GENE;Acc:PGSC0003DMG402014997]

Coordinates

chr5:-:32109917..32113622

Molecular Weight (calculated)

39916.4 Da

IEP (calculated)

7.824

GRAVY (calculated)

0.014

Length

354 amino acids

Sequence
(BLAST)

001: MTAYNFMPCL ILFFVQLITS CVVGGKVPAI IVFGDSTVDT GNNNQILTVL RSNFPPYGRD YYDKKATGRF CNGRIPPDFI SEAFGLRPFV PAYLDPMYNI
101: TDFAVGVCFA SAGTGYDSAT SHVLNVMPLW KEIENYKEYQ KKLEAYVGIQ KSKYIIQEAL YIVSMGTNDF LENYFAMQSV RAFQYTTEQY RGFIIGHVEN
201: FIKEIYQLGA RKISLTGLPP MGCLPLERAA NMLRGQGDTC SNNYNDCALK FNEMLSALIQ KLNKELPGIR IAFANPYGII LQMVQNPASF GFEVARIACC
301: GTGLFEMSYL CNKLNPLTCP DPNKYVFWDS FHLTQKTNQI ITNSLMKNVL HQFV

Best Arabidopsis Sequence Match ( AT2G04570.1 )
(BLAST)

001: MGHLKSLFTI LFLIAMSSTV TFAGKIPAII VFGDSSVDAG NNNYIPTVAR SNFEPYGRDF VGGKPTGRFC NGKIATDFMS EALGLKPIIP AYLDPSYNIS
101: DFATGVTFAS AATGYDNATS DVLSVLPLWK QLEYYKEYQT KLKAYQGKDR GTETIESSLY LISIGTNDFL ENYFAFPGRS SQYSVSLYQD FLAGIAKEFV
201: KKLHGLGARK ISLGGLPPMG CMPLERATNI GTGGECVGRY NDIAVQFNSK LDKMVEKLSK ELPGSNLVFS NPYEPFMRII KNPSSFGFEV VGAACCATGM
301: FEMGYGCQRN NPFTCTNADK YVFWDSFHPT QKTNHIMANA LMNSTFPHFL

Arabidopsis Description

GDSL esterase/lipase At2g04570 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJB4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.