Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 6
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G172800.1 | Wheat | extracellular, vacuole | 93.35 | 98.83 |
| TraesCS6B01G200400.1 | Wheat | extracellular, plastid | 93.63 | 98.26 |
| HORVU6Hr1G035210.2 | Barley | cytosol, peroxisome | 96.4 | 86.14 |
| Os02t0189300-01 | Rice | endoplasmic reticulum, extracellular | 77.56 | 76.92 |
| Zm00001d015637_P001 | Maize | extracellular | 75.35 | 75.77 |
| OQU84537 | Sorghum | endoplasmic reticulum, extracellular | 74.52 | 75.56 |
| TraesCS7D01G384600.1 | Wheat | endoplasmic reticulum, extracellular, golgi | 65.93 | 65.38 |
| GSMUA_Achr7P05490_001 | Banana | endoplasmic reticulum, extracellular | 61.22 | 62.78 |
| GSMUA_Achr3P13030_001 | Banana | endoplasmic reticulum, golgi | 59.0 | 60.34 |
| KRH14826 | Soybean | endoplasmic reticulum, extracellular | 51.25 | 53.47 |
| KRH46013 | Soybean | extracellular | 51.8 | 53.43 |
| VIT_19s0090g01160.t01 | Wine grape | extracellular, golgi | 50.69 | 53.2 |
| KRH73314 | Soybean | endoplasmic reticulum, extracellular | 51.52 | 53.14 |
| AT4G26790.1 | Thale cress | extracellular, golgi | 51.52 | 52.99 |
| AT2G42990.1 | Thale cress | extracellular | 50.97 | 52.57 |
| Bra004735.1-P | Field mustard | extracellular | 49.03 | 52.52 |
| Bra026402.1-P | Field mustard | extracellular | 50.97 | 52.42 |
| CDX89302 | Canola | extracellular | 50.97 | 52.42 |
| KRG98969 | Soybean | extracellular | 51.25 | 52.26 |
| CDY29250 | Canola | extracellular | 50.69 | 52.14 |
| PGSC0003DMT400001828 | Potato | extracellular | 50.69 | 51.84 |
| Solyc07g049430.2.1 | Tomato | extracellular | 50.14 | 51.27 |
| CDY55498 | Canola | extracellular, plasma membrane | 49.58 | 51.14 |
| Solyc07g049440.2.1 | Tomato | extracellular | 50.14 | 51.13 |
| TraesCS3D01G002900.1 | Wheat | plastid | 50.69 | 51.12 |
| CDY53653 | Canola | extracellular, plasma membrane | 49.31 | 50.86 |
| PGSC0003DMT400038810 | Potato | extracellular | 49.58 | 50.56 |
| PGSC0003DMT400001826 | Potato | endoplasmic reticulum, extracellular, vacuole | 49.31 | 50.0 |
| AT2G04570.1 | Thale cress | extracellular | 48.2 | 49.71 |
| PGSC0003DMT400038808 | Potato | golgi, plasma membrane | 48.75 | 49.44 |
| Solyc05g043330.2.1 | Tomato | plasma membrane | 48.48 | 49.02 |
| KRH14825 | Soybean | nucleus | 48.2 | 48.6 |
| Bra013200.1-P | Field mustard | extracellular | 47.37 | 48.58 |
| CDX93056 | Canola | extracellular | 47.37 | 48.58 |
| TraesCS6D01G162000.3 | Wheat | extracellular, vacuole | 47.65 | 48.31 |
| CDY15057 | Canola | extracellular | 47.09 | 48.3 |
| KRH73315 | Soybean | nucleus | 47.09 | 47.49 |
| KRH17906 | Soybean | endoplasmic reticulum, extracellular | 45.71 | 47.28 |
| TraesCS5D01G169100.1 | Wheat | extracellular, golgi | 46.81 | 47.21 |
| TraesCS5D01G169000.1 | Wheat | extracellular | 44.6 | 45.48 |
| TraesCS5D01G171800.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 44.88 | 44.63 |
| Solyc05g043320.1.1 | Tomato | cytosol | 27.7 | 43.86 |
| TraesCS3D01G345100.1 | Wheat | extracellular | 37.67 | 36.86 |
| TraesCS1D01G138700.1 | Wheat | endoplasmic reticulum, vacuole | 36.29 | 35.12 |
| TraesCS2D01G476600.1 | Wheat | mitochondrion | 34.63 | 33.42 |
| TraesCS5D01G566800.1 | Wheat | endoplasmic reticulum, golgi | 33.8 | 32.88 |
| TraesCS1D01G297500.1 | Wheat | endoplasmic reticulum, vacuole | 33.52 | 32.88 |
| TraesCS7D01G004200.1 | Wheat | mitochondrion | 20.22 | 32.44 |
| TraesCS1D01G322600.1 | Wheat | mitochondrion, plastid | 35.18 | 32.23 |
| TraesCS7D01G347000.1 | Wheat | extracellular | 30.47 | 31.43 |
| TraesCS3D01G341900.1 | Wheat | mitochondrion, plasma membrane | 34.63 | 31.25 |
| TraesCS6D01G093000.1 | Wheat | extracellular, plasma membrane | 31.02 | 30.6 |
| TraesCS2D01G278500.1 | Wheat | plasma membrane, vacuole | 29.64 | 30.48 |
| TraesCS7D01G346700.1 | Wheat | extracellular | 29.64 | 30.14 |
| TraesCS7D01G346900.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 19.94 | 30.0 |
| TraesCS6D01G002800.1 | Wheat | mitochondrion | 33.52 | 29.58 |
| TraesCS5D01G566700.1 | Wheat | mitochondrion | 32.41 | 29.03 |
| VIT_12s0059g01590.t01 | Wine grape | extracellular | 52.35 | 28.72 |
| TraesCS6D01G030700.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 32.41 | 21.87 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G161900.1 | EnsemblPlantsGene:TraesCS6D01G161900 | Gene3D:3.40.50.1110 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016787 |
| GO:GO:0016788 | InterPro:GDSL | InterPro:IPR036514 | InterPro:SGNH_hydro_sf | InterPro:SGNH_plant_lipase_like | PANTHER:PTHR22835 |
| PANTHER:PTHR22835:SF336 | PFAM:PF00657 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF52266 | TIGR:cd01837 |
| TMHMM:TMhelix | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr6D:-:140153732..140156213
Molecular Weight (calculated)
39061.0 Da
IEP (calculated)
5.076
GRAVY (calculated)
0.095
Length
361 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGHFQVEA ALLMLPLVML VLNSGGGSAA GAVVPAVIVF GDSTVDTGNN NHIGTTLRSD FPPYGRDMPG GARATGRFGN GRLPPDFISE ALGLPPLVPA
101: YLDPAYGIGD FARGVCFASA GTGVDNATAG VLSVIPLWKE VEYYKEYQLR LRAYAGAERA RAIVRGALHV VSIGTNDFLE NYYMLGTGRF AEYTVAEFSD
201: FLVAGARRFL SEIHRLGARR VTFAGLAAIG CLPLERAENM IHGGGCIEEY NRVAREYNAK VEAMLGGLRA ELPDLRLAYV PVYDTMLDLV TNPAKFGLEN
301: VEEGCCATGR FEMGFMCNDE APMTCADADK FLFWDAFHPT QKVNRIMANH TIDICYQQGL L
101: YLDPAYGIGD FARGVCFASA GTGVDNATAG VLSVIPLWKE VEYYKEYQLR LRAYAGAERA RAIVRGALHV VSIGTNDFLE NYYMLGTGRF AEYTVAEFSD
201: FLVAGARRFL SEIHRLGARR VTFAGLAAIG CLPLERAENM IHGGGCIEEY NRVAREYNAK VEAMLGGLRA ELPDLRLAYV PVYDTMLDLV TNPAKFGLEN
301: VEEGCCATGR FEMGFMCNDE APMTCADADK FLFWDAFHPT QKVNRIMANH TIDICYQQGL L
001: MQRNRVLAFL LLAAQLLVKI PETCAKFPAL IVFGDSTVDS GNNNQISTVL KSNFQPYGRD YFDGKATGRF SNGRIAPDFI SEGLGLKNAV PAYLDPAYNI
101: ADFATGVCFA SAGTGLDNAT SAVLSVMPLW KEVEYYKEYQ TRLRSYLGEE KANEIISESL YLISIGTNDF LENYYLLPRK LRKYSVNEYQ YFLIGIAADF
201: VTDIYRLGAR KMSLSGLSPF GCLPLERTTQ LFYGSKCIEE YNIVARDFNI KMEEKVFQLN RDLNGIQLVF SNPYDLVSEI IYHPEAFGFE NVRSACCGTG
301: YYEMSYLCDK MNPFTCSDAS KYVFWDSFHP TEKTNAIVAN HVLKYDLSRF Q
101: ADFATGVCFA SAGTGLDNAT SAVLSVMPLW KEVEYYKEYQ TRLRSYLGEE KANEIISESL YLISIGTNDF LENYYLLPRK LRKYSVNEYQ YFLIGIAADF
201: VTDIYRLGAR KMSLSGLSPF GCLPLERTTQ LFYGSKCIEE YNIVARDFNI KMEEKVFQLN RDLNGIQLVF SNPYDLVSEI IYHPEAFGFE NVRSACCGTG
301: YYEMSYLCDK MNPFTCSDAS KYVFWDSFHP TEKTNAIVAN HVLKYDLSRF Q
Arabidopsis Description
GDSL esterase/lipase At4g26790 [Source:UniProtKB/Swiss-Prot;Acc:Q8VY93]
SUBAcon: [golgi,extracellular]
SUBAcon: [golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.