Factsheet for TraesCS6D01G030700.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 3
golgi 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G027000.1	Wheat	extracellular, plasma membrane, vacuole	94.95	96.76
TraesCS6B01G038200.1	Wheat	endoplasmic reticulum, extracellular	92.52	95.38
HORVU0Hr1G014960.1	Barley	cytosol, mitochondrion	70.65	81.64
Os02t0110000-01	Rice	endoplasmic reticulum, extracellular, vacuole	61.87	73.07
TraesCS7D01G004200.1	Wheat	mitochondrion	22.8	54.22
KRH10966	Soybean	extracellular	26.54	39.89
Bra022002.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	25.23	39.13
KRH21335	Soybean	extracellular, golgi	26.36	38.84
CDX87749	Canola	extracellular	25.23	37.82
CDY50487	Canola	extracellular	25.23	37.82
AT5G45950.1	Thale cress	extracellular, plasma membrane	25.23	37.82
PGSC0003DMT400027838	Potato	extracellular	24.67	36.87
TraesCS3D01G002900.1	Wheat	plastid	24.67	36.87
VIT_10s0003g00620.t01	Wine grape	mitochondrion	28.6	36.69
Solyc02g077330.2.1	Tomato	extracellular, golgi	24.49	36.39
TraesCS5D01G169100.1	Wheat	extracellular, golgi	23.74	35.47
TraesCS5D01G171800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	23.55	34.71
TraesCS3D01G345100.1	Wheat	extracellular	23.93	34.69
TraesCS6D01G162000.3	Wheat	extracellular, vacuole	22.8	34.27
TraesCS5D01G169000.1	Wheat	extracellular	22.62	34.18
TraesCS7D01G384600.1	Wheat	endoplasmic reticulum, extracellular, golgi	22.99	33.79
TraesCS6D01G093000.1	Wheat	extracellular, plasma membrane	22.62	33.06
TraesCS1D01G297500.1	Wheat	endoplasmic reticulum, vacuole	22.62	32.88
TraesCS2D01G476600.1	Wheat	mitochondrion	22.8	32.62
TraesCS6D01G161900.1	Wheat	endoplasmic reticulum	21.87	32.41
TraesCS3D01G341900.1	Wheat	mitochondrion, plasma membrane	24.11	32.25
TraesCS5D01G566800.1	Wheat	endoplasmic reticulum, golgi	22.24	32.08
TraesCS1D01G138700.1	Wheat	endoplasmic reticulum, vacuole	22.24	31.9
TraesCS1D01G322600.1	Wheat	mitochondrion, plastid	23.36	31.73
TraesCS7D01G346700.1	Wheat	extracellular	20.93	31.55
TraesCS7D01G347000.1	Wheat	extracellular	20.0	30.57
TraesCS2D01G278500.1	Wheat	plasma membrane, vacuole	20.0	30.48
TraesCS6D01G002800.1	Wheat	mitochondrion	22.99	30.07
TraesCS7D01G346900.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	13.08	29.17
TraesCS5D01G566700.1	Wheat	mitochondrion	21.87	29.03

Protein Annotations

EnsemblPlants:TraesCS6D01G030700.1	EnsemblPlantsGene:TraesCS6D01G030700	Gene3D:3.40.50.1110	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787
GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	PANTHER:PTHR22835
PANTHER:PTHR22835:SF277	PFAM:PF00657	SEG:seg	SignalP:SignalP-noTM	TIGR:cd01837	MapMan:35.1

Description

No Description!

Coordinates

chr6D:-:12309294..12311507

Molecular Weight (calculated)

58921.1 Da

IEP (calculated)

7.373

GRAVY (calculated)

-0.599

Length

535 amino acids

Sequence
(BLAST)

001: MRRPAVVAVA LLLLIAWQPS PGRTAAALDE QDDDPPARSL PPPPDEQDDD PPTRSMPPSS DEQEDNPPVQ SMPPPPSDEQ EDNPPVRSMP PPPSDEQDNP
101: SWPGLPLLPP PPPPEESDAP GVPSLPGSMP PPPPPPAEPA APPTRPRRAR LPPRQDDPPE PEPPELPRHR RTPKDPTPPR TVVPPQEPGW AAVPLPMPPM
201: PAPGRPINYS TTGWTTMLVF GDSTVDPGNN NRLQTMMRAN FLPYGAGFLG GRPTGRFSNG RLITDILAER LGVARSLPGF REPRLRPRQL RRGVSFASAG
301: SGYDDATARI SNTLSFSNQV EDLWRYRRNL QRLVGPRRAG QLLRRATFVI SAGTTDLFNH YLATNRSGTE SWPPYENLLI TRVANYTQAM RALGGRRFVF
401: VGVPPVGCLP LVRTLLGTGA ETCHENMNSM ATSFNRRLGE VVRFLRNQRD IRATFIDVYP IVSMATIDPK NFGLTETSRG CCGTGVIEVG QTCRGRLTCT
501: DPSKYMYWDA VHQTERMNQI ITDYVIMNSI GEIYA

Best Arabidopsis Sequence Match ( AT5G45950.1 )
(BLAST)

001: MLLVAFVTLL VAVALQPLPS VLSLDVHLLR QLAAKHNVTS ILVFGDSSVD PGNNNFIKTE MKGNFPPYGE NFINHKPTGR LCDGLLAPDY IAEAMGYPPI
101: PAFLDPSLTQ ADLTRGASFA SAGSGYDDLT ANISNVWSFT TQANYFLHYK IHLTKLVGPL ESAKMINNAI FLMSMGSNDF LQNYLVDFTR QKQFTVEQYI
201: EFLSHRMLYD AKMLHRLGAK RLVVVGVPPM GCMPLIKYLR GQKTCVDQLN QIAFSFNAKI IKNLELLQSK IGLKTIYVDA YSTIQEAIKN PRKFGFVEAS
301: LGCCGTGTYE YGETCKDMQV CKDPTKYVFW DAVHPTQRMY QIIVKKAIAS ISEEFLV

Arabidopsis Description

GDSL esterase/lipase At5g45950 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ41]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.