Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G030700.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 95.38 | 92.52 |
| TraesCS6A01G027000.1 | Wheat | extracellular, plasma membrane, vacuole | 92.68 | 91.62 |
| HORVU0Hr1G014960.1 | Barley | cytosol, mitochondrion | 71.87 | 80.56 |
| Os02t0110000-01 | Rice | endoplasmic reticulum, extracellular, vacuole | 62.81 | 71.96 |
| KRH10966 | Soybean | extracellular | 27.55 | 40.17 |
| KRH21335 | Soybean | extracellular, golgi | 27.36 | 39.12 |
| Bra022002.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 25.82 | 38.84 |
| CDX87749 | Canola | extracellular | 25.82 | 37.53 |
| CDY50487 | Canola | extracellular | 25.82 | 37.53 |
| AT5G45950.1 | Thale cress | extracellular, plasma membrane | 25.82 | 37.53 |
| PGSC0003DMT400027838 | Potato | extracellular | 25.63 | 37.15 |
| Solyc02g077330.2.1 | Tomato | extracellular, golgi | 25.43 | 36.67 |
| VIT_10s0003g00620.t01 | Wine grape | mitochondrion | 28.9 | 35.97 |
| TraesCS5B01G161700.1 | Wheat | golgi | 24.66 | 35.65 |
| TraesCS3B01G380200.1 | Wheat | plasma membrane | 24.08 | 35.61 |
| TraesCS5B01G164400.1 | Wheat | endoplasmic reticulum, vacuole | 24.86 | 35.44 |
| TraesCS3B01G383600.1 | Wheat | extracellular | 24.28 | 34.71 |
| TraesCS5B01G161500.1 | Wheat | extracellular | 23.51 | 34.46 |
| TraesCS4B01G010200.1 | Wheat | endoplasmic reticulum | 24.08 | 33.78 |
| TraesCS6B01G200400.1 | Wheat | extracellular, plastid | 22.35 | 33.72 |
| TraesCS6B01G200500.1 | Wheat | extracellular, golgi | 23.12 | 33.71 |
| TraesCS7B01G290600.1 | Wheat | golgi | 23.51 | 33.33 |
| TraesCS2B01G500500.1 | Wheat | mitochondrion | 23.7 | 32.89 |
| TraesCS6B01G133500.1 | Wheat | extracellular | 22.93 | 32.78 |
| TraesCS1B01G304400.1 | Wheat | endoplasmic reticulum, extracellular | 22.93 | 32.34 |
| TraesCS5B01G562600.1 | Wheat | golgi, mitochondrion | 22.93 | 32.08 |
| TraesCS1B01G156300.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 22.35 | 31.18 |
| TraesCS5B01G562700.1 | Wheat | golgi | 22.93 | 31.07 |
| TraesCS7B01G250700.1 | Wheat | extracellular, vacuole | 21.0 | 30.88 |
| TraesCS7B01G250800.1 | Wheat | extracellular | 20.62 | 30.57 |
| TraesCS2B01G297300.1 | Wheat | plasma membrane | 20.62 | 30.48 |
| TraesCS6B01G139100.1 | Wheat | extracellular, golgi | 20.04 | 29.63 |
| TraesCS1B01G334900.1 | Wheat | plastid | 24.08 | 29.41 |
| TraesCS6B01G007700.1 | Wheat | plastid | 22.93 | 28.47 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G038200.1 | EnsemblPlantsGene:TraesCS6B01G038200 | Gene3D:3.40.50.1110 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016787 |
| GO:GO:0016788 | InterPro:GDSL | InterPro:IPR036514 | InterPro:SGNH_hydro_sf | InterPro:SGNH_plant_lipase_like | PANTHER:PTHR22835 |
| PANTHER:PTHR22835:SF277 | PFAM:PF00657 | SEG:seg | SignalP:SignalP-noTM | TIGR:cd01837 | MapMan:35.1 |
Description
No Description!
Coordinates
chr6B:-:22556905..22559044
Molecular Weight (calculated)
57271.5 Da
IEP (calculated)
8.352
GRAVY (calculated)
-0.530
Length
519 amino acids
Sequence
(BLAST)
(BLAST)
001: MRRPAVVAVA LLLLVAWQPP PGRTAAALDE QDDDPPAPPP PDERDDDPPA RSMPPPSDEQ DDNPPARSML PPPPPDEQED NPSWPGLPLL PPPPPPEESD
101: APRVPSLPGS MPMPLPPPPP AEPAAPPTRP RRARLPPRQD DPPEPEPPEL PRHRRTPRDP TPPRTVVPPQ EPGWAAVPLP MAPMPAPGRP INYSTTGWTT
201: MLVFGDSTVD PGNNNRLQTV MRANFLPYGA GFLGGRPTGR FSNGRLITDI LAERLGVARS LPGFREPRLR PRQLRRGVSF ASAGSGYDDA TARISNTLSF
301: SNQVEDLWRY RRNLQRLVGP RRARQLLRRA TFVISAGTTD LFNHYLATNR SGTESWLPYE NLLITRVANY TQVMRALGGR RFVFVGVPPV GCLPLVRTLL
401: GTGAETCHEN MNSMATSFNR RLGEVVRFLR NQQDTRATFI DVAPIISMAT IDPKIFGLTE TSRGCCGTGV IEVGQTCRGR LTCTDPSKYM YWDAVHQTER
501: MNEIITDYVI MNSIGEIYA
101: APRVPSLPGS MPMPLPPPPP AEPAAPPTRP RRARLPPRQD DPPEPEPPEL PRHRRTPRDP TPPRTVVPPQ EPGWAAVPLP MAPMPAPGRP INYSTTGWTT
201: MLVFGDSTVD PGNNNRLQTV MRANFLPYGA GFLGGRPTGR FSNGRLITDI LAERLGVARS LPGFREPRLR PRQLRRGVSF ASAGSGYDDA TARISNTLSF
301: SNQVEDLWRY RRNLQRLVGP RRARQLLRRA TFVISAGTTD LFNHYLATNR SGTESWLPYE NLLITRVANY TQVMRALGGR RFVFVGVPPV GCLPLVRTLL
401: GTGAETCHEN MNSMATSFNR RLGEVVRFLR NQQDTRATFI DVAPIISMAT IDPKIFGLTE TSRGCCGTGV IEVGQTCRGR LTCTDPSKYM YWDAVHQTER
501: MNEIITDYVI MNSIGEIYA
001: MKIQILLFAL VLIFVEANAA TQGKNTTIPA LIVFGDSIMD TGNNNNLPTL LKCNFPPYGK DYPGGFATGR FSDGRVPSDL IAEKLGLAKT LPAYMNPYLK
101: PEDLLKGVTF ASGGTGYDPL TAKIMSVISV WDQLINFKEY ISKIKRHFGE EKAKDILEHS FFLVVSSSND LAHTYLAQTH RYDRTSYANF LADSAVHFVR
201: ELHKLGARKI GVFSAVPVGC VPLQRTVFGG FFTRGCNQPL NNMAKQFNAR LSPALDSLDK ELDGVILYIN VYDTLFDMIQ HPKKYGFEVA DRGCCGKGLL
301: AISYLCNSLN PFTCSNSSAY IFWDSYHPSE RAYQVIVDNL LDKYLSKVY
101: PEDLLKGVTF ASGGTGYDPL TAKIMSVISV WDQLINFKEY ISKIKRHFGE EKAKDILEHS FFLVVSSSND LAHTYLAQTH RYDRTSYANF LADSAVHFVR
201: ELHKLGARKI GVFSAVPVGC VPLQRTVFGG FFTRGCNQPL NNMAKQFNAR LSPALDSLDK ELDGVILYIN VYDTLFDMIQ HPKKYGFEVA DRGCCGKGLL
301: AISYLCNSLN PFTCSNSSAY IFWDSYHPSE RAYQVIVDNL LDKYLSKVY
Arabidopsis Description
GDSL esterase/lipase At1g58725 [Source:UniProtKB/Swiss-Prot;Acc:Q3ECM4]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.