Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G295000.1 | Wheat | plastid | 97.55 | 97.55 |
| TraesCS1B01G304400.1 | Wheat | endoplasmic reticulum, extracellular | 95.11 | 95.11 |
| HORVU1Hr1G070790.1 | Barley | extracellular, plastid | 91.3 | 87.96 |
| Zm00001d038411_P001 | Maize | extracellular | 62.23 | 65.43 |
| Os05t0468500-01 | Rice | extracellular | 63.59 | 65.0 |
| Zm00001d010584_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 62.77 | 64.89 |
| OQU78161 | Sorghum | extracellular | 62.77 | 59.54 |
| TraesCS3D01G345100.1 | Wheat | extracellular | 54.35 | 54.2 |
| KRH73274 | Soybean | extracellular | 44.02 | 45.13 |
| GSMUA_Achr6P23650_001 | Banana | extracellular | 41.58 | 43.1 |
| CDY07069 | Canola | plasma membrane | 41.3 | 42.34 |
| Bra017022.1-P | Field mustard | plasma membrane | 41.3 | 42.34 |
| Bra004974.1-P | Field mustard | endoplasmic reticulum, vacuole | 39.13 | 40.11 |
| CDY70930 | Canola | endoplasmic reticulum, vacuole | 39.13 | 40.11 |
| AT2G40250.1 | Thale cress | vacuole | 38.86 | 39.61 |
| TraesCS5D01G169000.1 | Wheat | extracellular | 36.96 | 38.42 |
| TraesCS6D01G162000.3 | Wheat | extracellular, vacuole | 35.05 | 36.24 |
| TraesCS5D01G169100.1 | Wheat | extracellular, golgi | 34.51 | 35.47 |
| TraesCS3D01G341900.1 | Wheat | mitochondrion, plasma membrane | 38.32 | 35.25 |
| TraesCS1D01G138700.1 | Wheat | endoplasmic reticulum, vacuole | 35.33 | 34.85 |
| TraesCS5D01G171800.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 34.24 | 34.71 |
| TraesCS3D01G002900.1 | Wheat | plastid | 33.7 | 34.64 |
| TraesCS6D01G161900.1 | Wheat | endoplasmic reticulum | 32.88 | 33.52 |
| TraesCS2D01G476600.1 | Wheat | mitochondrion | 33.97 | 33.42 |
| TraesCS7D01G384600.1 | Wheat | endoplasmic reticulum, extracellular, golgi | 32.34 | 32.69 |
| TraesCS2D01G278500.1 | Wheat | plasma membrane, vacuole | 30.98 | 32.48 |
| TraesCS7D01G347000.1 | Wheat | extracellular | 30.43 | 32.0 |
| TraesCS7D01G346700.1 | Wheat | extracellular | 29.89 | 30.99 |
| TraesCS5D01G566800.1 | Wheat | endoplasmic reticulum, golgi | 30.98 | 30.73 |
| TraesCS7D01G004200.1 | Wheat | mitochondrion | 18.75 | 30.67 |
| TraesCS6D01G093000.1 | Wheat | extracellular, plasma membrane | 30.43 | 30.6 |
| TraesCS1D01G322600.1 | Wheat | mitochondrion, plastid | 32.61 | 30.46 |
| TraesCS7D01G346900.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 19.57 | 30.0 |
| TraesCS6D01G002800.1 | Wheat | mitochondrion | 31.52 | 28.36 |
| TraesCS5D01G566700.1 | Wheat | mitochondrion | 30.98 | 28.29 |
| TraesCS6D01G030700.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 32.88 | 22.62 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G297500.1 | EnsemblPlantsGene:TraesCS1D01G297500 | Gene3D:3.40.50.1110 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016787 |
| GO:GO:0016788 | InterPro:GDSL | InterPro:IPR036514 | InterPro:SGNH_hydro_sf | InterPro:SGNH_plant_lipase_like | ncoils:Coil |
| PANTHER:PTHR22835 | PANTHER:PTHR22835:SF305 | PFAM:PF00657 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF52266 |
| TIGR:cd01837 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr1D:-:395880844..395882034
Molecular Weight (calculated)
38902.6 Da
IEP (calculated)
7.550
GRAVY (calculated)
0.035
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPPSLAPAA ALFLAALLLL SASPASAARP RSSSKAAAGP HDIPAVFAFG DSTLDPGNNN RLPTVVRADH APYGRAFPAG VPPSGRFSDG KLITDYIVAA
101: LGIKDLLPAY HASGVTHANA TTGASFASGG SGLDDMTAHA VMVSTFSSQI ADFQQLLSRI GEPQAADIAA KSLFILSAGT NDVTMNYYDL PFRALEYPTI
201: DAYHDYLISR YQSYIQSLYK LGARRFIVAG MPPVGCLPMQ KSLRGQQPPL GHGCVDLQNE EVQRYNAKLQ QALAALEAAS AGASISYVDT YAPLMDMVAQ
301: PKKYGFTQTG QGCCGTGLLE MGAMCTGLLP QCKSPAQYMF FDAVHPTQAA YKAVADQIIK THIAQFKN
101: LGIKDLLPAY HASGVTHANA TTGASFASGG SGLDDMTAHA VMVSTFSSQI ADFQQLLSRI GEPQAADIAA KSLFILSAGT NDVTMNYYDL PFRALEYPTI
201: DAYHDYLISR YQSYIQSLYK LGARRFIVAG MPPVGCLPMQ KSLRGQQPPL GHGCVDLQNE EVQRYNAKLQ QALAALEAAS AGASISYVDT YAPLMDMVAQ
301: PKKYGFTQTG QGCCGTGLLE MGAMCTGLLP QCKSPAQYMF FDAVHPTQAA YKAVADQIIK THIAQFKN
001: MSTSKTITFT LFIAALLSSC DAATNATSQP LFPAILIFGD STVDTGNNNY HSQTIFKAKH LPYGIDLPNH KASGRFTNGK IFSDIIATKL NIKQFVPPFL
101: QPNLSDQEIV TGVCFASAGA GYDDHTSLST QAIRVLDQQK MFKNYIARLK SIVGDKKAME IIKNALVVIS AGPNDFILNY YDIPSRRLEF PHISGYQDFV
201: LQRLDNFVRE LYSLGCRKIM VGGLPPMGCL PIQMTAKFRN ALRFCLEQEN RDSVLYNQKL QNLLPQIEAS LTGSKILYSN VYDPMMDMMQ NPSKYGFKET
301: KRGCCGTGHL ETSFMCNAFS PTCRNHSEFL FFDSIHPSEA TYNYMGNFLD TQIRVWLSLR LKS
101: QPNLSDQEIV TGVCFASAGA GYDDHTSLST QAIRVLDQQK MFKNYIARLK SIVGDKKAME IIKNALVVIS AGPNDFILNY YDIPSRRLEF PHISGYQDFV
201: LQRLDNFVRE LYSLGCRKIM VGGLPPMGCL PIQMTAKFRN ALRFCLEQEN RDSVLYNQKL QNLLPQIEAS LTGSKILYSN VYDPMMDMMQ NPSKYGFKET
301: KRGCCGTGHL ETSFMCNAFS PTCRNHSEFL FFDSIHPSEA TYNYMGNFLD TQIRVWLSLR LKS
Arabidopsis Description
GDSL esterase/lipase At2g24560 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJA9]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.